#wholegenomesequencing — Public Fediverse posts

🐁 Could long-read whole-genome sequencing reveal hidden errors in genetically engineered animal models?

🔗 Unbiased Long-Read Whole-Genome Sequencing Enables High-Resolution Mapping of Transgene Concatenation and Off-target Genomic Disruption in a Mouse Model. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0234

📚 CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#WholeGenomeSequencing #Genomics #GeneticEngineering #TransgenicModels #GenomeEditing

Advancing whole-genome sequencing

Sponsored Content by Illumina, Inc.Reviewed by Olivia FrostSep 10 2026 Illumina TruPathTM Genome revolutionizes whole-genome sequencing (WGS) by…
#NewsBeep #News #Technology #AU #Australia #WholeGenomeSequencing
https://www.newsbeep.com/au/886888/

https://www.europesays.com/ie/681882/ Advancing whole-genome sequencing #Éire #IE #Ireland #Technology #WholeGenomeSequencing

Q&A: EFSA Explains New EU WGS Data-Sharing Requirements for Foodborne Illness Outbreaks

On August 23, 2026, Regulation (EU) 2025/179 went into effect, requiring EU Member States to conduct whole genome…
#Europe #EU #datasharing #ECDC #EFSA #EuropeanUnion #foodborneillness #Interview #onehealth #outbreakinvestigations #outbreakresponse #wholegenomesequencing
https://www.europesays.com/europe/125078/

Pipeline release! nf-core/sarek v3.10.0 - 3.10.0 - Aktse!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.10.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Caris Life Sciences Launches Caris Detect Blood Test for Early Cancer Detection https://www.byteseu.com/2171437/ #AIInHealthcare #ArtificialIntelligence #Biomarkers #CancerDetection #CarisLifeSciences #ClinicalLabTesting #EarlyCancerDetection #GenomicSequencing #LaboratoryInnovation #LiquidBiopsy #MolecularDiagnostics #MultiCancerDetection #Oncology #Science #TranscriptomeSequencing #WholeGenomeSequencing

Pipeline release! nf-core/sarek v3.9.0 - 3.9.0 - Sarvesjåhkå!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.9.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

https://www.europesays.com/ch/94178/ Roche Unveils AXELIOS 1 DNA Sequencing Platform for Same-Day Genomics #ClinicalDiagnostics #ClinicalLabEquipment #DNASequencing #genomics #LaboratoryTechnology #MolecularDiagnostics #NanoporeTechnology #NextGenerationSequencing #Roche #SequencingByExpansion #SequencingPlatforms #WholeGenomeSequencing

https://www.europesays.com/ch/93819/ Roche launches AXELIOS 1 sequencing platform #AXELIOS1 #genomics #ResearchLabs #RHHBY #Roche #SBXTechnology #SequencingPlatform #WholeGenomeSequencing

https://www.europesays.com/ie/529596/ Viral DNA blood test accurately gauges post-surgery cancer recovery success #Assay #biopsy #blood #BloodTest #cancer #DNA #Éire #Genome #genomics #HeadAndNeckCancer #Health #IE #Ireland #medicine #Neck #Research #Surgery #Tumor #virus #WholeGenomeSequencing

https://www.europesays.com/ch/81353/ Alps Group Inc Expands MyGenome Accreditation to Include Whole Genome Sequencing Under MS ISO 15189:2022 #Alps #ForwardLookingStatements #GenomicData #InstitutionalPartners #KualaLumpur #Malaysia #MyGenomeSdn #TheCompany #WholeGenomeSequencing

https://www.europesays.com/ch/80236/ Alps Group unit gains ISO lab nod for WGS | ALPS SEC Filing #Alps #AlpsGroupInc #BiotechnologyMalaysia #ClinicalGenomics #MSISO15189:2022 #MyGenome #SoutheastAsiaGenomics #WholeGenomeSequencing

https://www.europesays.com/ch/80118/ Alps Group gains MS ISO 15189:2022 WGS accreditation #accreditation #Alps #AlpsGroupInc #biotechnology #MSISO15189:2022 #SoutheastAsiaGenomics #WholeGenomeSequencing

https://www.europesays.com/ie/521150/ Novel technique enables rapid sequencing of rare hantaviruses #Éire #Genetic #Genome #Hantavirus #Health #IE #Ireland #Microbiology #PublicHealth #virus #WholeGenomeSequencing

