#massspectrometry — Public Fediverse posts

Pipeline release! nf-core/mhcquant v3.3.0 - 3.3.0 - Favorite!
Identify and quantify MHC eluted peptides from mass spectrometry raw data
Please see the changelog: https://github.com/nf-core/mhcquant/releases/tag/3.3.0

#dda #immunopeptidomics #massspectrometry #mhc #openms #peptides #nfcore #openscience #nextflow #bioinformatics

🧪 Join the 8th International Mass Spectrometry School (IMSS 2027) in Alghero, Sardinia 🇮🇹, 19–24 September 2027

6 days covering fundamentals, cutting-edge advances, instrumentation & applications — from ionization and high-resolution MS to ion mobility, AI/ML, imaging, omics, and more.

🎓 For graduate & PhD students, postdocs, researchers and industry scientists

🔗 https://www.chemistryviews.org/8th-international-mass-spectrometry-school-imss/

#MassSpec #Chemistry #AnalyticalChemistry #MassSpectrometry #PhD #Chemists

https://www.europesays.com/ie/694068/ Researchers mine cobra toxins to uncover a membrane-disrupting antimicrobial peptide #AntimicrobialDrug #Assay #bacteria #Bacterial #BioactivePeptide #DrugDiscovery #Éire #Health #IE #Ireland #MachineLearning #MassSpectrometry #Membrane #Microscopy #peptides #Protein #Snake #Spectrometry #Toxin #toxins #Venom

New publication: FERMO: A Dashboard for #Biochemometric Prioritization of #Molecular Features from Mass Spectral Data. #massspectrometry #metabolomics
https://doi.org/10.1021/acsmeasuresciau.6c00022

🤖 Are we overestimating AI’s ability to predict peptide detectability?

🔗 The State of Peptide Detectability in Computational Proteomics and Guidelines for AI Applications. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0037

📚 CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#Proteomics #ArtificialIntelligence #MachineLearning #DeepLearning #MassSpectrometry #ComputationalProteomics #Bioinformatics #PeptideDetectability #AIinScience

https://www.europesays.com/ch/128397/ Palani Kumaresan: Roche Diagnostics Is Ramping Up—Should Illumina Be Worried? #Alzheimer'sDisease #ArtificialIntelligence #Axelios #BehindTheBreakthroughs #biomarkers #dementia #GeniaTechnologies #HumanGenome #illumina #MachineLearning #MassSpectrometry #MolecularDx #multimedia #NextGenerationSequencing(sequencing) #NVIDIA #Podcasts #PrecisionMedicine #Roche #RocheDiagnostics #topics #TranslationalResearch

FDA clears innovative blood test for earlier Alzheimer’s diagnosis

The U.S. Food and Drug Administration (FDA) has cleared for marketing an innovative blood test with underlying technology…
#NewsBeep #News #Health #Alzheimer'sDisease #AU #Australia #Biomarker #Blood #BloodTest #Brain #Cancer #Diagnostic #Diagnostics #Drugs #food #Healthcare #Immunoassay #MassSpectrometry #medicine #Neurology #Pathology #research #Spectrometry #Technology #therapy
https://www.newsbeep.com/au/863932/

https://www.europesays.com/ie/650092/ FDA clears innovative blood test for earlier Alzheimer’s diagnosis #Alzheimer'sDisease #Biomarker #blood #BloodTest #Brain #cancer #Diagnostic #Diagnostics #Drugs #Éire #food #Health #Healthcare #IE #Immunoassay #Ireland #MassSpectrometry #medicine #neurology #Pathology #Research #Spectrometry #Technology #therapy

Early-life stress rewires brain epigenetics to heighten sensitivity to future stress

