#freeanimalresearch — Public Fediverse posts

The newest revision of our small animal brain registration pipeline and benchmarking article, as accepted for review <3

https://www.biorxiv.org/content/10.1101/619650v2

#freeandopenscience #freeanimalresearch #neuroscience #fMRI #preprocessing #smallanmimalMRI #FOSS #SAMRI #ANTs #Python #RepSeP

Doctor of Science, accomplished
🎓
by developing a new assay for monoaminergic function and psychopharmacological profiling in vivo – and the infrastructure to support it.

https://youtu.be/WrliLYF0SBY

#neuroscience #fMRI #freeanimalresearch #freeandopenscience #FOSS #Gentoo #Linux #optogenetics #ETH #ETHZurich #neuroimaging #biomedical

Our flagship MRI workflow package just reached more commits than there have been years since the birth of Christ. As you would expect, we owe this to abundant work, and scant commit discipline XD

#MRI #freeandopensourcescience #FOSS #freeanimalresearch #Python

https://github.com/IBT-FMI/SAMRI

Our newest manuscript --- improving transparency, inter-study comparability, and robustness of preclinical MRI registration --- is out. Get it while it's hot!

#freeandopenscience #nipype #samri #fmri #datascience #freeanimalresearch #neuroscience

https://www.biorxiv.org/content/10.1101/619650v1

fMRI preprocessing and data analysis intro, using animal data and cutting-edge software, including #RepSeP, #SAMRI, #nilearn, and #nipype.

#ethzurich #zurich #freeandopenscience #sciencecommunication #freeanimalresearch #openeducation

https://youtu.be/ePamp9v5Z0U

2018-01 Picture of the Month at the Animal Imaging Center:

Visual Inspection of multi-session registration coherence - with #SAMRI (https://github.com/IBT-FMI/SAMRI).

#openscience #freeanimalresearch https://social.tchncs.de/media/rRd5oQ6DHUzY8ylrAB8