home.social

#exome — Public Fediverse posts

Live and recent posts from across the Fediverse tagged #exome, aggregated by home.social.

  1. Pipeline release! nf-core/oncoanalyser v2.3.0 - 2.3.0 - Spotted Nightjar!
    A comprehensive cancer DNA/RNA analysis and reporting pipeline
    Please see the changelog: github.com/nf-core/oncoanalyse

    #cancer #clinical #dna #exome #ngs #panel #rna #targeted #wgs #wigits #wts #nfcore #openscience #nextflow #bioinformatics

  2. Pipeline release! nf-core/oncoanalyser v2.3.0 - 2.3.0 - Spotted Nightjar!
    A comprehensive cancer DNA/RNA analysis and reporting pipeline
    Please see the changelog: github.com/nf-core/oncoanalyse

    #cancer #clinical #dna #exome #ngs #panel #rna #targeted #wgs #wigits #wts #nfcore #openscience #nextflow #bioinformatics

  3. Pipeline release! nf-core/oncoanalyser v2.3.0 - 2.3.0 - Spotted Nightjar!
    A comprehensive cancer DNA/RNA analysis and reporting pipeline
    Please see the changelog: github.com/nf-core/oncoanalyse

    #cancer #clinical #dna #exome #ngs #panel #rna #targeted #wgs #wigits #wts #nfcore #openscience #nextflow #bioinformatics

  4. Pipeline release! nf-core/oncoanalyser v2.3.0 - 2.3.0 - Spotted Nightjar!
    A comprehensive cancer DNA/RNA analysis and reporting pipeline
    Please see the changelog: github.com/nf-core/oncoanalyse

    #cancer #clinical #dna #exome #ngs #panel #rna #targeted #wgs #wigits #wts #nfcore #openscience #nextflow #bioinformatics

  5. Pipeline release! nf-core/oncoanalyser v2.3.0 - 2.3.0 - Spotted Nightjar!
    A comprehensive cancer DNA/RNA analysis and reporting pipeline
    Please see the changelog: github.com/nf-core/oncoanalyse

    #cancer #clinical #dna #exome #ngs #panel #rna #targeted #wgs #wigits #wts #nfcore #openscience #nextflow #bioinformatics

  6. Illumina’s constellation tech a star in Genedx pilot

    Genedx LLC partnered with Illumina Inc. to test whether Illumina’s constellation map read technology could shed light on…
    #NewsBeep #News #Genetics #BioWorldMedTech #clinical #Constellation #Diagnostics #exome #GeneDx #Genomics #IlluminaInc. #Medtech #Neonatal/pediatrics #NewbornScreening #Novaseq #Science #U.S. #UK #UnitedKingdom
    newsbeep.com/uk/203924/

  7. Back from #Zakopane 🇵🇱 from the Annual Meeting of the Research Consortium on #T1D #Exome Studies in Central and Eastern #Europe. 🧬🔍 And no, you’re not the only one wondering what a psychologist was doing at a conference knee-deep in sequencing data and genetic variants. But science, like life, has a funny way of connecting people. A chance encounter years ago in Michigan led me here: a collaboration on the largest exome sequencing study for Type 1 #Diabetes in this part of the world! ✨ More info (hopefully) soon. 🤫 genes.uzhnu.edu.ua/ 🇺🇦

  8. Back from #Zakopane 🇵🇱 from the Annual Meeting of the Research Consortium on #T1D #Exome Studies in Central and Eastern #Europe. 🧬🔍 And no, you’re not the only one wondering what a psychologist was doing at a conference knee-deep in sequencing data and genetic variants. But science, like life, has a funny way of connecting people. A chance encounter years ago in Michigan led me here: a collaboration on the largest exome sequencing study for Type 1 #Diabetes in this part of the world! ✨ More info (hopefully) soon. 🤫 genes.uzhnu.edu.ua/ 🇺🇦

  9. Back from #Zakopane 🇵🇱 from the Annual Meeting of the Research Consortium on #T1D #Exome Studies in Central and Eastern #Europe. 🧬🔍 And no, you’re not the only one wondering what a psychologist was doing at a conference knee-deep in sequencing data and genetic variants. But science, like life, has a funny way of connecting people. A chance encounter years ago in Michigan led me here: a collaboration on the largest exome sequencing study for Type 1 #Diabetes in this part of the world! ✨ More info (hopefully) soon. 🤫 genes.uzhnu.edu.ua/ 🇺🇦

  10. Large UK biobank #exome sequencing study identifies gene variants associated with socioeconomic status (income, education,...). (No, these variants do *not determine* your income.) #genetics #sociology
    pnas.org/doi/abs/10.1073/pnas.

  11. Large UK biobank #exome sequencing study identifies gene variants associated with socioeconomic status (income, education,...). (No, these variants do *not determine* your income.) #genetics #sociology
    pnas.org/doi/abs/10.1073/pnas.

  12. Large UK biobank #exome sequencing study identifies gene variants associated with socioeconomic status (income, education,...). (No, these variants do *not determine* your income.) #genetics #sociology
    pnas.org/doi/abs/10.1073/pnas.

