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#massspectrometry — Public Fediverse posts

Live and recent posts from across the Fediverse tagged #massspectrometry, aggregated by home.social.

  1. Analytical Chemist
    Johns Hopkins University

    The McMeniman group at Johns Hopkins is recruiting an analytical chemist to study human scent chemistry scent-based malaria diagnostics.

    See the full job description on jobRxiv: jobrxiv.org/job/johns-hopkins-

    #Analyticalchemistry #AnalyticalMethodDevelopment #GCMS #LCMS #massspectrometry #ScienceJobs #hiring #resea...
    jobrxiv.org/job/johns-hopkins-

  2. Neat find of the day.

    The #RStats package Spectra, + mzR and / or MsBackEndMgf are the easiest way to convert cdf #MassSpectrometry files to either mzML or mgf.

    I might have to put those all together in a little docker image just for doing that, as there doesn't seem to be any other good ways to do that (msconvert apparently doesn't do cdf files).

  3. Analytical Chemist
    Johns Hopkins University

    The McMeniman group at Johns Hopkins is recruiting an analytical chemist to study human scent chemistry scent-based malaria diagnostics.

    See the full job description on jobRxiv: jobrxiv.org/job/johns-hopkins-

    #Analyticalchemistry #AnalyticalMethodDevelopment #GCMS #LCMS #massspectrometry #ScienceJobs #hiring #resea...
    jobrxiv.org/job/johns-hopkins-

  4. RE: mas.to/@kakape/116054339177325

    What a wild conclusion to the famous #COVID19 #vaccine side effects, a great scientific success in making them safe, and how cool to see that #proteomics #massspectrometry played a key role

  5. Pipeline release! nf-core/mhcquant v3.1.0 - 3.1.0 - BlüBa!
    Identify and quantify MHC eluted peptides from mass spectrometry raw data
    Please see the changelog: github.com/nf-core/mhcquant/re

    #dda #immunopeptidomics #massspectrometry #mhc #openms #peptides #nfcore #openscience #nextflow #bioinformatics

  6. Interesting interview with Matthias Mann. He talks about the big advances of proteomics over the last 25 years and about his outlook for the future. Great to see him highlight the unique potential of proteomics to detect protein modifications.

    genomeweb.com/proteomics-prote
    #Chemistry #MS #ChemBio #PTMs #Proteomics #MassSpectrometry

  7. 🎁 Season’s Greetings & Gratitude

    Thanks for choosing us in 2025.
    Wishing you a peaceful holiday season and a successful new year — from our team to yours!

    #mswil #proteomics #LCMS #MassSpec #MassSpectrometry
    #Proteomics #Chemistry #BioMedical #Pharmancy #Metabolomics #Physics #MSWil #MakingScienceWork

  8. Great talk by Cheng Chang at #ISCPDD. He talked about his group’s work on πPrimeNovo for de novo sequencing in mass spectrometry-based #proteomics. He also presented the πHub database of human proteomics data.
    nature.com/articles/s41467-024
    #MS #MassSpectrometry #DeNovoSequencing

  9. Happy to report that our latest paper is released: doi.org/10.1021/acs.analchem.5. About a program I wrote in #rust to annotate spectra with the ability to handle very complex peptide definitions (eg cross-linked, glycans, ambiguous modifications and much more) thanks to ProForma. We think these complex definitions make it functional for many people within the field of mass spec, we use it already for bottom-up, top-down, glycopeptides, XL, and de novo peptides. Additionally it supports reading in many identified peptidoform files (eg MSFragger) to easily visualise data from other sources. The program itself and the underlying libraries are all open source and centered around #ProteomicsStandardsInitiative formats (for now ProForma, mzTab, mzML, mzSpecLib, & mzPAF) for maximum interoperability.
    #OpenScience #Proteomics #MassSpectrometry

  10. Researchers at our university and Imperial College London have developed a new method for #PathogenDetection. Using #MassSpectrometry, bacteria can now be identified within minutes instead of days, improving diagnosis and treatment: go.tum.de/920285

    📷R. Reich

  11. Researchers at our university and Imperial College London have developed a new method for #PathogenDetection. Using #MassSpectrometry, bacteria can now be identified within minutes instead of days, improving diagnosis and treatment: go.tum.de/920285

    📷R. Reich

  12. Researchers at our university and Imperial College London have developed a new method for #PathogenDetection. Using #MassSpectrometry, bacteria can now be identified within minutes instead of days, improving diagnosis and treatment: go.tum.de/920285

    📷R. Reich

  13. Researchers at our university and Imperial College London have developed a new method for #PathogenDetection. Using #MassSpectrometry, bacteria can now be identified within minutes instead of days, improving diagnosis and treatment: go.tum.de/920285

