#annotation — Public Fediverse posts

Pipeline release! nf-core/sarek v3.10.0 - 3.10.0 - Aktse!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.10.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/sarek v3.10.0 - 3.10.0 - Aktse!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.10.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/sarek v3.10.0 - 3.10.0 - Aktse!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.10.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/sarek v3.10.0 - 3.10.0 - Aktse!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.10.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/sarek v3.10.0 - 3.10.0 - Aktse!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.10.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

From text recognition to text analysis: At the digital FGHO Summerschool (24–28 Aug) you'll transcribe sources with #Transkribus & analyze them with #CATMA.

Working on a project with historical sources? Sign up by Aug 16 for this workshop (held in German)! 👇
https://fgho.eu/de/summerschool/2026-quellen-digital-erschliessen

#DigitalHumanities #DigitalHistory #DH #HTR #Annotation

From text recognition to text analysis: At the digital FGHO Summerschool (24–28 Aug) you'll transcribe sources with #Transkribus & analyze them with #CATMA.

Working on a project with historical sources? Sign up by Aug 16 for this workshop (held in German)! 👇
https://fgho.eu/de/summerschool/2026-quellen-digital-erschliessen

#DigitalHumanities #DigitalHistory #DH #HTR #Annotation

From text recognition to text analysis: At the digital FGHO Summerschool (24–28 Aug) you'll transcribe sources with #Transkribus & analyze them with #CATMA.

Working on a project with historical sources? Sign up by Aug 16 for this workshop (held in German)! 👇
https://fgho.eu/de/summerschool/2026-quellen-digital-erschliessen

#DigitalHumanities #DigitalHistory #DH #HTR #Annotation

From text recognition to text analysis: At the digital FGHO Summerschool (24–28 Aug) you'll transcribe sources with #Transkribus & analyze them with #CATMA.

Working on a project with historical sources? Sign up by Aug 16 for this workshop (held in German)! 👇
https://fgho.eu/de/summerschool/2026-quellen-digital-erschliessen

#DigitalHumanities #DigitalHistory #DH #HTR #Annotation

From text recognition to text analysis: At the digital FGHO Summerschool (24–28 Aug) you'll transcribe sources with #Transkribus & analyze them with #CATMA.

Working on a project with historical sources? Sign up by Aug 16 for this workshop (held in German)! 👇
https://fgho.eu/de/summerschool/2026-quellen-digital-erschliessen

#DigitalHumanities #DigitalHistory #DH #HTR #Annotation

Pipeline release! nf-core/mag v5.5.0 - mag 5.5.0 - Purple Penguin!
Assembly and binning of metagenomes
Please see the changelog: https://github.com/nf-core/mag/releases/tag/5.5.0

#annotation #assembly #binning #longreadsequencing #metagenomes #metagenomics #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/mag v5.5.0 - mag 5.5.0 - Purple Penguin!
Assembly and binning of metagenomes
Please see the changelog: https://github.com/nf-core/mag/releases/tag/5.5.0

#annotation #assembly #binning #longreadsequencing #metagenomes #metagenomics #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/mag v5.5.0 - mag 5.5.0 - Purple Penguin!
Assembly and binning of metagenomes
Please see the changelog: https://github.com/nf-core/mag/releases/tag/5.5.0

#annotation #assembly #binning #longreadsequencing #metagenomes #metagenomics #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/mag v5.5.0 - mag 5.5.0 - Purple Penguin!
Assembly and binning of metagenomes
Please see the changelog: https://github.com/nf-core/mag/releases/tag/5.5.0

#annotation #assembly #binning #longreadsequencing #metagenomes #metagenomics #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/mag v5.5.0 - mag 5.5.0 - Purple Penguin!
Assembly and binning of metagenomes
Please see the changelog: https://github.com/nf-core/mag/releases/tag/5.5.0

#annotation #assembly #binning #longreadsequencing #metagenomes #metagenomics #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

