#preprocessing — Public Fediverse posts

Pipeline release! nf-core/sarek v3.8.1 - 3.8.1 - Laitaure!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.8.1

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/sarek v3.8.0 - 3.8.0 - Sitojaure!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.8.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Компрессор для данных или как я написал свой первый custom transformer

Эта статья будет полезна DS специалистам, и тем, кто хоть когда-нибудь сталкивался с такой проблемой, как выбросы в данных или OOD (out of distribution), и ищет пути решения проблем, возникающих из-за них.

https://habr.com/ru/articles/988736/

#выбросы #анализ_данных #data_science #preprocessing #compression #outliner #custom_transformer #transformer #sklearn

Компрессор для данных или как я написал свой первый custom transformer

Эта статья будет полезна DS специалистам, и тем, кто хоть когда-нибудь сталкивался с такой проблемой, как выбросы в данных или OOD (out of distribution), и ищет пути решения проблем, возникающих из-за них.

https://habr.com/ru/articles/988736/

#выбросы #анализ_данных #data_science #preprocessing #compression #outliner #custom_transformer #transformer #sklearn

Компрессор для данных или как я написал свой первый custom transformer

Эта статья будет полезна DS специалистам, и тем, кто хоть когда-нибудь сталкивался с такой проблемой, как выбросы в данных или OOD (out of distribution), и ищет пути решения проблем, возникающих из-за них.

https://habr.com/ru/articles/988736/

#выбросы #анализ_данных #data_science #preprocessing #compression #outliner #custom_transformer #transformer #sklearn

Компрессор для данных или как я написал свой первый custom transformer

Эта статья будет полезна DS специалистам, и тем, кто хоть когда-нибудь сталкивался с такой проблемой, как выбросы в данных или OOD (out of distribution), и ищет пути решения проблем, возникающих из-за них.

https://habr.com/ru/articles/988736/

#выбросы #анализ_данных #data_science #preprocessing #compression #outliner #custom_transformer #transformer #sklearn

Pipeline release! nf-core/sarek v3.7.1 - 3.7.1 - Buollámtjåhkka!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.7.1

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/sarek v3.7.0 - 3.7.0 - Saltoluokta!
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.7.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

#GESISMethodsHub #ResearchTools #OpenScience #SocialMedia #PreProcessing

Your data needs some pre-processing before analysis? Methods Hub has you covered.

Extract entities from social media posts such as hashtags or emojis that serve as indicators in further analysis:
➡️ https://doi.org/10.71627/extract_urls_mentions_hashtags

Inspect your data for implicit biases before using it as training material in machine learning:
➡️ https://doi.org/10.71627/weat

Or explore more at:
➡️ https://methodshub.gesis.org/

Pipeline release! nf-core/sarek v3.6.1 - Sarek 3.6.1 - Sjnjierák!

Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.6.1

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/sarek v3.6.0 - Sarek 3.6.0 - Kvikkjokk!

Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.6.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/sarek v3.5.1 - 3.5.1 - Akkatjåkkå!

Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.5.1

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/sarek v3.5.0 - 3.5.0 - Áhkájiegna!

Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.5.0

#annotation #cancer #gatk4 #genomics #germline #preprocessing #somatic #targetpanels #variantcalling #wholeexomesequencing #wholegenomesequencing #nfcore #openscience #nextflow #bioinformatics

Analysis-Ready, Cloud Optimized ERA5
--
https://github.com/google-research/arco-era5 <-- git hub repository
--
I am trying to understand all the technical details and use case(s) for this project, but I will get there – but thought others might find it of interest..
#GIS #spatial #mapping #remotesensing #ARCO #ERA5 #global #spatialanalysis #spatiotemporal #code #model #modeling #visualisation #global #GitHub #opensource #hourly #GoogleCloudPublicDatasets #climate #climatechange #ECMWF #atmosphere #weather #extremeweather #NWP #weatherprediction #numericalweatherprediction #meteorology #interpolation #preprocessing #dataprovenance

Analysis-Ready, Cloud Optimized ERA5
--
https://github.com/google-research/arco-era5 <-- git hub repository
--
I am trying to understand all the technical details and use case(s) for this project, but I will get there – but thought others might find it of interest..
#GIS #spatial #mapping #remotesensing #ARCO #ERA5 #global #spatialanalysis #spatiotemporal #code #model #modeling #visualisation #global #GitHub #opensource #hourly #GoogleCloudPublicDatasets #climate #climatechange #ECMWF #atmosphere #weather #extremeweather #NWP #weatherprediction #numericalweatherprediction #meteorology #interpolation #preprocessing #dataprovenance

Analysis-Ready, Cloud Optimized ERA5
--
https://github.com/google-research/arco-era5 <-- git hub repository
--
I am trying to understand all the technical details and use case(s) for this project, but I will get there – but thought others might find it of interest..
#GIS #spatial #mapping #remotesensing #ARCO #ERA5 #global #spatialanalysis #spatiotemporal #code #model #modeling #visualisation #global #GitHub #opensource #hourly #GoogleCloudPublicDatasets #climate #climatechange #ECMWF #atmosphere #weather #extremeweather #NWP #weatherprediction #numericalweatherprediction #meteorology #interpolation #preprocessing #dataprovenance

