#open-science — Public Fediverse posts
Live and recent posts from across the Fediverse tagged #open-science, aggregated by home.social.
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🌟 Come join our team! 🌟
We're hiring a Research Data Librarian to join us in the Center for Digital Scholarship at IU Indianapolis.
🔎 Learn more about the position here: https://indiana.peopleadmin.com/postings/33822
#IUIndianapolis #libraryjob #openscience #openaccess #researchdata #OpenData
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🌟 Come join our team! 🌟
We're hiring a Research Data Librarian to join us in the Center for Digital Scholarship at IU Indianapolis.
🔎 Learn more about the position here: https://indiana.peopleadmin.com/postings/33822
#IUIndianapolis #libraryjob #openscience #openaccess #researchdata #OpenData
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Pipeline release! nf-core/pixelator v5.0.0 - nf-core/pixelator 5.0.0!
Pipeline to generate Proximity Network Assay data with Pixelator (Pixelgen Technologies AB)
Please see the changelog: https://github.com/nf-core/pixelator/releases/tag/5.0.0#molecularpixelation #pixelator #pixelgentechnologies #proteins #singlecell #singlecellomics #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/pixelator v5.0.0 - nf-core/pixelator 5.0.0!
Pipeline to generate Proximity Network Assay data with Pixelator (Pixelgen Technologies AB)
Please see the changelog: https://github.com/nf-core/pixelator/releases/tag/5.0.0#molecularpixelation #pixelator #pixelgentechnologies #proteins #singlecell #singlecellomics #nfcore #openscience #nextflow #bioinformatics
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New #Paper published in Quantum: Shadow Pauli Flow: Characterising Determinism in MBQCs involving Pauli Measurements
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New #Paper published in Quantum: Shadow Pauli Flow: Characterising Determinism in MBQCs involving Pauli Measurements
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Adding this to my To Read list. Unfortunately, even just the abstract will teach you more than most people know.
Women as the First Open Scientists: Five Stories of the Neglected Contributions of Women in (Social) Science Reform History
by Dr Madeleine Pownall
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Adding this to my To Read list. Unfortunately, even just the abstract will teach you more than most people know.
Women as the First Open Scientists: Five Stories of the Neglected Contributions of Women in (Social) Science Reform History
by Dr Madeleine Pownall
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We have greatly enjoyed organising ReproducibiliTea in the HumaniTeas but, after five semesters, we have decided it's time we took a (tea) break. This means that TODAY's session will be the last we brew (at least for a while).
Don't miss out on what promises to be a tea-riffic session with Onur Özsoy. Onur will tell us all about "How to do research with 100+ colleagues" and share his experiences of being involved in the ManyLanguages project.
For this goodbye-session TODAY Thursday 16 July 16-17:30 CEST in the Medienbibliothek of the Sprachlabor (room -1.208 in the Gartengeschoss of SSC building) to share some iced tea and cookies or online via Zoom.
@unibibkoeln
#OpenScience #ReproducibiliTea #BigTeamScience #academia -
We have greatly enjoyed organising ReproducibiliTea in the HumaniTeas but, after five semesters, we have decided it's time we took a (tea) break. This means that TODAY's session will be the last we brew (at least for a while).
Don't miss out on what promises to be a tea-riffic session with Onur Özsoy. Onur will tell us all about "How to do research with 100+ colleagues" and share his experiences of being involved in the ManyLanguages project.
For this goodbye-session TODAY Thursday 16 July 16-17:30 CEST in the Medienbibliothek of the Sprachlabor (room -1.208 in the Gartengeschoss of SSC building) to share some iced tea and cookies or online via Zoom.
@unibibkoeln
#OpenScience #ReproducibiliTea #BigTeamScience #academia -
New paper led by Lorenzo Cesario, who recently finished his MSc with us. It's already his second first-author paper from that MSc. 🌍
Read the paper: https://arxiv.org/abs/2607.13793
Close-in super-Earths are supposed to lose their atmospheres to their star's radiation and shrink for good. We find that some puff back up late in their lives instead, a temporary rebound we call reflation.
What decides it is the chemistry of the interior. 🌋 A reduced mantle first outgases a CO-rich atmosphere; as the planet evolves, water dissolved in the magma ocean below is released as hydrogen, and the atmosphere flips from carbon- to hydrogen-dominated. That late switch re-inflates the planet and can lower its bulk density by up to 60%, hundreds of millions to billions of years after it formed, before it is lost entirely. An oxidised, more Earth-like interior just deflates steadily.
Read across the whole population, a super-Earth's size may then trace the geochemistry hidden in its interior and how it formed. 🔭
The images: the sketch shows a reduced world (red) swelling before it shrinks, while an oxidised one (blue) only shrinks. The plot tracks this as a late dip in bulk density across many simulated planets; each dot is a world stripped bare.
Accepted at the Astrophysical Journal Letters.
With @timlichtenberg, Mara Attia, Harrison Nicholls, Imre Kisvárdai and Quentin Changeat.
#Exoplanets #PlanetaryScience #Astronomy #Astrodon #OpenScience
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New paper led by Lorenzo Cesario, who recently finished his MSc with us. It's already his second first-author paper from that MSc. 🌍
Read the paper: https://arxiv.org/abs/2607.13793
Close-in super-Earths are supposed to lose their atmospheres to their star's radiation and shrink for good. We find that some puff back up late in their lives instead, a temporary rebound we call reflation.