【研修備忘録】Spring Boot 開発＆テストでよく使ったアノテーション・メソッドまとめ
https://qiita.com/otokoumeKM/items/ebe23656e7ac5876365d?utm_campaign=popular_items&utm_medium=feed&utm_source=popular_items

#qiita #Java #テスト #annotation #SpringBoot #新卒エンジニア

【研修備忘録】Spring Boot 開発＆テストでよく使ったアノテーション・メソッドまとめ
https://qiita.com/otokoumeKM/items/ebe23656e7ac5876365d?utm_campaign=popular_items&utm_medium=feed&utm_source=popular_items

#qiita #Java #テスト #annotation #SpringBoot #新卒エンジニア

Es gibt ja nun schon einige sehr gute Screenshot Tools unter Linux aber eines, das mir persönlich ausgesprochen gut gefällt und mittlerweile auch unter Linux vorhanden ist - EShot.

https://github.com/Benoks/EShot

#windows #linux #wayland #screenshot #gif #ocr #mp4 #programmempfehlung #cli #annotation #kde #gnome

Es gibt ja nun schon einige sehr gute Screenshot Tools unter Linux aber eines, das mir persönlich ausgesprochen gut gefällt und mittlerweile auch unter Linux vorhanden ist - EShot.

https://github.com/Benoks/EShot

#windows #linux #wayland #screenshot #gif #ocr #mp4 #programmempfehlung #cli #annotation #kde #gnome

Es gibt ja nun schon einige sehr gute Screenshot Tools unter Linux aber eines, das mir persönlich ausgesprochen gut gefällt und mittlerweile auch unter Linux vorhanden ist - EShot.

https://github.com/Benoks/EShot

#windows #linux #wayland #screenshot #gif #ocr #mp4 #programmempfehlung #cli #annotation #kde #gnome

Es gibt ja nun schon einige sehr gute Screenshot Tools unter Linux aber eines, das mir persönlich ausgesprochen gut gefällt und mittlerweile auch unter Linux vorhanden ist - EShot.

https://github.com/Benoks/EShot

#windows #linux #wayland #screenshot #gif #ocr #mp4 #programmempfehlung #cli #annotation #kde #gnome

Wenn du in Java schon ein paar Klassen geschrieben hast, bist du Annotationen ziemlich sicher begegnet: @Override, @SuppressWarnings, vielleicht auch @Deprecated. Am Anfang wirken die Dinger wie „Meta-Kram“, den man halt drüber schreibt. In Wahrheit sind Annotationen ein sehr pragmatisches Werk

https://magicmarcy.de/java-annotationen-selber-bauen

#Annotation #Java #Reflection #Dispatcher #CommandDispatcher #Metadaten #Mapping #Programming

Wenn du in Java schon ein paar Klassen geschrieben hast, bist du Annotationen ziemlich sicher begegnet: @Override, @SuppressWarnings, vielleicht auch @Deprecated. Am Anfang wirken die Dinger wie „Meta-Kram“, den man halt drüber schreibt. In Wahrheit sind Annotationen ein sehr pragmatisches Werk

https://magicmarcy.de/java-annotationen-selber-bauen

#Annotation #Java #Reflection #Dispatcher #CommandDispatcher #Metadaten #Mapping #Programming

Wenn du in Java schon ein paar Klassen geschrieben hast, bist du Annotationen ziemlich sicher begegnet: @Override, @SuppressWarnings, vielleicht auch @Deprecated. Am Anfang wirken die Dinger wie „Meta-Kram“, den man halt drüber schreibt. In Wahrheit sind Annotationen ein sehr pragmatisches Werk

https://magicmarcy.de/java-annotationen-selber-bauen

#Annotation #Java #Reflection #Dispatcher #CommandDispatcher #Metadaten #Mapping #Programming

Pipeline release! nf-core/sarek v3.9.0 - 3.9.0 - Sarvesjåhkå!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.9.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/sarek v3.9.0 - 3.9.0 - Sarvesjåhkå!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.9.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/sarek v3.9.0 - 3.9.0 - Sarvesjåhkå!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.9.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/sarek v3.9.0 - 3.9.0 - Sarvesjåhkå!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.9.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/sarek v3.9.0 - 3.9.0 - Sarvesjåhkå!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.9.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

⏲️ And it's another final countdown!

