#wholegenomesequencing — Public Fediverse posts

EFSA Announces Third WGS Food Safety Conference

On September 2–3, 2026 in Rome, Italy, the European Food Safety Authority (EFSA) and the Inter-European Union Reference…
#Europe #EU #datasharing #EFSA #EuropeanUnion #wholegenomesequencing
https://www.europesays.com/europe/16000/

Identification and characterization of Phi1 and Phi3 bacteriophages targeting Xylella fastidiosa subsp. pauca, the causal agent of olive quick decline in Italy https://www.diningandcooking.com/2601918/identification-and-characterization-of-phi1-and-phi3-bacteriophages-targeting-xylella-fastidiosa-subsp-pauca-the-causal-agent-of-olive-quick-decline-in-italy/ #ComputationalBiologyAndBioinformatics #HumanitiesAndSocialSciences #Italia #Italian #ItalianOlive #ItalianOliveOil #italiano #italy #microbiology #multidisciplinary #NXylellaPhages #OffTargetEffects #Olive #OliveOil #PhageDerivedEnzymes #science #TransmissionElectronMicroscopy #WholeGenomeSequencing

Long-read whole genome sequencing uncovers new genetic variants linked to autism

Researchers at the University of California San Diego have identified new genetic variants associated with autism spectrum disorder…
#NewsBeep #News #Science #AU #Australia #autism #Cell #disability #dna #DNAMethylation #Gene #Genes #Genetic #Genome #Genomics #medicine #research #WholeGenomeSequencing
https://www.newsbeep.com/au/530007/

🧬 Is it possible to make whole-genome sequencing practical for everyday clinical care?

🔗 GenRiskPro: A Comprehensive Whole-Genome Sequencing Analysis Platform for Clinical and Wellness Applications. https://spj.science.org/doi/epdf/10.34133/csbj.0011

📚 CSBJ (Smart Hospital Section) - A Science Partner Journal: https://spj.science.org/page/csbj/for-authors#smarthospital

#Genomics #PrecisionMedicine #WholeGenomeSequencing #DigitalHealth #PersonalizedMedicine

Pipeline release! nf-core/sarek v3.8.1 - 3.8.1 - Laitaure!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.8.1

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/sarek v3.8.0 - 3.8.0 - Sitojaure!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.8.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/sarek v3.7.1 - 3.7.1 - Buollámtjåhkka!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.7.1

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/sarek v3.7.0 - 3.7.0 - Saltoluokta!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.7.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/sarek v3.6.1 - Sarek 3.6.1 - Sjnjierák!

Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.6.1

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/sarek v3.6.0 - Sarek 3.6.0 - Kvikkjokk!

Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.6.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

https://www.europesays.com/uk/232646/ Scientists reveal how chemotherapy causes genetic damage in healthy blood #Blood #Cancer #CancerTreatment #Cell #chemotherapy #Children #DNA #DNADamage #Drugs #Genetic #Genetics #Genome #Genomic #Genomics #Hospital #Research #Science #StemCells #UK #UnitedKingdom #WholeGenomeSequencing

https://www.europesays.com/uk/124610/ Roche Partners With Broad Labs to Transform Newborn Genetic Testing #BroadClinicalLabs #GeneticTesting #Genetics #GenomicTechnology #NeonatalIntensiveCare #NewbornDiagnostics #NextGenerationSequencing #NICUTesting #PrecisionMedicine #RHHBY #RocheDiagnostics #SBXSequencing #Science #UK #UnitedKingdom #WholeGenomeSequencing

Pipeline release! nf-core/sarek v3.5.1 - 3.5.1 - Akkatjåkkå!

Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.5.1

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Unlocking the Secrets of Your DNA: A Deep Dive into Polygenic Risk Scores from Whole Genome Sequencing

As consumer genetics becomes increasingly popular, understanding the complexities of polygenic risk scores (PRS) derived from whole genome sequencing (WGS) is crucial. This article explores alternativ...

https://news.lavx.hu/article/unlocking-the-secrets-of-your-dna-a-deep-dive-into-polygenic-risk-scores-from-whole-genome-sequencing

#news #tech #PolygenicRiskScores #WholeGenomeSequencing #GeneticImputation

Pipeline release! nf-core/sarek v3.5.0 - 3.5.0 - Áhkájiegna!

Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.5.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

The Mexico City Prospective Study is a prospective cohort of more than 150,000 adults recruited two decades ago from the urban districts of Coyoacán and Iztapalapa in Mexico City. Here we generated genotype and exome-sequencing data for all individuals and whole-genome sequencing data for 9,950 selected individuals. #isogg #dna #mexico #geneadons #nature #genetics #exome #indigenous #wholegenomesequencing

https://www.nature.com/articles/s41586-023-06595-3

The Mexico City Prospective Study is a prospective cohort of more than 150,000 adults recruited two decades ago from the urban districts of Coyoacán and Iztapalapa in Mexico City. Here we generated genotype and exome-sequencing data for all individuals and whole-genome sequencing data for 9,950 selected individuals. #isogg #dna #mexico #geneadons #nature #genetics #exome #indigenous #wholegenomesequencing

https://www.nature.com/articles/s41586-023-06595-3

The Mexico City Prospective Study is a prospective cohort of more than 150,000 adults recruited two decades ago from the urban districts of Coyoacán and Iztapalapa in Mexico City. Here we generated genotype and exome-sequencing data for all individuals and whole-genome sequencing data for 9,950 selected individuals. #isogg #dna #mexico #geneadons #nature #genetics #exome #indigenous #wholegenomesequencing

https://www.nature.com/articles/s41586-023-06595-3

RT @Eurosurveillanc: This week's issue is out with an #Editorial from the team

📰https://bit.ly/EUS282

🧬#genomics #WholeGenomeSequencing #SARSCoV2 #Omicron #chinacovid #COVID19
🦟#dengue #chikungunya #zikavirus #mosquitoes #tourism #Travel
🍽️#salmonella #pork #FoodSafety #publichealth #outbreaks

🐦🔗: https://n.respublicae.eu/ECDC_EU/status/1613843608624574464

Still learning about Mastodon and trying hashtags!

For a #Genealogy Project, I have been tracing surname lines with #GeneticGenealogy using #Y_Chromosome #SnpTests from Family Tree DNA ( #FTDNA ). That has worked out very well.

Now am trying to look at autosomal SNPs from #WholeGenomeSequencing ( #WGS ) tests to detect possible common ancestors back 9-12 generations or so. Want to see if very rare genetic variants ( #vrGV ) can be used in some way to identify those possible connections.