EFSA Announces Third WGS Food Safety Conference

On September 2–3, 2026 in Rome, Italy, the European Food Safety Authority (EFSA) and the Inter-European Union Reference…
#Europe #EU #datasharing #EFSA #EuropeanUnion #wholegenomesequencing
https://www.europesays.com/europe/16000/

U.S. CDC Supports Moldova’s First Use of WGS in Foodborne Illness Outbreak Investigation

The country of Moldova, with support from the U.S. Centers for Disease Control and Prevention’s (CDC’s) Eastern Europe…
#Moldova #MD #Europe #Europa #EU #cdc #foodborneillness #outbreakinvestigations #salmonella #Wholegenomesequencing
https://www.europesays.com/2838007/

https://www.europesays.com/2838007/ U.S. CDC Supports Moldova’s First Use of WGS in Foodborne Illness Outbreak Investigation #cdc #FoodborneIllness #Moldova #OutbreakInvestigations #salmonella #WholeGenomeSequencing

Long-read whole genome sequencing uncovers new genetic variants linked to autism

Researchers at the University of California San Diego have identified new genetic variants associated with autism spectrum disorder…
#NewsBeep #News #Science #AU #Australia #autism #Cell #disability #dna #DNAMethylation #Gene #Genes #Genetic #Genome #Genomics #medicine #research #WholeGenomeSequencing
https://www.newsbeep.com/au/530007/

Long-read whole genome sequencing uncovers new genetic variants linked to autism

Researchers at the University of California San Diego have identified new genetic variants associated with autism spectrum disorder…
#NewsBeep #News #Science #autism #CA #Canada #Cell #disability #DNA #DNAmethylation #Gene #genes #Genetic #Genome #Genomics #medicine #research #WholeGenomeSequencing
https://www.newsbeep.com/ca/525697/

🧬 Is it possible to make whole-genome sequencing practical for everyday clinical care?

🔗 GenRiskPro: A Comprehensive Whole-Genome Sequencing Analysis Platform for Clinical and Wellness Applications. https://spj.science.org/doi/epdf/10.34133/csbj.0011

📚 CSBJ (Smart Hospital Section) - A Science Partner Journal: https://spj.science.org/page/csbj/for-authors#smarthospital

#Genomics #PrecisionMedicine #WholeGenomeSequencing #DigitalHealth #PersonalizedMedicine

https://www.europesays.com/ie/?p=358883 Preplanned Studies: Genomic Characterization of Clostridium botulinum Isolates from Soil and Soybean Samples in High-Incidence Regions — Xinjiang, Inner Mongolia, and Qinghai PLADs, China, 2024 #ClostridiumBotulinum #BotulinumNeurotoxin #Éire #Health #IE #Ireland #WholeGenomeSequencing

Pipeline release! nf-core/sarek v3.8.1 - 3.8.1 - Laitaure!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.8.1

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/sarek v3.8.0 - 3.8.0 - Sitojaure!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.8.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/sarek v3.7.1 - 3.7.1 - Buollámtjåhkka!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.7.1

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/sarek v3.7.0 - 3.7.0 - Saltoluokta!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.7.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

https://www.europesays.com/ie/179583/ Landmark Japanese genome cohort reveals best practices for managing massive DNA databases #Éire #Genome #Genomic #Health #Healthcare #IE #Ireland #Research #WholeGenomeSequencing

Pipeline release! nf-core/sarek v3.6.1 - Sarek 3.6.1 - Sjnjierák!

Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.6.1

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

World Record Set For Fastest Genome Sequencing | Health

Key Takeaways Researchers have …
#NewsBeep #News #Genetics #animalhusbandry #AU #Australia #biochemistry #bioinformatics #biologicalengineering #Biology #Biotechnology #childhealth #clinicalmedicine #consumernews #DNAsequencing #generalhealth #Genomics #Health #Healthcare #healthsciences #LifeSciences #medicaldiagnosis #medicalspecialties #medicine #molecularbiology #omics #Science #WholeGenomeSequencing
https://www.newsbeep.com/au/228094/

World Record Set For Fastest Genome Sequencing | Health

#NewsBeep #News #US #USA #UnitedStates #UnitedStatesOfAmerica #Genetics #animalhusbandry #Biochemistry #Bioinformatics #biologicalengineering #Biology #biotechnology #childhealth #clinicalmedicine #consumernews #dnasequencing #generalhealth #genomics #Health #Healthcare #healthsciences #LifeSciences #medicaldiagnosis #medicalspecialties #medicine #molecularbiology #omics #Science #Wholegenomesequencing
https://www.newsbeep.com/us/238921/

