#proteinfolding — Public Fediverse posts

#LessSocialMediaMoreLife #MisfoldedProteins #ProteinFolding #Type2Diabetes #AlzheimersDisease #MetabolicSyndrome #wellnessatwork #wellnessquotes #physicalwellbeing #Health #Science #MedicalResearch #Disease #LessSocialMediaMoreLife https://mastodon.social/@biohackingpathway/116342357588783749

#LessSocialMediaMoreLife #MisfoldedProteins #ProteinFolding #Type2Diabetes #AlzheimersDisease #MetabolicSyndrome #wellnessatwork #wellnessquotes #physicalwellbeing #Health #Science #MedicalResearch #Disease #LessSocialMediaMoreLife https://mastodon.social/@biohackingpathway/116342357588783749

Pipeline release! nf-core/proteinfold v2.0.0 - Montseny Brook Newt!
Protein 3D structure prediction pipeline
Please see the changelog: https://github.com/nf-core/proteinfold/releases/tag/2.0.0

#alphafold2 #colabfold #esmfold #proteinfoldprediction #proteinfolding #proteinsequences #proteinstructure #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/proteinfold v2.0.0 - Montseny Brook Newt!
Protein 3D structure prediction pipeline
Please see the changelog: https://github.com/nf-core/proteinfold/releases/tag/2.0.0

#alphafold2 #colabfold #esmfold #proteinfoldprediction #proteinfolding #proteinsequences #proteinstructure #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/proteinfold v2.0.0 - Montseny Brook Newt!
Protein 3D structure prediction pipeline
Please see the changelog: https://github.com/nf-core/proteinfold/releases/tag/2.0.0

#alphafold2 #colabfold #esmfold #proteinfoldprediction #proteinfolding #proteinsequences #proteinstructure #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/proteinfold v2.0.0 - Montseny Brook Newt!
Protein 3D structure prediction pipeline
Please see the changelog: https://github.com/nf-core/proteinfold/releases/tag/2.0.0

#alphafold2 #colabfold #esmfold #proteinfoldprediction #proteinfolding #proteinsequences #proteinstructure #nfcore #openscience #nextflow #bioinformatics

🧬 Can salt levels change how cell-penetrating peptides behave at membranes?

🔗 Molecular dynamics simulations unveil the aggregation patterns and salting out of polyarginines at zwitterionic POPC bilayers in solutions of various ionic strengths. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2024.11.004

📚 CSBJ: https://www.csbj.org/

#MolecularDynamics #PeptideAggregation #MembraneProtein #Biophysics #StructuralBiology #ProteinFolding #MembraneBiology

👨‍🔬🔍 Apparently, the secret to protein folding was hiding in the 400 Bad Request error all along! Who knew server security policies were the key to solving scientific mysteries? 🧪🔒
https://phys.org/news/2025-03-protein-mystery-core-fractions.html #proteinfolding #serversecurity #scientificbreakthrough #400BadRequest #technologynews #HackerNews #ngated

A protein folding mystery solved: Study explains core packing fractions

https://phys.org/news/2025-03-protein-mystery-core-fractions.html

#HackerNews #proteinfolding #science #research #corepacking #fractions #mysterysolved

https://youtube.com/watch?v=P_fHJIYENdI&si=ECF7pagdnAgEwT4Z

Veritasium just released a great video of #ProteinFolding algorithms and #AlphaFold as part of the story.

The Veritasium team releases some of the best science videos around: accessible, clear and accurate. It's a great service to communicate this breakthrough to everyone.

#ScientificComputing #Bioinformatics #AI #MachineLearning #ScienceCommunication #ProteinDesign

P.S. shame about the anthropomorphic hype at the end

On this note: are you interested in #tech, #selfHosting, #science, #computationalScience, #HPC, #liberatoryTech, or just #POSIX in general but otherwise lack the resources, financial or otherwise? Get in touch with me and we can have a chat about maybe getting you some time. I can't promise when things will be ready or how much I can offer, but.