🚀 Ihr könnt euch noch für den zweitägigen Workshop "Scores, Text und Audio" anmelden! Der Online-Kurs findet von Mo, 06.07. bis Di, 07.07. (jeweils von 10–13 Uhr) statt und vermittelt einen Überblick zu musikwissenschaftlichen Annotationstools, verbunden mit praktischen Hands-On Sessions.

👉 Schaut mal auf unserem Portal vorbei, dort findet ihr das Programm... 🔗 https://nfdi4culture.de/id/E6794

📝 ..und den Anmeldelink: https://events.nfdi4culture.de/event/55/

#NFDIrocks #annotation

⏲️ And it's another final countdown!

🚀 Ihr könnt euch noch für den zweitägigen Workshop "Scores, Text und Audio" anmelden! Der Online-Kurs findet von Mo, 06.07. bis Di, 07.07. (jeweils von 10–13 Uhr) statt und vermittelt einen Überblick zu musikwissenschaftlichen Annotationstools, verbunden mit praktischen Hands-On Sessions.

👉 Schaut mal auf unserem Portal vorbei, dort findet ihr das Programm... 🔗 https://nfdi4culture.de/id/E6794

📝 ..und den Anmeldelink: https://events.nfdi4culture.de/event/55/

#NFDIrocks #annotation

⏲️ And it's another final countdown!

🚀 Ihr könnt euch noch für den zweitägigen Workshop "Scores, Text und Audio" anmelden! Der Online-Kurs findet von Mo, 06.07. bis Di, 07.07. (jeweils von 10–13 Uhr) statt und vermittelt einen Überblick zu musikwissenschaftlichen Annotationstools, verbunden mit praktischen Hands-On Sessions.

👉 Schaut mal auf unserem Portal vorbei, dort findet ihr das Programm... 🔗 https://nfdi4culture.de/id/E6794

📝 ..und den Anmeldelink: https://events.nfdi4culture.de/event/55/

#NFDIrocks #annotation

⏲️ And it's another final countdown!

🚀 Ihr könnt euch noch für den zweitägigen Workshop "Scores, Text und Audio" anmelden! Der Online-Kurs findet von Mo, 06.07. bis Di, 07.07. (jeweils von 10–13 Uhr) statt und vermittelt einen Überblick zu musikwissenschaftlichen Annotationstools, verbunden mit praktischen Hands-On Sessions.

👉 Schaut mal auf unserem Portal vorbei, dort findet ihr das Programm... 🔗 https://nfdi4culture.de/id/E6794

📝 ..und den Anmeldelink: https://events.nfdi4culture.de/event/55/

#NFDIrocks #annotation

⏲️ And it's another final countdown!

🚀 Ihr könnt euch noch für den zweitägigen Workshop "Scores, Text und Audio" anmelden! Der Online-Kurs findet von Mo, 06.07. bis Di, 07.07. (jeweils von 10–13 Uhr) statt und vermittelt einen Überblick zu musikwissenschaftlichen Annotationstools, verbunden mit praktischen Hands-On Sessions.

👉 Schaut mal auf unserem Portal vorbei, dort findet ihr das Programm... 🔗 https://nfdi4culture.de/id/E6794

📝 ..und den Anmeldelink: https://events.nfdi4culture.de/event/55/

#NFDIrocks #annotation

We’re excited to share that we published the “Characters in Action” (ChiA) annotation guidelines on Zenodo today. ChiA captures three key dimensions of character representation in narrative texts: mention in text, participation in event, and direct speech.

👉 https://doi.org/10.5281/zenodo.20642074
(1/3) #DH #CLS #Narratology #Annotation #Guidelines

We’re excited to share that we published the “Characters in Action” (ChiA) annotation guidelines on Zenodo today. ChiA captures three key dimensions of character representation in narrative texts: mention in text, participation in event, and direct speech.