Mouse experiments reveal how early-life stress may leave a lasting epigenetic imprint in dopamine-related brain circuitry, priming molecular,…
#NewsBeep #News #Health #AU #Australia #Brain #Cell #Chromatin #Dopamine #Electrophysiology #Epigenetics #Gene #GeneExpression #Genes #Lysine #MassSpectrometry #Neuron #Neurons #promoter #protein #research #RNA #Spectrometry #stress
https://www.newsbeep.com/au/851258/

https://www.europesays.com/ie/631064/ Early-life stress rewires brain epigenetics to heighten sensitivity to future stress #Brain #Cell #Chromatin #Dopamine #Éire #electrophysiology #Epigenetics #Gene #GeneExpression #Genes #Health #IE #Ireland #Lysine #MassSpectrometry #Neuron #Neurons #Promoter #Protein #Research #RNA #Spectrometry #Stress

https://www.europesays.com/ie/618150/ New analytical strategies can measure thousands of gut microbial proteins #digestion #DNA #DNASequencing #Éire #Health #IE #immunity #inflammation #Ireland #Laboratory #MassSpectrometry #Metabolism #Metaproteomics #Microbiome #Research #Spectrometry

https://www.europesays.com/ch/106626/ Roche Shows FDA-Cleared Alzheimer’s Test at ADLM #ADLM2026 #Alzheimer’sBloodTest #diagnostics #DigitalPathology #MassSpectrometry #NextGenerationSequencing #RHHBY #Roche

https://www.europesays.com/ie/594432/ AI may predict harmful chemical exposures affecting human health #ArtificialIntelligence #chemicals #Éire #Health #IE #Ireland #MassSpectrometry #Research #Spectrometry #toxicology

https://www.europesays.com/at/276124/ Cu(ATSM) liefert Kupfer und stabilisiert P-Glycoprotein – Hoffnung für Alzheimer-Therapie #AI #Alzheimer #Amyloid #AnimalModel #ARTIFICIALINTELLIGENCE #AT #Austria #Biomarker #BloodBrainBarrier #Cognition #copper #Drug #Ferroptosis #Gehirn #Geist #Gesundheit #Health #KI #KünstlicheIntelligenz #MassSpectrometry #Microglia #Neurologie #Neuroscience #Neurowissenschaften #Österreich #PGlycoprotein #PetImaging

Novogene Europe launches Untargeted Metabolomics Service at Cambridge Omics Centre

Novogene Europe, a multiomics research services partner, today announced that it has strengthened its position as a multiomics…
#NewsBeep #News #Health #AU #Australia #bioinformatics #Genomics #Lifescience #MassSpectrometry #Metabolite #Metabolomics #Microbiome #Molecule #Multiomics #Phenotype #research #Spectrometry #Transcriptomics
https://www.newsbeep.com/au/797668/

https://www.europesays.com/uk/1086529/ Novogene Europe launches Untargeted Metabolomics Service at Cambridge Omics Centre #Bioinformatics #EU #Europe #European #Genomics #LifeScience #MassSpectrometry #Metabolite #metabolomics #Microbiome #Molecule #Multiomics #Phenotype #Research #Spectrometry #Transcriptomics

https://www.europesays.com/ie/563745/ New bacterial enzyme blueprint could accelerate cancer treatment development #bacteria #Bacterial #blood #BloodCancer #cancer #CancerTreatment #Drugs #Éire #Enzyme #Gene #Health #IE #Ireland #MassSpectrometry #Protein #Research #Romidepsin #Spectrometry

https://www.europesays.com/at/232877/ Abatacept senkt Arthritis-Risiko: Protein-Atlanten und KI ebnen personalisierte Prävention #Abatacept #AI #Arthritis #ARTIFICIALINTELLIGENCE #AT #Austria #Biomarker #Disease #Gesundheit #Health #Immunotherapy #KI #KünstlicheIntelligenz #MassSpectrometry #Microfluidics #Molecular #Österreich #Proteomics #Risk

Proteomics Specialist, Human technopole
Human Technopole

See the full job description on jobRxiv: https://jobrxiv.org/job/human-technopole-27778-proteomics-specialist-human-technopole-2/

#corefacility #massspectrometry #msproteomics #proteomics #spatialproteomics #ScienceJobs #hiring #research
https://jobrxiv.org/job/human-technopole-27778-proteomics-specialist-human-technopole-2/?fsp_sid=12907

https://www.europesays.com/ie/528671/ Advancing Cushing’s syndrome diagnosis #Biochemistry #blood #ClinicalDiagnostics #Cortisol #Cortisone #Cushing’sSyndrome #Dexamethasone #Diagnostic #Diagnostics #Éire #Endocrine #endocrinology #Health #Healthcare #Hormone #hormones #hospital #IE #Ireland #MassSpectrometry #Research #Spectrometry #Steroid #Syndrome

Traveling today to San Diego, to give the closing plenary at the @[email protected] #ASMS2026 #MassSpectrometry meeting. I am not aware of a lot of MS fraud, and would have a hard time finding it myself, but hopefully we can learn from each other. This might be my biggest audience ever (7K participants)!