No generative AI training, please. 'Classic' ML that doesn't generate trash, contribute to surveillance, or rely on stolen data is fine though.

EDIT: please feel free to boost! DMs for initial contact are fine; while I run my server, I do not run yours so just a hello and a general area of interest are all I ask that you put in there. If you feel a project or interest is sensitive we can arrange another chat medium from there. I just wanna get a sense of who you are since I'll be, you know, letting you access the computer sitting in my office lmao.

EDIT 2: I can also specifically help to some degree if you're interested in learning about #computationalChemistry, #proteinFolding, or running a few different types of #simulations.

EDIT 3: If you're interested in writing/deploying/understanding #webDesign, #webTech, etc, that's also possible. I'm not trying to limit anything here, mostly just tagging with what things I know.

EDIT 4: jesus christ Audrey. Anyway, "a sense of who you are" does NOT have to include personally identifying information. I mean much more informal and useful stuff than that, such as what you're interested in and wanna work on. I want you to get to know me a little bit, too, because we'll both need a degree of trust and if you feel you can't trust me then please don't force yourself to.

RE: https://fire.asta.lgbt/notes/a3911f2wi43200mf

4-JAN-2024
Scientists tame chaotic protein fueling 75% of cancers
Discovery opens window to more effective treatment

https://www.eurekalert.org/news-releases/1030250 #science #nanoworld #IntrinsicallyDisorderedProteins #myc #cancer #proteins #ProteinFolding

Just watched a couple of brilliant YouTube videos by biologist Jake Brown

Cells aren’t fancy clockwork machines: https://youtube.com/watch?v=jPhvic-eqbc
(Further reading: https://www.subanima.org/veritasium/)

Mendel wasn’t a Mendelian: https://youtube.com/watch?v=zpIqQ0pGs1E
(Further reading: https://www.subanima.org/mendel/)

(I was going to support Jake via his Patreon page, but unfortunately he’s not accepting new subscribers at the moment)

#CellBiology #genetics #MendelianInheritance #Mendel #ProteinStructure #ProteinFolding #TeachingBiology #SRYgene #CancerGenes #HumanGenomeProject #SystemsBiology #WaddingtonLandscape

Lasker prize to Jumper and Hassabis for AlphaFold!

#ProteinStructure
#ProteinFolding

https://laskerfoundation.org/winners/alphafold-a-technology-for-predicting-protein-structures/

19-JUL-2023
New method expertly evaluates protein folding stability on a large scale

https://www.eurekalert.org/news-releases/995603 title of the paper in Nature isn't much clearer: Mega-scale experimental analysis of protein folding stability in biology and design, #science #nanoworld #ProteinFolding #ProteinStability #proteins

re-#Introduction with new handle after move to fediscience.org #ScienceMastodon

Hi, I'm Sven, a #structural #biochemist who recently moved from #Dundee, Scotland to #Boston, MA to start a #postdoc in the Brown lab at #HarvardMedicalSchool.

My broad interests are #structuralbiology
#cryoEM
#cilia
#ubiquitin
#biophysics
#proteinfolding #proteinengineering
#methods
#CellBiology

Looking to build a network on here! 🤝 😄

#introduction

Hello! I'm an assistant professor at #Pitt. I do research on the molecular mechanisms of protein homeostasis in the retina. I also work in developing novel AAV systems with expanded capabilities.

My interests are in #ProteinFolding, #proteostasis, #chaperones, #retina #AAV, #StructuralBiology, #Biophysics, #cryoEM, and #CRISPRi screens.

Hi all, this is my #introduction.
I am a postdoc working in the #biology department at #Stanford University; research in #cellbiology & #biochemistry. Interests: #ribosome #RQC #ubiquitin #UBLs #proteinqualitycontrol #proteinfolding #endoplasmicreticulum.
I hope to connect with other researchers here!