    📷R. Reich

  14. Researchers at our university and Imperial College London have developed a new method for #PathogenDetection. Using #MassSpectrometry, bacteria can now be identified within minutes instead of days, improving diagnosis and treatment: go.tum.de/920285

    📷R. Reich

  15. Update! The upcoming version of our MsBackendMgf :rstats: @bioconductor package will support import from *annotated* MGF files 🥳

    bit.ly/3FSoTLB

  16. I've been privileged to be able to bring together a group of key opinion leaders in the fields of #ComputationalMassSpectrometry, #Proteomics, and #Metabolomics to discuss future data formats for storing data from #MassSpectrometry experiments. After a lot of deliberation (and a lot of help from Tim Van Den Bossche drafting) we are proud to announce the initial Whitepaper describing goals for the next generation format. This is available on Zenodo at lnkd.in/edhWJ7d4

    Now it's your turn to get involved. We are looking for comment, reviews and thoughts on what we've put together so far. We are looking to use #PreReview as a platform to do this. So, if you work with mass spec data, or know anyone who does, please read the whitepaper, comment on it at
    lnkd.in/efNqu7Z2 and share with your mass spec loving friends. We are hoping to have a first round of discussions based on feedback at the HUPO Proteomics Standards Initiative meeting at the end of March, and publish an updated Whitepaper for more comments from there.

  17. I've been privileged to be able to bring together a group of key opinion leaders in the fields of #ComputationalMassSpectrometry, #Proteomics, and #Metabolomics to discuss future data formats for storing data from #MassSpectrometry experiments. After a lot of deliberation (and a lot of help from Tim Van Den Bossche drafting) we are proud to announce the initial Whitepaper describing goals for the next generation format. This is available on Zenodo at lnkd.in/edhWJ7d4

    Now it's your turn to get involved. We are looking for comment, reviews and thoughts on what we've put together so far. We are looking to use #PreReview as a platform to do this. So, if you work with mass spec data, or know anyone who does, please read the whitepaper, comment on it at
    lnkd.in/efNqu7Z2 and share with your mass spec loving friends. We are hoping to have a first round of discussions based on feedback at the HUPO Proteomics Standards Initiative meeting at the end of March, and publish an updated Whitepaper for more comments from there.

  18. I've been privileged to be able to bring together a group of key opinion leaders in the fields of #ComputationalMassSpectrometry, #Proteomics, and #Metabolomics to discuss future data formats for storing data from #MassSpectrometry experiments. After a lot of deliberation (and a lot of help from Tim Van Den Bossche drafting) we are proud to announce the initial Whitepaper describing goals for the next generation format. This is available on Zenodo at lnkd.in/edhWJ7d4

    Now it's your turn to get involved. We are looking for comment, reviews and thoughts on what we've put together so far. We are looking to use #PreReview as a platform to do this. So, if you work with mass spec data, or know anyone who does, please read the whitepaper, comment on it at
    lnkd.in/efNqu7Z2 and share with your mass spec loving friends. We are hoping to have a first round of discussions based on feedback at the HUPO Proteomics Standards Initiative meeting at the end of March, and publish an updated Whitepaper for more comments from there.

  19. I've been privileged to be able to bring together a group of key opinion leaders in the fields of #ComputationalMassSpectrometry, #Proteomics, and #Metabolomics to discuss future data formats for storing data from #MassSpectrometry experiments. After a lot of deliberation (and a lot of help from Tim Van Den Bossche drafting) we are proud to announce the initial Whitepaper describing goals for the next generation format. This is available on Zenodo at lnkd.in/edhWJ7d4

    Now it's your turn to get involved. We are looking for comment, reviews and thoughts on what we've put together so far. We are looking to use #PreReview as a platform to do this. So, if you work with mass spec data, or know anyone who does, please read the whitepaper, comment on it at
    lnkd.in/efNqu7Z2 and share with your mass spec loving friends. We are hoping to have a first round of discussions based on feedback at the HUPO Proteomics Standards Initiative meeting at the end of March, and publish an updated Whitepaper for more comments from there.

  20. I've been privileged to be able to bring together a group of key opinion leaders in the fields of #ComputationalMassSpectrometry, #Proteomics, and #Metabolomics to discuss future data formats for storing data from #MassSpectrometry experiments. After a lot of deliberation (and a lot of help from Tim Van Den Bossche drafting) we are proud to announce the initial Whitepaper describing goals for the next generation format. This is available on Zenodo at lnkd.in/edhWJ7d4

    Now it's your turn to get involved. We are looking for comment, reviews and thoughts on what we've put together so far. We are looking to use #PreReview as a platform to do this. So, if you work with mass spec data, or know anyone who does, please read the whitepaper, comment on it at
    lnkd.in/efNqu7Z2 and share with your mass spec loving friends. We are hoping to have a first round of discussions based on feedback at the HUPO Proteomics Standards Initiative meeting at the end of March, and publish an updated Whitepaper for more comments from there.