RE: https://bsky.app/profile/did:plc:wtkjo7nc6ijkzwp44pqgsvre/post/3mmoupf4fv22c

Traveling today to San Diego, to give the closing plenary at the @[email protected] #ASMS2026 #MassSpectrometry meeting. I am not aware of a lot of MS fraud, and would have a hard time finding it myself, but hopefully we can learn from each other. This might be my biggest audience ever (7K participants)!

RE: https://bsky.app/profile/did:plc:wtkjo7nc6ijkzwp44pqgsvre/post/3mmoupf4fv22c

https://www.europesays.com/at/194684/ STING im Fokus: Neue Mechanik erklärt chronische Entzündung bei Alzheimer #Alzheimer #AT #Austria #Gesundheit #Health #Immune #Inflammation #MassSpectrometry #MouseModel #Neuroinflammation #Nitrosylation #Österreich #Redox #SmallMolecules #Sting #Synapse

New mass spectrometry machine, 2001-03-23

Commissioned by J. Metson and J. Reid Audiovisual Department -- University of Auckland
The University of Auckland Library via DigitalNZ

http://api.digitalnz.org/records/56450134/source

#UniversityOfAuckland #ScientificApparatusAndInstruments #MassSpectrometry #Image #Museums

How NASA Uses Light to Detect Waste From Mines 🌎

#Earth #MassSpectrometry #Rocks/Minerals

▶️ 1 new video from NASA (SVS) https://commons.wikimedia.org/wiki/File:How+NASA+Uses+Light+to+Detect+Waste+From+Mines+%28SVS15042_AMD_YouTube%29.webm

Pipeline release! nf-core/mhcquant v3.2.0 - 3.2.0 - Solitude!
Identify and quantify MHC eluted peptides from mass spectrometry raw data
Please see the changelog: https://github.com/nf-core/mhcquant/releases/tag/3.2.0

#dda #immunopeptidomics #massspectrometry #mhc #openms #peptides #nfcore #openscience #nextflow #bioinformatics

SpecGP as a transformer-based model for predicting energy-adaptable structural spectra of glycopeptides https://www.byteseu.com/2031255/ #Energy #engineering #General #Glycosylation #MachineLearning #MassSpectrometry #Polysaccharides #Proteomics

Health Tests Market in Germany | Report – IndexBox

Germany Health Tests Market 2026 Analysis and Forecast to 2035 Executive Summary Key Fi…
#Germany #DE #Europe #EU #Europa #consumergoodsmarketreport #Fertilityandhormonalcycletracking #forecast #HealthTests #Identifyingfoodintolerances #LateralFlowAssays #marketanalysis #MassSpectrometry #MicroarrayTechnology #Monitoringkeywellnessbiomarkers #Next-GenerationSequencing(NGS) #Personalizednutritionplanning
https://www.europesays.com/germany/13352/

Analytical Chemist
Johns Hopkins University

The McMeniman group at Johns Hopkins is recruiting an analytical chemist to study human scent chemistry scent-based malaria diagnostics.

See the full job description on jobRxiv: https://jobrxiv.org/job/johns-hopkins-university-27778-analytical-chemist/

#Analyticalchemistry #AnalyticalMethodDevelopment #GCMS #LCMS #massspectrometry #ScienceJobs #hiring #resea...
https://jobrxiv.org/job/johns-hopkins-university-27778-analytical-chemist/?fsp_sid=12009

Custom RNA Oligos Market in Italy | Report – IndexBox

Italy Custom RNA Oligos Marke…
#Italy #Europe #Europa #EU #2'-O-methyl) #Antisenseoligonucleotideresearch #biopharmamarketreport #CustomRNAoligos #Diagnosticprobedevelopment #forecast #Geneediting(CRISPRgRNA) #Genesilencing(siRNA #marketanalysis #Massspectrometry(MS)forQC #Modificationchemistry(2'-fluoro #Reverse-phaseandion-exchangeHPLCpurification #RNAi) #Solid-phasephosphoramiditesynthesis
https://www.europesays.com/italy/14486/

Mass Spectrometry Specialist
University of Nebraska Medical Center

Interactomics and Retrotransposons FTW!!

