#proteinfolding — Public Fediverse posts
Live and recent posts from across the Fediverse tagged #proteinfolding, aggregated by home.social.
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Pipeline release! nf-core/proteinfold v2.0.0 - Montseny Brook Newt!
Protein 3D structure prediction pipeline
Please see the changelog: https://github.com/nf-core/proteinfold/releases/tag/2.0.0#alphafold2 #colabfold #esmfold #proteinfoldprediction #proteinfolding #proteinsequences #proteinstructure #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/proteinfold v2.0.0 - Montseny Brook Newt!
Protein 3D structure prediction pipeline
Please see the changelog: https://github.com/nf-core/proteinfold/releases/tag/2.0.0#alphafold2 #colabfold #esmfold #proteinfoldprediction #proteinfolding #proteinsequences #proteinstructure #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/proteinfold v2.0.0 - Montseny Brook Newt!
Protein 3D structure prediction pipeline
Please see the changelog: https://github.com/nf-core/proteinfold/releases/tag/2.0.0#alphafold2 #colabfold #esmfold #proteinfoldprediction #proteinfolding #proteinsequences #proteinstructure #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/proteinfold v2.0.0 - Montseny Brook Newt!
Protein 3D structure prediction pipeline
Please see the changelog: https://github.com/nf-core/proteinfold/releases/tag/2.0.0#alphafold2 #colabfold #esmfold #proteinfoldprediction #proteinfolding #proteinsequences #proteinstructure #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/proteinfold v2.0.0 - Montseny Brook Newt!
Protein 3D structure prediction pipeline
Please see the changelog: https://github.com/nf-core/proteinfold/releases/tag/2.0.0#alphafold2 #colabfold #esmfold #proteinfoldprediction #proteinfolding #proteinsequences #proteinstructure #nfcore #openscience #nextflow #bioinformatics
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MIT engineers design proteins by their motion, not just their shape | MIT News
Proteins are far more than nutrients we track on a food label. Present in every cell of our…
#NewsBeep #News #Technology #AIandproteindesign #AU #Australia #BoNi #Buehlerlab #generativeaiinhealthcare #MarkusBuehler #MITcivilandenvironmentalengineering #MITMechE #MIT-IBMWatsonAIlab #molecularmachines #physics-awareAI #proteinfolding #Vibecoding #VibeGen
https://www.newsbeep.com/au/566413/ -
MIT engineers design proteins by their motion, not just their shape | MIT News
Proteins are far more than nutrients we track on a food label. Present in every cell of our…
#NewsBeep #News #Technology #AIandproteindesign #AU #Australia #BoNi #Buehlerlab #generativeaiinhealthcare #MarkusBuehler #MITcivilandenvironmentalengineering #MITMechE #MIT-IBMWatsonAIlab #molecularmachines #physics-awareAI #proteinfolding #Vibecoding #VibeGen
https://www.newsbeep.com/au/566413/ -
`Surprisingly..extracted diffusion coefficient at the free energy barrier on the number of native contacts coordinate increases with protein length. This facilitation..in larger proteins is explained by increased cooperative native contact formation during folding, which reduces the roughness of the energy landscape... evolutionary optimization of the energy landscape..more efficient for protein folding than for other biomolecular processes`
https://doi.org/10.1103/2q9m-4scc
#proteinFolding #biophysics -
From child prodigy to a race to be the one that puts humans in a zoo. Great look into our current trajectory. Who will wield the stick?
