#gatk4 — Public Fediverse posts
Live and recent posts from across the Fediverse tagged #gatk4, aggregated by home.social.
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Pipeline release! nf-core/sarek v3.8.1 - 3.8.1 - Laitaure!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.8.1#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/rnavar v1.2.3 - nf-core/rnavar 1.2.3 - Yellow Hammer Head!
gatk4 RNA variant calling pipeline
Please see the changelog: https://github.com/nf-core/rnavar/releases/tag/1.2.3#gatk4 #rna #rnaseq #variantcalling #worflow #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/sarek v3.8.0 - 3.8.0 - Sitojaure!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.8.0#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/sarek v3.7.1 - 3.7.1 - Buollámtjåhkka!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.7.1#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/rnavar v1.2.2 - nf-core/rnavar 1.2.2 - Gray Red Tail!
gatk4 RNA variant calling pipeline
Please see the changelog: https://github.com/nf-core/rnavar/releases/tag/1.2.2#gatk4 #rna #rnaseq #variantcalling #worflow #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/sarek v3.7.0 - 3.7.0 - Saltoluokta!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.7.0#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/sarek v3.6.1 - Sarek 3.6.1 - Sjnjierák!
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.6.1
#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/sarek v3.6.0 - Sarek 3.6.0 - Kvikkjokk!
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.6.0
#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/rnavar v1.2.1 - nf-core/rnavar 1.2.1 - Red Swordfish II!
Please see the changelog: https://github.com/nf-core/rnavar/releases/tag/1.2.1
#gatk4 #rna #rnaseq #variantcalling #worflow #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/rnavar v1.2.0 - nf-core/rnavar 1.2.0 - Black Bebop!
Please see the changelog: https://github.com/nf-core/rnavar/releases/tag/1.2.0
#gatk4 #rna #rnaseq #variantcalling #worflow #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/rnavar v1.1.1 - nf-core/rnavar 1.1.1 - Brave Benatar!
Please see the changelog: https://github.com/nf-core/rnavar/releases/tag/1.1.1
#gatk4 #rna #rnaseq #variantcalling #worflow #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/rnavar v1.1.0 - nf-core/rnavar 1.1.0 - Mighty Milano!
Please see the changelog: https://github.com/nf-core/rnavar/releases/tag/1.1.0
#gatk4 #rna #rnaseq #variantcalling #worflow #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/sarek v3.5.1 - 3.5.1 - Akkatjåkkå!
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.5.1
#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/sarek v3.5.0 - 3.5.0 - Áhkájiegna!
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.5.0
#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/sarek v3.4.4 - Sarek 3.4.4 - Ruopsokjåkhå!
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.4.4
#annotation #cancer #gatk4 #genomics #germline #pre-processing #somatic #target-panels #variant-calling #whole-exome-sequencing #whole-genome-sequencing #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/sarek v3.4.3 - Sarek 3.4.3 - Loametjåhkkå!
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.4.3
#annotation #cancer #gatk4 #genomics #germline #pre-processing #somatic #target-panels #variant-calling #whole-exome-sequencing #whole-genome-sequencing #nfcore #openscience #nextflow #bioinformatics