See the full job description on jobRxiv: https://jobrxiv.org/job/university-of-nebraska-medical-center-27778-mass-spectrometry-specialist/

#biochemistry #massspectrometry #proteomics #ScienceJobs #hiring #research
https://jobrxiv.org/job/university-of-nebraska-medical-center-27778-mass-spectrometry-specialist/?fsp_sid=11849

https://www.europesays.com/ie/457420/ Detailed images reveal DNA repair mechanism in cancer-related proteins #cancer #DNA #Éire #Electron #ElectronMicroscopy #Genes #IE #Ireland #MassSpectrometry #Microscopy #Mitochondria #Protein #Research #Science #Spectrometry #Tumor #Yeast

Neat find of the day.

The #RStats package Spectra, + mzR and / or MsBackEndMgf are the easiest way to convert cdf #MassSpectrometry files to either mzML or mgf.

I might have to put those all together in a little docker image just for doing that, as there doesn't seem to be any other good ways to do that (msconvert apparently doesn't do cdf files).

Mass Spectrometry Specialist
University of Nebraska Medical Center

Interactomics and Retrotransposons FTW!!

See the full job description on jobRxiv: https://jobrxiv.org/job/university-of-nebraska-medical-center-27778-mass-spectrometry-specialist/

#biochemistry #massspectrometry #proteomics #ScienceJobs #hiring #research
https://jobrxiv.org/job/university-of-nebraska-medical-center-27778-mass-spectrometry-specialist/?fsp_sid=11097

Mass Spectrometry Specialist
University of Nebraska Medical Center

See the full job description on jobRxiv: https://jobrxiv.org/job/university-of-nebraska-medical-center-27778-mass-spectrometry-specialist/

#biochemistry #massspectrometry #proteomics #ScienceJobs #hiring #research
https://jobrxiv.org/job/university-of-nebraska-medical-center-27778-mass-spectrometry-specialist/?fsp_sid=11081

Analytical Chemist
Johns Hopkins University

The McMeniman group at Johns Hopkins is recruiting an analytical chemist to study human scent chemistry scent-based malaria diagnostics.

See the full job description on jobRxiv: https://jobrxiv.org/job/johns-hopkins-university-27778-analytical-chemist/

#Analyticalchemistry #AnalyticalMethodDevelopment #GCMS #LCMS #massspectrometry #ScienceJobs #hiring #resea...
https://jobrxiv.org/job/johns-hopkins-university-27778-analytical-chemist/?fsp_sid=10281

Postdoctoral researcher in Membrane protein chemistry
Georgia Institute of Technology

See the full job description on jobRxiv: https://jobrxiv.org/job/georgia-institute-of-technology-27778-postdoctoral-researcher-in-membrane-protein-chemistry/

#andProteinBiochemistry #cytochromep450 #enzymology #HPLC #massspectrometry #metalloenzymes #ScienceJobs #hiring #resea...
https://jobrxiv.org/job/georgia-institute-of-technology-27778-postdoctoral-researcher-in-membrane-protein-chemistry/?fsp_sid=10233

Analytical Chemist
Johns Hopkins University

The McMeniman group at Johns Hopkins is recruiting an analytical chemist to study human scent chemistry scent-based malaria diagnostics.

See the full job description on jobRxiv: https://jobrxiv.org/job/johns-hopkins-university-27778-analytical-chemist/

#Analyticalchemistry #AnalyticalMethodDevelopment #GCMS #LCMS #massspectrometry #ScienceJobs #hiring #resear...
https://jobrxiv.org/job/johns-hopkins-university-27778-analytical-chemist/?fsp_sid=9524

RE: https://mas.to/@kakape/116054339177325824

What a wild conclusion to the famous #COVID19 #vaccine side effects, a great scientific success in making them safe, and how cool to see that #proteomics #massspectrometry played a key role

Pipeline release! nf-core/mhcquant v3.1.0 - 3.1.0 - BlüBa!
Identify and quantify MHC eluted peptides from mass spectrometry raw data
Please see the changelog: https://github.com/nf-core/mhcquant/releases/tag/3.1.0

#dda #immunopeptidomics #massspectrometry #mhc #openms #peptides #nfcore #openscience #nextflow #bioinformatics