https://www.tribecafilm.com/films/thinking-game-2024
#DemisHassabis #AGI #AI #LLM #DeepMind #Google #Geopolitics #ProteinFolding #Science #ThinkingGame #MachineLearning #Energy
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QbitAI Exclusive: Interview with Terence Tao https://www.byteseu.com/1869574/ #AIPopularization #AIXScience #BasicScientificResearch #DataQuality #hallucinations #interpretability #mathematics #ProteinFolding #RichardSutton #SAIRFoundation #ScalingTheScienceOfAI #Science #StandardizedCitations #SyntheticData #TerenceTao #traceability
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When Google restricted AlphaFold 3's commercial use, three MIT PhD students rebuilt the protein folding model in four months. Their open-source version, Boltz-1, now has $28M in funding and a Pfizer partnership. The move highlights tensions between proprietary AI research and scientific openness in drug discovery infrastructure. #OpenScience #ProteinFolding #AIResearch https://www.implicator.ai/when-google-locked-the-door-three-mit-students-picked-the-lock/
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Five years after AlphaFold reshaped protein folding, its open‑source spirit lives on in Gemini 2.0 – an AI co‑scientist that can argue hypotheses with a principal investigator. Could an agentic system become a true research partner? Dive into the debate and see how open science fuels the next leap. #AlphaFold #Gemini2 #AgenticSystem #ProteinFolding
🔗 https://aidailypost.com/news/alphafold-marks-5-years-new-gemini-20-ai-coscientist-debates
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Why proteins fold and how GPUs help us fold
https://aval.bearblog.dev/nvidiaproteins/
#HackerNews #proteinfolding #GPUs #science #technology #research
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AlphaFold - The Single Most Important AI Breakthrough
https://www.youtube.com/watch?v=Vhcwjzeukts
#AlphaFold #AI #ML #MachineLearning #TwoMinutePapers #Google #DeepMind #Biology #ProteinFolding #Science #NobelPrize
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🧬 Can salt levels change how cell-penetrating peptides behave at membranes?
🔗 Molecular dynamics simulations unveil the aggregation patterns and salting out of polyarginines at zwitterionic POPC bilayers in solutions of various ionic strengths. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2024.11.004
📚 CSBJ: https://www.csbj.org/
#MolecularDynamics #PeptideAggregation #MembraneProtein #Biophysics #StructuralBiology #ProteinFolding #MembraneBiology
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🧬 How do changes in a non-catalytic residue collapse an entire enzyme’s function?
🔗 Conformational plasticity links structural instability of NAA10F128I and NAA10F128L mutants to their catalytic deregulation. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2024.11.014
📚 CSBJ: https://www.csbj.org/
#Biophysics #Enzymology #StructuralBiology #Mutations #ProteinFolding
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Scientists Build Smallest Engine Ever, Hotter Than the Sun and Powered by Randomness
AI generated image. Scientists have built the world’s smallest engine. It consists of a single microscopic particle, smaller…
#NewsBeep #News #US #USA #UnitedStates #UnitedStatesOfAmerica #Physics #alphafold #analoguecomputing #King'sCollegeLondon #microscopicengine #molecularmachines #Nanotechnology #proteinfolding #Science #stochasticphysics
https://www.newsbeep.com/us/245211/ -
Scientists Build Smallest Engine Ever, Hotter Than the Sun and Powered by Randomness
AI generated image. Scientists have built the world’s smallest engine. It consists of a single microscopic particle, smaller…
#NewsBeep #News #US #USA #UnitedStates #UnitedStatesOfAmerica #Physics #alphafold #analoguecomputing #King'sCollegeLondon #microscopicengine #molecularmachines #Nanotechnology #proteinfolding #Science #stochasticphysics