👉 https://doi.org/10.5281/zenodo.20642074
(1/3) #DH #CLS #Narratology #Annotation #Guidelines

We’re excited to share that we published the “Characters in Action” (ChiA) annotation guidelines on Zenodo today. ChiA captures three key dimensions of character representation in narrative texts: mention in text, participation in event, and direct speech.

👉 https://doi.org/10.5281/zenodo.20642074
(1/3) #DH #CLS #Narratology #Annotation #Guidelines

We’re excited to share that we published the “Characters in Action” (ChiA) annotation guidelines on Zenodo today. ChiA captures three key dimensions of character representation in narrative texts: mention in text, participation in event, and direct speech.

👉 https://doi.org/10.5281/zenodo.20642074
(1/3) #DH #CLS #Narratology #Annotation #Guidelines

We’re excited to share that we published the “Characters in Action” (ChiA) annotation guidelines on Zenodo today. ChiA captures three key dimensions of character representation in narrative texts: mention in text, participation in event, and direct speech.

👉 https://doi.org/10.5281/zenodo.20642074
(1/3) #DH #CLS #Narratology #Annotation #Guidelines

The Internationalization Working Group has published HTML Ruby Markup Extensions as a W3C Candidate Recommendation Snapshot.

Ruby, a form of interlinear annotation, are short runs of text alongside the base text. They are typically used in East Asian documents to indicate pronunciation or to provide a short annotation. This specification revises and extends the markup model established by HTML to express ruby.
https://www.w3.org/news/2026/w3c-invites-implementations-of-html-ruby-markup-extensions/
extensions/
#i18n #Annotation #WebStandards

The Internationalization Working Group has published HTML Ruby Markup Extensions as a W3C Candidate Recommendation Snapshot.

Ruby, a form of interlinear annotation, are short runs of text alongside the base text. They are typically used in East Asian documents to indicate pronunciation or to provide a short annotation. This specification revises and extends the markup model established by HTML to express ruby.
https://www.w3.org/news/2026/w3c-invites-implementations-of-html-ruby-markup-extensions/
extensions/
#i18n #Annotation #WebStandards

The Internationalization Working Group has published HTML Ruby Markup Extensions as a W3C Candidate Recommendation Snapshot.

Ruby, a form of interlinear annotation, are short runs of text alongside the base text. They are typically used in East Asian documents to indicate pronunciation or to provide a short annotation. This specification revises and extends the markup model established by HTML to express ruby.
https://www.w3.org/news/2026/w3c-invites-implementations-of-html-ruby-markup-extensions/
extensions/
#i18n #Annotation #WebStandards

The Internationalization Working Group has published HTML Ruby Markup Extensions as a W3C Candidate Recommendation Snapshot.

Ruby, a form of interlinear annotation, are short runs of text alongside the base text. They are typically used in East Asian documents to indicate pronunciation or to provide a short annotation. This specification revises and extends the markup model established by HTML to express ruby.
https://www.w3.org/news/2026/w3c-invites-implementations-of-html-ruby-markup-extensions/
extensions/
#i18n #Annotation #WebStandards

The Internationalization Working Group has published HTML Ruby Markup Extensions as a W3C Candidate Recommendation Snapshot.

Ruby, a form of interlinear annotation, are short runs of text alongside the base text. They are typically used in East Asian documents to indicate pronunciation or to provide a short annotation. This specification revises and extends the markup model established by HTML to express ruby.
https://www.w3.org/news/2026/w3c-invites-implementations-of-html-ruby-markup-extensions/
extensions/
#i18n #Annotation #WebStandards

today i learned about people who use sticky tabs to annotate books:

https://booksteacupreviews.com/2025/07/18/my-simple-annotation-system-how-i-annotate-books/#why-i-annotate

are any of y'all into this as a hobby?