Cancer-Related Genetic Variants May Be Inherited by Five Percent of People

Credit: frimages/Getty Images One in every 20 people may inherit a genetic variant in key genes that make…
#NewsBeep #News #Genetics #cancerscreening #cancers #genetictesting(diagnostictechnique) #geneticvariants #news&features #Precisionmedicine #Science #topics #UK #UnitedKingdom #WholeGenomeSequencing
https://www.newsbeep.com/uk/208024/

https://www.europesays.com/uk/507073/ World Record Set For Fastest Genome Sequencing | Health #AnimalHusbandry #biochemistry #Bioinformatics #BiologicalEngineering #Biology #biotechnology #BranchesOfGenetics #ChildHealth #ClinicalMedicine #ConsumerNews #DNASequencing #GeneralHealth #Genetics #Genomics #Health #HealthCare #HealthSciences #HumanGenome #LifeSciences #MedicalDiagnosis #MedicalSpecialties #Medicine #MolecularBiology #omics #Science #UK #UnitedKingdom #WholeGenomeSequencing

Pipeline release! nf-core/sarek v3.6.0 - Sarek 3.6.0 - Kvikkjokk!

Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.6.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

PacBio Selected for Korean Pangenome: 1,000+ Genomes https://www.byteseu.com/1448298/ #000Genomes #1 #CiFi #genomics #HiFiSequencing #HPRC #KDCA #KinnexRNA #KNIH #KoreanPangenomeProject #NationalInitiative #PACB #PacBio #PrecisionMedicine #SouthKorea #TelomereToTelomere #WholeGenomeSequencing

https://www.europesays.com/uk/484811/ Sheffield Teaching Hospitals to run genetic testing study for babies #Britain #DNA #England #GenerationStudy #GenomicPopulationHealthService #GenomicsEngland #GreatBritain #JessopWing #NewbornBabies #NHSEngland #sheffield #SheffieldTeachingHospitalsNHSFoundationTrust #UK #UnitedKingdom #WholeGenomeSequencing

Sheffield Teaching Hospitals to run genetic testing study for babies

More than 600 expectant parents have signed up to a study at Sheffield Teaching Hospitals NHS Foundation Trust,…
#NewsBeep #News #Genetics #CA #Canada #DNA #Generationstudy #genomicpopulationhealthservice #GenomicsEngland #JessopWing #newbornbabies #NHSEngland #Science #SheffieldTeachingHospitalsNHSFoundationTrust #WholeGenomeSequencing
https://www.newsbeep.com/ca/197846/

Sheffield Teaching Hospitals to run genetic testing study for babies

More than 600 expectant parents have signed up to a study at Sheffield Teaching Hospitals NHS Foundation Trust,…
#NewsBeep #News #US #USA #UnitedStates #UnitedStatesOfAmerica #Genetics #DNA #Generationstudy #genomicpopulationhealthservice #genomicsengland #JessopWing #newbornbabies #NHSEngland #Science #SheffieldTeachingHospitalsNHSFoundationTrust #Wholegenomesequencing
https://www.newsbeep.com/us/209078/

https://www.europesays.com/uk/439277/ Whole-Genome Sequencing Will Change Pregnancy #Genetics #Health #Science #UK #UnitedKingdom #WholeGenomeSequencing #WiredHealth

Malaria-Transmitting Mosquito’s Genetic Diversity and Evolution Revealed

There are a variety of methods that have been established to curtail the spread of infectious disease, from…
#NewsBeep #News #Genetics #CA #Canada #Geneticdiversity #infectiousdiseases #malaria #mosquitoes #Mutation #Science #topics #WholeGenomeSequencing
https://www.newsbeep.com/ca/155007/

Whole-Genome Sequencing Will Change Pregnancy

The world of pregnancy is going to radically change, predicts Noor Siddiqui. “I think that the default way…
#NewsBeep #News #Genetics #AU #Australia #Health #Science #WholeGenomeSequencing #wiredhealth
https://www.newsbeep.com/au/147889/

https://www.europesays.com/uk/369352/ Genomic epidemiology of Mycobacterium tuberculosis in Wales #Britain #DNASequencing #Epidemiology #GenomicCluster #GreatBritain #HumanitiesAndSocialSciences #multidisciplinary #Science #Tuberculosis #UK #UnitedKingdom #Wales #WholeGenomeSequencing

Direct-to-Consumer (DTC) Genetic Testing Market to Double

Dublin, Aug. 21, 2025 (GLOBE NEWSWIRE) — The “Direct-to-Consumer (DTC) Genetic Testing Market – Test Types, Technologies and…
#NewsBeep #News #US #USA #UnitedStates #UnitedStatesOfAmerica #Genetics #DTCGeneticTesting #genetictesting #GeneticsTesting #ResearchandMarkets #Science #Wholeexomesequencing #Wholegenomesequencing
https://www.newsbeep.com/us/99082/

Pipeline release! nf-core/sarek v3.5.1 - 3.5.1 - Akkatjåkkå!

Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.5.1

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Unlocking the Secrets of Your DNA: A Deep Dive into Polygenic Risk Scores from Whole Genome Sequencing

As consumer genetics becomes increasingly popular, understanding the complexities of polygenic risk scores (PRS) derived from whole genome sequencing (WGS) is crucial. This article explores alternativ...

https://news.lavx.hu/article/unlocking-the-secrets-of-your-dna-a-deep-dive-into-polygenic-risk-scores-from-whole-genome-sequencing

#news #tech #PolygenicRiskScores #WholeGenomeSequencing #GeneticImputation

Pipeline release! nf-core/sarek v3.5.0 - 3.5.0 - Áhkájiegna!

Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.5.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

R to @ECDC_EU: The more frequent use of #WholeGenomeSequencing may have enhanced the sensitivity of surveillance, thereby increasing the ability to detect outbreaks in the Member States.

Read more in the report:
https://www.ecdc.europa.eu/en/publications-data/european-union-one-health-2022-zoonoses-report

And our press release:
https://www.ecdc.europa.eu/en/news-events/campylobacteriosis-and-salmonellosis-still-below-pre-pandemic-levels-west-nile-virus

🐦🔗: https://nitter.cz/ECDC_EU/status/1735689170901762257#m

[2023-12-15 15:52 UTC]

The Mexico City Prospective Study is a prospective cohort of more than 150,000 adults recruited two decades ago from the urban districts of Coyoacán and Iztapalapa in Mexico City. Here we generated genotype and exome-sequencing data for all individuals and whole-genome sequencing data for 9,950 selected individuals. #isogg #dna #mexico #geneadons #nature #genetics #exome #indigenous #wholegenomesequencing

https://www.nature.com/articles/s41586-023-06595-3

Will this study lead to population-wide newborn sequencing?

Today's show: Columbia Professor @WendyKChung on the GUARDIAN Newborn Sequencing Study

https://mendelspod.com/podcasts/update-guardian-newborn-sequencing-study/

#newbornscreening #wholegenomesequencing #genomicmedicine

RT @Eurosurveillanc: This week's issue is out with an #Editorial from the team

📰https://bit.ly/EUS282

🧬#genomics #WholeGenomeSequencing #SARSCoV2 #Omicron #chinacovid #COVID19
🦟#dengue #chikungunya #zikavirus #mosquitoes #tourism #Travel
🍽️#salmonella #pork #FoodSafety #publichealth #outbreaks

🐦🔗: https://n.respublicae.eu/ECDC_EU/status/1613843608624574464

Great meeting at the New York Genome Center tonight @nygenome@twitter.
Marcin Imielinski, Dan Landau, Nico Robine presenting the future of #WholeGenomeSequencing cancer.

#WGS #cancer
Do you use #WGS?

Do you use a lot of #genomic data in your research or are you considering getting a direct-to-consumer #WholeGenomeSequencing kit for the holidays? Here's a really great review from #NatureReviewsGenetics that covers the technological and legal protections for genomic data: https://www.nature.com/articles/s41576-022-00455-y #science #medicine #genetics #privacy #genome #WGS

I very much like how this study has used #WholeGenomeSequencing to track within-host spread and evolution of Pseudomonas during an ICU stay. Good evidence for gut-> lung spread and two independent mutations generating meropenem resistant lineages. Nice work. https://www.nature.com/articles/s41467-022-34101-2

Still learning about Mastodon and trying hashtags!

For a #Genealogy Project, I have been tracing surname lines with #GeneticGenealogy using #Y_Chromosome #SnpTests from Family Tree DNA ( #FTDNA ). That has worked out very well.

Now am trying to look at autosomal SNPs from #WholeGenomeSequencing ( #WGS ) tests to detect possible common ancestors back 9-12 generations or so. Want to see if very rare genetic variants ( #vrGV ) can be used in some way to identify those possible connections.