https://www.newsbeep.com/us/245211/ -
Scientists Build Smallest Engine Ever, Hotter Than the Sun and Powered by Randomness
AI generated image. Scientists have built the world’s smallest engine. It consists of a single microscopic particle, smaller…
#NewsBeep #News #Physics #alphafold #analoguecomputing #AU #Australia #King'sCollegeLondon #microscopicengine #molecularmachines #Nanotechnology #proteinfolding #Science #stochasticphysics
https://www.newsbeep.com/au/232670/ -
SimpleFold: Folding Proteins Is Simpler Than You Think
https://github.com/apple/ml-simplefold
#HackerNews #SimpleFold #Folding #Proteins #AI #Research #Bioinformatics #ProteinFolding #GitHub
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SimpleFold: Folding Proteins Is Simpler Than You Think
https://github.com/apple/ml-simplefold
#HackerNews #SimpleFold #Folding #Proteins #AI #Research #Bioinformatics #ProteinFolding #GitHub
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SimpleFold: Folding Proteins Is Simpler Than You Think
https://github.com/apple/ml-simplefold
#HackerNews #SimpleFold #Folding #Proteins #AI #Research #Bioinformatics #ProteinFolding #GitHub
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SimpleFold: Folding Proteins Is Simpler Than You Think
https://github.com/apple/ml-simplefold
#HackerNews #SimpleFold #Folding #Proteins #AI #Research #Bioinformatics #ProteinFolding #GitHub
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SimpleFold: Folding Proteins Is Simpler Than You Think
https://github.com/apple/ml-simplefold
#HackerNews #SimpleFold #Folding #Proteins #AI #Research #Bioinformatics #ProteinFolding #GitHub
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SciSparc Launches Quantum Computing Drug Discovery Platform
SciSparc (NASDAQ:SPRC), a clinical-stage pharmaceutical company, announced its b…
#NewsBeep #News #US #USA #UnitedStates #UnitedStatesOfAmerica #Computing #3Dproteinmodeling #AIdrugdevelopment #biotechinitiative #drugdesign #Drugdiscovery #neurologicaldisorders #pharmaceuticaltechnology #proteinfolding #QuantumAlgorithms #Quantumcomputing #SciSparc #SPRC #structuralbiology #Technology
https://www.newsbeep.com/us/180821/ -
SciSparc Launches Quantum Computing Drug Discovery Platform
SciSparc (NASDAQ:SPRC), a clinical-stage pharmaceutical company, announced its b…
#NewsBeep #News #US #USA #UnitedStates #UnitedStatesOfAmerica #Computing #3Dproteinmodeling #AIdrugdevelopment #biotechinitiative #drugdesign #Drugdiscovery #neurologicaldisorders #pharmaceuticaltechnology #proteinfolding #QuantumAlgorithms #Quantumcomputing #SciSparc #SPRC #structuralbiology #Technology
https://www.newsbeep.com/us/180821/ -
💥 Революция в биохимии! ИИ научился предсказывать и даже создавать белки 🧬. AlphaFold и Rosetta меняют всё: от медицины до экологии. Это начало новой эры в науке! 🔬🤖 #AlphaFold #ИИ #биохимия #наука #технологии #NobelPrize #AI #биотех #proteinfolding #DeepMind
Подробнее: https://scientia-et-innovatio.blogspot.com/2025/05/blog-post.html
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Dr. Ali Hassanali from the Abdus Salam International Centre for Theoretical Physics (ICTP) is back with a new lecture! This time, Ali discusses the role of amide bonds and dipole moments in the dynamics and stability of protein folding. He investigates how amino acid sequences transform from unfolded to folded states, emphasizing the various interactions that play a crucial role in this fundamental biological process.
🎥 You can access this hashtag#OpenAccess lecture for free on Enabla and engage in meaningful online discussions with Dr. Hassanali and the Enabla community regarding protein folding dynamics and stability: https://enabla.com/pub/1024/about
This is a fantastic opportunity to expand your understanding of protein structure and the factors influencing it, including external conditions like pH and temperature, as well as the impact of post-translational modifications.