(i've only done this for research - marking pages that have quotes i plan to use in something else)

#annotation #books #bookstodon

today i learned about people who use sticky tabs to annotate books:

https://booksteacupreviews.com/2025/07/18/my-simple-annotation-system-how-i-annotate-books/#why-i-annotate

are any of y'all into this as a hobby?

(i've only done this for research - marking pages that have quotes i plan to use in something else)

#annotation #books #bookstodon

today i learned about people who use sticky tabs to annotate books:

https://booksteacupreviews.com/2025/07/18/my-simple-annotation-system-how-i-annotate-books/#why-i-annotate

are any of y'all into this as a hobby?

(i've only done this for research - marking pages that have quotes i plan to use in something else)

#annotation #books #bookstodon

today i learned about people who use sticky tabs to annotate books:

https://booksteacupreviews.com/2025/07/18/my-simple-annotation-system-how-i-annotate-books/#why-i-annotate

are any of y'all into this as a hobby?

(i've only done this for research - marking pages that have quotes i plan to use in something else)

#annotation #books #bookstodon

today i learned about people who use sticky tabs to annotate books:

https://booksteacupreviews.com/2025/07/18/my-simple-annotation-system-how-i-annotate-books/#why-i-annotate

are any of y'all into this as a hobby?

(i've only done this for research - marking pages that have quotes i plan to use in something else)

#annotation #books #bookstodon

"Stop Reading Passively — How Annotation Transforms the Way You Learn." — When you annotate, you stop receiving information and start responding to it. That's where real learning begins. ✍️ paulopinto.xyz/notes/2026/0... #ActiveLearning #Annotation #LearningTools

How-to use Hypothesis for researchers paulopinto.xyz/notes/2026/0... #annotation #hypothesis #research

How-to use Hypothesis for rese...

Public annotation induces the collective production of knowledge and ways of disseminating and searching for information and allows for effective communication to become an ongoing process. paulopinto.xyz/notes/2026/0... #annotation #marginalia #knowledge

Pipeline release! nf-core/proteinannotator v1.1.0 - Crimson Quokka!
Generation of sequence-level annotations for amino acid sequences
Please see the changelog: https://github.com/nf-core/proteinannotator/releases/tag/1.1.0

#annotation #proteomics #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/proteinannotator v1.1.0 - Crimson Quokka!
Generation of sequence-level annotations for amino acid sequences
Please see the changelog: https://github.com/nf-core/proteinannotator/releases/tag/1.1.0

#annotation #proteomics #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/proteinannotator v1.1.0 - Crimson Quokka!
Generation of sequence-level annotations for amino acid sequences
Please see the changelog: https://github.com/nf-core/proteinannotator/releases/tag/1.1.0

#annotation #proteomics #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/proteinannotator v1.1.0 - Crimson Quokka!
Generation of sequence-level annotations for amino acid sequences
Please see the changelog: https://github.com/nf-core/proteinannotator/releases/tag/1.1.0

#annotation #proteomics #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/proteinannotator v1.1.0 - Crimson Quokka!
Generation of sequence-level annotations for amino acid sequences
Please see the changelog: https://github.com/nf-core/proteinannotator/releases/tag/1.1.0

#annotation #proteomics #nfcore #openscience #nextflow #bioinformatics

Bookmarked: Manu ・ Manuscript Annotation & Visualisation https://manu.is/ #Annotation #Handschriften #Tools A collaborative platform for annotating, transcribing, and visualising historical manuscripts. Built on IIIF and W3C Web Annotations.

Bookmarked: Manu ・ Manuscript Annotation & Visualisation https://manu.is/ #Annotation #Handschriften #Tools A collaborative platform for annotating, transcribing, and visualising historical manuscripts. Built on IIIF and W3C Web Annotations.

Bookmarked: Manu ・ Manuscript Annotation & Visualisation https://manu.is/ #Annotation #Handschriften #Tools A collaborative platform for annotating, transcribing, and visualising historical manuscripts. Built on IIIF and W3C Web Annotations.