Analysis-Ready, Cloud Optimized ERA5
--
https://github.com/google-research/arco-era5 <-- git hub repository
--
I am trying to understand all the technical details and use case(s) for this project, but I will get there – but thought others might find it of interest..
#GIS #spatial #mapping #remotesensing #ARCO #ERA5 #global #spatialanalysis #spatiotemporal #code #model #modeling #visualisation #global #GitHub #opensource #hourly #GoogleCloudPublicDatasets #climate #climatechange #ECMWF #atmosphere #weather #extremeweather #NWP #weatherprediction #numericalweatherprediction #meteorology #interpolation #preprocessing #dataprovenance

Analysis-Ready, Cloud Optimized ERA5
--
https://github.com/google-research/arco-era5 <-- git hub repository
--
I am trying to understand all the technical details and use case(s) for this project, but I will get there – but thought others might find it of interest..
#GIS #spatial #mapping #remotesensing #ARCO #ERA5 #global #spatialanalysis #spatiotemporal #code #model #modeling #visualisation #global #GitHub #opensource #hourly #GoogleCloudPublicDatasets #climate #climatechange #ECMWF #atmosphere #weather #extremeweather #NWP #weatherprediction #numericalweatherprediction #meteorology #interpolation #preprocessing #dataprovenance

Unlock the secrets of data cleaning and preprocessing with tutorial using the Titanic dataset. Perfect for aspiring data scientists and Python enthusiasts! #DataScience #Python #MachineLearning #DataCleaning #Preprocessing

https://teguhteja.id/master-data-cleaning-and-preprocessing-with-the-titanic-dataset/

This morning I finished another post on my tiny blog, this time about how I set up automatic image pre-processing in @eleventy to maintain a perfect Lighthouse score while allowing myself to be lazy about images: https://www.martingunnarsson.com/posts/eleventy-automatic-image-pre-processing/

#eleventy #11ty #web #webdev #webdevelopment #image #images #processing #preprocessing #performance #webperformance #lighthouse

A new benchmark for data 📚
Rather than test if a model is good
This tests whether you can filter data
360 languages

They also share metrics for data redundancy if you want just those
https://arxiv.org/abs/2311.06440
https://github.com/toizzy/
#data #preprocessing #dedup #enough2skim #NLP #NLProc

So this is the #inofficial #opening of #ICFCA2023 with a talk by Johannes Hirth on #preprocessing and #scaling contextual data.

Extremely noticeable #KNOWLEDGE GAPS of ChatGPT in the #history of #Holocaust-related art claims make it clearer than ever the urgency of understanding the data #pipelines that feed the #AI language model.

What #filters are used in #OpenAI's data #preprocessing to EXCLUDE information? Who decides which information to exclude? What triggers exclusion?

#ChatGPT fills gaps with plausible -sounding disinformation - which is a disaster

#EHRI #YadVashem #memory #looted #histodon #tech #FAIR

I decided to ditch CodeKit app as I made the mistake of looking at the developer's tweets and he... is not the kind of person I want to support.

I'm trying out Prepros which seems to work nicely, in fact it went without a hitch whereas it took me a while to get CodeKit working with SSL.

#development #webdev #webdevelopment #sass #preprocessing

https://prepros.io

#OpenScience #metascience #reactiontime #preprocessing

One Hot Encoding categorical data is an important part of pre-processing for machine and deep learning models.

...but are you using the best method to achieve it?

https://towardsdatascience.com/the-best-methods-for-one-hot-encoding-your-data-c29c78a153fd

#DataScience #MachineLearning
#deeplearning #onehotencoding #preprocessing

Can the Continuous Wavelet Transform (CWT) improve the predictions of your deep / machine learning models?

Reduced chance of over-fitting to noise, or other anomalies, in your raw data. Resulting in simpler lightweight models.

A powerful preprocessing technique.

https://medium.com/mlearning-ai/the-power-of-the-continuous-wavelet-transform-cwt-in-machine-learning-980e80ecfb8a

#wavelets #wavelet #cwt #dwt #MachineLearning #deeplearning #datascience #NeuralNetworks #preprocessing

The newest revision of our small animal brain registration pipeline and benchmarking article, as accepted for review <3

https://www.biorxiv.org/content/10.1101/619650v2

#freeandopenscience #freeanimalresearch #neuroscience #fMRI #preprocessing #smallanmimalMRI #FOSS #SAMRI #ANTs #Python #RepSeP

#OpenScience #metascience #reactiontime #preprocessing

#OpenScience #metascience #reactiontime #preprocessing

#OpenScience #metascience #reactiontime #preprocessing

So this is the #inofficial #opening of #ICFCA2023 with a talk by Johannes Hirth on #preprocessing and #scaling contextual data.

So this is the #inofficial #opening of #ICFCA2023 with a talk by Johannes Hirth on #preprocessing and #scaling contextual data.

So this is the #inofficial #opening of #ICFCA2023 with a talk by Johannes Hirth on #preprocessing and #scaling contextual data.