#Biophysics #ProteinFolding #MolecularBiology #OpenScience #AminoAcids
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👨🔬🔍 Apparently, the secret to protein folding was hiding in the 400 Bad Request error all along! Who knew server security policies were the key to solving scientific mysteries? 🧪🔒
https://phys.org/news/2025-03-protein-mystery-core-fractions.html #proteinfolding #serversecurity #scientificbreakthrough #400BadRequest #technologynews #HackerNews #ngated -
A protein folding mystery solved: Study explains core packing fractions
https://phys.org/news/2025-03-protein-mystery-core-fractions.html
#HackerNews #proteinfolding #science #research #corepacking #fractions #mysterysolved
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A protein folding mystery solved: Study explains core packing fractions
https://phys.org/news/2025-03-protein-mystery-core-fractions.html
#HackerNews #proteinfolding #science #research #corepacking #fractions #mysterysolved
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A protein folding mystery solved: Study explains core packing fractions
https://phys.org/news/2025-03-protein-mystery-core-fractions.html
#HackerNews #proteinfolding #science #research #corepacking #fractions #mysterysolved
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A protein folding mystery solved: Study explains core packing fractions
https://phys.org/news/2025-03-protein-mystery-core-fractions.html
#HackerNews #proteinfolding #science #research #corepacking #fractions #mysterysolved
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https://youtube.com/watch?v=P_fHJIYENdI&si=ECF7pagdnAgEwT4Z
Veritasium just released a great video of #ProteinFolding algorithms and #AlphaFold as part of the story.
The Veritasium team releases some of the best science videos around: accessible, clear and accurate. It's a great service to communicate this breakthrough to everyone.
#ScientificComputing #Bioinformatics #AI #MachineLearning #ScienceCommunication #ProteinDesign
P.S. shame about the anthropomorphic hype at the end
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On this note: are you interested in #tech, #selfHosting, #science, #computationalScience, #HPC, #liberatoryTech, or just #POSIX in general but otherwise lack the resources, financial or otherwise? Get in touch with me and we can have a chat about maybe getting you some time. I can't promise when things will be ready or how much I can offer, but.
No generative AI training, please. 'Classic' ML that doesn't generate trash, contribute to surveillance, or rely on stolen data is fine though.
EDIT: please feel free to boost! DMs for initial contact are fine; while I run my server, I do not run yours so just a hello and a general area of interest are all I ask that you put in there. If you feel a project or interest is sensitive we can arrange another chat medium from there. I just wanna get a sense of who you are since I'll be, you know, letting you access the computer sitting in my office lmao.
EDIT 2: I can also specifically help to some degree if you're interested in learning about #computationalChemistry, #proteinFolding, or running a few different types of #simulations.
EDIT 3: If you're interested in writing/deploying/understanding #webDesign, #webTech, etc, that's also possible. I'm not trying to limit anything here, mostly just tagging with what things I know.
EDIT 4: jesus christ Audrey. Anyway, "a sense of who you are" does NOT have to include personally identifying information. I mean much more informal and useful stuff than that, such as what you're interested in and wanna work on. I want you to get to know me a little bit, too, because we'll both need a degree of trust and if you feel you can't trust me then please don't force yourself to.
RE: https://fire.asta.lgbt/notes/a3911f2wi43200mf -
How good would any of this AI/NPU processor crap be for protein folding? If it was supported? Folding LOVES GPUs, would it love these other designs?
Also now that I think about it, what about RT and Tensor cores on GPUs too?
Too bad f@h will never be rewritten to leverage any of it it feels like. Unless developments have been happening :>
#FoldingAtHome #ProteinFolding #DistributedComputing #DistributedCompute #BOINC #CUDA
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How good would any of this AI/NPU processor crap be for protein folding? If it was supported? Folding LOVES GPUs, would it love these other designs?
Also now that I think about it, what about RT and Tensor cores on GPUs too?
Too bad f@h will never be rewritten to leverage any of it it feels like. Unless developments have been happening :>
#FoldingAtHome #ProteinFolding #DistributedComputing #DistributedCompute #BOINC #CUDA
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How good would any of this AI/NPU processor crap be for protein folding? If it was supported? Folding LOVES GPUs, would it love these other designs?
Also now that I think about it, what about RT and Tensor cores on GPUs too?