  13. nature.com/articles/s41525-024 A cost-effective sequencing method for genetic studies combining high-depth whole #exome and low-depth whole #genome #genomics

  14. nature.com/articles/s41525-024 A cost-effective sequencing method for genetic studies combining high-depth whole #exome and low-depth whole #genome #genomics

  15. nature.com/articles/s41525-024 A cost-effective sequencing method for genetic studies combining high-depth whole #exome and low-depth whole #genome #genomics

  16. nature.com/articles/s41588-023

    "Public platform with 39,472 #exome control samples enables association studies without genotype sharing"

    We provide access to a library of 39,472 exome sequencing controls at dnascore.net enabling association studies for case cohorts lacking control subjects. Using this approach, control sets can be selected from this online library with a prespecified matching accuracy, ensuring well-calibrated association analysis for both rare and common variants.

  17. nature.com/articles/s41588-023

    "Public platform with 39,472 #exome control samples enables association studies without genotype sharing"

    We provide access to a library of 39,472 exome sequencing controls at dnascore.net enabling association studies for case cohorts lacking control subjects. Using this approach, control sets can be selected from this online library with a prespecified matching accuracy, ensuring well-calibrated association analysis for both rare and common variants.

  18. nature.com/articles/s41588-023

    "Public platform with 39,472 #exome control samples enables association studies without genotype sharing"

    We provide access to a library of 39,472 exome sequencing controls at dnascore.net enabling association studies for case cohorts lacking control subjects. Using this approach, control sets can be selected from this online library with a prespecified matching accuracy, ensuring well-calibrated association analysis for both rare and common variants.

  19. The Mexico City Prospective Study is a prospective cohort of more than 150,000 adults recruited two decades ago from the urban districts of Coyoacán and Iztapalapa in Mexico City. Here we generated genotype and exome-sequencing data for all individuals and whole-genome sequencing data for 9,950 selected individuals. #isogg #dna #mexico #geneadons #nature #genetics #exome #indigenous #wholegenomesequencing

    nature.com/articles/s41586-023

  20. The Mexico City Prospective Study is a prospective cohort of more than 150,000 adults recruited two decades ago from the urban districts of Coyoacán and Iztapalapa in Mexico City. Here we generated genotype and exome-sequencing data for all individuals and whole-genome sequencing data for 9,950 selected individuals. #isogg #dna #mexico #geneadons #nature #genetics #exome #indigenous #wholegenomesequencing

    nature.com/articles/s41586-023

  21. The Mexico City Prospective Study is a prospective cohort of more than 150,000 adults recruited two decades ago from the urban districts of Coyoacán and Iztapalapa in Mexico City. Here we generated genotype and exome-sequencing data for all individuals and whole-genome sequencing data for 9,950 selected individuals. #isogg #dna #mexico #geneadons #nature #genetics #exome #indigenous #wholegenomesequencing

    nature.com/articles/s41586-023

  22. A new #preprint #OpenScience #PeerReview by @PCIgenomics: G. Aubert et al. #SNP discovery by #exome capture and resequencing in a #pea genetic resource collection. #bioRxiv doi.org/10.1101/2022.08.03.502 🔽

  23. A new #preprint #OpenScience #PeerReview by @PCIgenomics: G. Aubert et al. #SNP discovery by #exome capture and resequencing in a #pea genetic resource collection. #bioRxiv doi.org/10.1101/2022.08.03.502 🔽

  24. A new #preprint #OpenScience #PeerReview by @PCIgenomics: G. Aubert et al. #SNP discovery by #exome capture and resequencing in a #pea genetic resource collection. #bioRxiv doi.org/10.1101/2022.08.03.502 🔽

  25. Polygenic architecture of rare coding variation across 400,000 exomes medrxiv.org/content/10.1101/20 #genomics #genome #burden #exome "Here, we quantify the heritability explained by gene-wise burden of rare coding variants and compare the genetic architecture of common and rare variation across 22 common traits and diseases in 400,000 #UKBiobank exomes"

  26. Polygenic architecture of rare coding variation across 400,000 exomes medrxiv.org/content/10.1101/20 #genomics #genome #burden #exome "Here, we quantify the heritability explained by gene-wise burden of rare coding variants and compare the genetic architecture of common and rare variation across 22 common traits and diseases in 400,000 #UKBiobank exomes"

  27. Polygenic architecture of rare coding variation across 400,000 exomes medrxiv.org/content/10.1101/20 #genomics #genome #burden #exome "Here, we quantify the heritability explained by gene-wise burden of rare coding variants and compare the genetic architecture of common and rare variation across 22 common traits and diseases in 400,000 #UKBiobank exomes"

  28. ÉCOLE: Learning to call copy number variants on whole #exome #sequencing data #wes biorxiv.org/content/10.1101/20 #CNV "Based on a variant of the transformer architecture, the model learns to call CNVs per exon, using high confidence calls made on matched WGS samples. We further train and fine-tune the model with a small set of expert calls via transfer learning. "

  29. ÉCOLE: Learning to call copy number variants on whole #exome #sequencing data #wes biorxiv.org/content/10.1101/20 #CNV "Based on a variant of the transformer architecture, the model learns to call CNVs per exon, using high confidence calls made on matched WGS samples. We further train and fine-tune the model with a small set of expert calls via transfer learning. "