Postdoctoral scholar, Biochemistry of the eye
Emory University

See the full job description on jobRxiv: https://jobrxiv.org/job/emory-university-27778-postdoctoral-scholar-biochemistry-of-the-eye/

#agerelateddisease #biochemistry #massspectrometry #visionscience #ScienceJobs #hiring #research
https://jobrxiv.org/job/emory-university-27778-postdoctoral-scholar-biochemistry-of-the-eye/?fsp_sid=7382

Interesting interview with Matthias Mann. He talks about the big advances of proteomics over the last 25 years and about his outlook for the future. Great to see him highlight the unique potential of proteomics to detect protein modifications.

https://www.genomeweb.com/proteomics-protein-research/qa-matthias-mann-history-future-potential-proteomics
#Chemistry #MS #ChemBio #PTMs #Proteomics #MassSpectrometry

Postdoctoral scholar, Biochemistry of the eye
Emory University

See the full job description on jobRxiv: https://jobrxiv.org/job/emory-university-27778-postdoctoral-scholar-biochemistry-of-the-eye/

#agerelateddisease #biochemistry #massspectrometry #visionscience #ScienceJobs #hiring #research
https://jobrxiv.org/job/emory-university-27778-postdoctoral-scholar-biochemistry-of-the-eye/?fsp_sid=7046

🎁 Season’s Greetings & Gratitude

Thanks for choosing us in 2025.
Wishing you a peaceful holiday season and a successful new year — from our team to yours!

#mswil #proteomics #LCMS #MassSpec #MassSpectrometry
#Proteomics #Chemistry #BioMedical #Pharmancy #Metabolomics #Physics #MSWil #MakingScienceWork

Postdoctoral scholar, Biochemistry of the eye
Emory University

See the full job description on jobRxiv: https://jobrxiv.org/job/emory-university-27778-postdoctoral-scholar-biochemistry-of-the-eye/

#agerelateddisease #biochemistry #massspectrometry #visionscience #ScienceJobs #hiring #research
https://jobrxiv.org/job/emory-university-27778-postdoctoral-scholar-biochemistry-of-the-eye/?fsp_sid=6598

Another great session of #PosterPitches at #NWOCHAINS. We learned about a huge diversity of topics including #SupramoecularAssemblies, #biomarker #sensing, #Ion-selective #membranes, radical #polymerization and #MassSpectrometry.

The poster pitches at #NWOCHAINS were an absolute firework of great science. We learned about #antivirals, #organocatalysis, #MolecularMotors, #EnzymeEngineering, #photocontrol, #odor detection, sensing of #bacteria, #recycling, #batteries, #QuantumDots, #vitrimers, #BoneRegeneration, native #MassSpectrometry and #biomaterials. Always one of my highlights of the conference.

#Chemistry #ChemBio #ECR #PosterPitch

Postdoctoral scholar, Biochemistry of the eye
Emory University

See the full job description on jobRxiv: https://jobrxiv.org/job/emory-university-27778-postdoctoral-scholar-biochemistry-of-the-eye/

#agerelateddisease #biochemistry #massspectrometry #visionscience #ScienceJobs #hiring #research
https://jobrxiv.org/job/emory-university-27778-postdoctoral-scholar-biochemistry-of-the-eye/?fsp_sid=5835

Great talk by Cheng Chang at #ISCPDD. He talked about his group’s work on πPrimeNovo for de novo sequencing in mass spectrometry-based #proteomics. He also presented the πHub database of human proteomics data.
https://www.nature.com/articles/s41467-024-55021-3
#MS #MassSpectrometry #DeNovoSequencing

Happy to report that our latest paper is released: https://doi.org/10.1021/acs.analchem.5c02832. About a program I wrote in #rust to annotate spectra with the ability to handle very complex peptide definitions (eg cross-linked, glycans, ambiguous modifications and much more) thanks to ProForma. We think these complex definitions make it functional for many people within the field of mass spec, we use it already for bottom-up, top-down, glycopeptides, XL, and de novo peptides. Additionally it supports reading in many identified peptidoform files (eg MSFragger) to easily visualise data from other sources. The program itself and the underlying libraries are all open source and centered around #ProteomicsStandardsInitiative formats (for now ProForma, mzTab, mzML, mzSpecLib, & mzPAF) for maximum interoperability.
#OpenScience #Proteomics #MassSpectrometry