Too bad f@h will never be rewritten to leverage any of it it feels like. Unless developments have been happening :>
#FoldingAtHome #ProteinFolding #DistributedComputing #DistributedCompute #BOINC #CUDA
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#TerrenceDeacon - #Philosophy of #Biological #Information
https://www.youtube.com/watch?v=KH5p7uFMr3c
#PhilosophyOfBiology #Biology #PhilosophyOfScience #Science #Shannon #Signal #Signals #Complexity #Encoding #DNA #Protein #Chemistry #Folding #ProteinFolding #Evolution #EvolutionaryBiology #CloserToTruth #RobertKuhn
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#TerrenceDeacon - #Philosophy of #Biological #Information
https://www.youtube.com/watch?v=KH5p7uFMr3c
#PhilosophyOfBiology #Biology #PhilosophyOfScience #Science #Shannon #Signal #Signals #Complexity #Encoding #DNA #Protein #Chemistry #Folding #ProteinFolding #Evolution #EvolutionaryBiology #CloserToTruth #RobertKuhn
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#TerrenceDeacon - #Philosophy of #Biological #Information
https://www.youtube.com/watch?v=KH5p7uFMr3c
#PhilosophyOfBiology #Biology #PhilosophyOfScience #Science #Shannon #Signal #Signals #Complexity #Encoding #DNA #Protein #Chemistry #Folding #ProteinFolding #Evolution #EvolutionaryBiology #CloserToTruth #RobertKuhn
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#TerrenceDeacon - #Philosophy of #Biological #Information
https://www.youtube.com/watch?v=KH5p7uFMr3c
#PhilosophyOfBiology #Biology #PhilosophyOfScience #Science #Shannon #Signal #Signals #Complexity #Encoding #DNA #Protein #Chemistry #Folding #ProteinFolding #Evolution #EvolutionaryBiology #CloserToTruth #RobertKuhn
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#TerrenceDeacon - #Philosophy of #Biological #Information
https://www.youtube.com/watch?v=KH5p7uFMr3c
#PhilosophyOfBiology #Biology #PhilosophyOfScience #Science #Shannon #Signal #Signals #Complexity #Encoding #DNA #Protein #Chemistry #Folding #ProteinFolding #Evolution #EvolutionaryBiology #CloserToTruth #RobertKuhn
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Nobel Prize in Chemistry 2024:
David Baker, USA, is honored for his work in computational protein design,
the other half is shared by Demis Hassabis and John M. Jumper, both UK, for their contributions to protein structure prediction
https://www.chemistryviews.org/nobel-prize-in-chemistry-2024/
#chemistry #chemistryviews #chemviews #chemiverse #nobelprize2024 #2024nobelprize #chemistrynobelprize #nobelprizeinchemistry #proteinfolding #biochemistry #ai
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Nobel Prize in Chemistry 2024:
David Baker, USA, is honored for his work in computational protein design,
the other half is shared by Demis Hassabis and John M. Jumper, both UK, for their contributions to protein structure prediction
https://www.chemistryviews.org/nobel-prize-in-chemistry-2024/
#chemistry #chemistryviews #chemviews #chemiverse #nobelprize2024 #2024nobelprize #chemistrynobelprize #nobelprizeinchemistry #proteinfolding #biochemistry #ai
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Nobel Prize in Chemistry 2024:
David Baker, USA, is honored for his work in computational protein design,
the other half is shared by Demis Hassabis and John M. Jumper, both UK, for their contributions to protein structure prediction
https://www.chemistryviews.org/nobel-prize-in-chemistry-2024/
#chemistry #chemistryviews #chemviews #chemiverse #nobelprize2024 #2024nobelprize #chemistrynobelprize #nobelprizeinchemistry #proteinfolding #biochemistry #ai
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Nobel Prize in Chemistry 2024:
David Baker, USA, is honored for his work in computational protein design,
the other half is shared by Demis Hassabis and John M. Jumper, both UK, for their contributions to protein structure prediction
https://www.chemistryviews.org/nobel-prize-in-chemistry-2024/
#chemistry #chemistryviews #chemviews #chemiverse #nobelprize2024 #2024nobelprize #chemistrynobelprize #nobelprizeinchemistry #proteinfolding #biochemistry #ai