What decides it is the chemistry of the interior. 🌋 A reduced mantle first outgases a CO-rich atmosphere; as the planet evolves, water dissolved in the magma ocean below is released as hydrogen, and the atmosphere flips from carbon- to hydrogen-dominated. That late switch re-inflates the planet and can lower its bulk density by up to 60%, hundreds of millions to billions of years after it formed, before it is lost entirely. An oxidised, more Earth-like interior just deflates steadily.
Read across the whole population, a super-Earth's size may then trace the geochemistry hidden in its interior and how it formed. 🔭
The images: the sketch shows a reduced world (red) swelling before it shrinks, while an oxidised one (blue) only shrinks. The plot tracks this as a late dip in bulk density across many simulated planets; each dot is a world stripped bare.
Accepted at the Astrophysical Journal Letters.
With @timlichtenberg, Mara Attia, Harrison Nicholls, Imre Kisvárdai and Quentin Changeat.
#Exoplanets #PlanetaryScience #Astronomy #Astrodon #OpenScience
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💬 OER entstehen dort, wo Projektergebnisse weitergedacht, geteilt und für andere nutzbar gemacht werden.
Die Eindrücke aus der Bergischen Universität Wuppertal zeigen, wie selbstverständlich offene Materialien Teil von Lehre und Projektarbeit werden können – und wie wichtig verlässliche Strukturen sind, damit Ergebnisse sichtbar, auffindbar und nachhaltig nachnutzbar bleiben.
#OER #OERde #OpenEducation #FediCampus #FediLZ #CCLde #openscience #AcademiaEdu #AcademicMastodon #hochschuldidaktik
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📣 Natural Product Occurrence of the Day
🧪 7-Geranyl-oxy-6-methoxycoumarin [https://www.wikidata.org/wiki/Q104984237] is a molecule
found in a 🌿 plant, Murraya koenigii [https://www.wikidata.org/wiki/Q244731]
📚 according to: [https://www.wikidata.org/wiki/Q40456407]✏️ This occurrence is available for curation on Wikidata [https://www.wikidata.org/wiki/Q104984237#P703]. If you spot an error, feel free to improve it!
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📣 Natural Product Occurrence of the Day
🧪 7-Geranyl-oxy-6-methoxycoumarin [https://www.wikidata.org/wiki/Q104984237] is a molecule
found in a 🌿 plant, Murraya koenigii [https://www.wikidata.org/wiki/Q244731]
📚 according to: [https://www.wikidata.org/wiki/Q40456407]✏️ This occurrence is available for curation on Wikidata [https://www.wikidata.org/wiki/Q104984237#P703]. If you spot an error, feel free to improve it!
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The best of both worlds: Leveraging generalist infrastructure to support specialist metadata and reporting requirements with Dryad and CEDAR.
#opendata #datasharing #openresearch #openscience #researchintegrity #data #scholcomm #scholcomms
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Pipeline release! nf-core/sopa v1.0.0 - v1.0.0 - [2026-07-15]!
Nextflow version of Sopa - spatial omics pipeline and analysis
Please see the changelog: https://github.com/nf-core/sopa/releases/tag/1.0.0#segmentation #spatialomics #spatialproteomics #spatialtranscriptomics #spatialdata #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/sopa v1.0.0 - v1.0.0 - [2026-07-15]!
Nextflow version of Sopa - spatial omics pipeline and analysis
Please see the changelog: https://github.com/nf-core/sopa/releases/tag/1.0.0#segmentation #spatialomics #spatialproteomics #spatialtranscriptomics #spatialdata #nfcore #openscience #nextflow #bioinformatics
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Back in June we previewed 5 features in development, which will be released in the upcoming weeks. If you missed it, recording is now on YouTube ! 📥
🧩 Jobs UI
🤖 Coding Agents
🖥️ HPC Polish
🔒️ Private Image Builds
🚀 Renku Apps (beta) -
Back in June we previewed 5 features in development, which will be released in the upcoming weeks. If you missed it, recording is now on YouTube ! 📥
🧩 Jobs UI
🤖 Coding Agents
🖥️ HPC Polish
🔒️ Private Image Builds
🚀 Renku Apps (beta) -
New #Paper published in Quantum: Fast quantum measurement tomography with optimal error bounds
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New #Paper published in Quantum: Fast quantum measurement tomography with optimal error bounds
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New #Paper published in Quantum: MPC in the Quantum Head (or: Superposition-Secure (Quantum) Zero-Knowledge)
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New #Paper published in Quantum: MPC in the Quantum Head (or: Superposition-Secure (Quantum) Zero-Knowledge)
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200,000 grants are now registered in the Research Nexus through Crossref's Grant Linking System. Our colleague Rocío Gaudioso Pedraza reflects on this on our blog: https://doi.org/10.64000/wvk7x-4b139 #openscience
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200,000 grants are now registered in the Research Nexus through Crossref's Grant Linking System. Our colleague Rocío Gaudioso Pedraza reflects on this on our blog: https://doi.org/10.64000/wvk7x-4b139 #openscience
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New #Paper published in Quantum: Geometric speed limit of state preparation and curved control spaces
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New #Paper published in Quantum: Geometric speed limit of state preparation and curved control spaces
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200,000 grants are now registered in the Research Nexus through Crossref's Grant Linking System. Our colleague Rocío Gaudioso Pedraza reflects on this on our blog: https://doi.org/10.64000/wvk7x-4b139 #openscience
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New #Paper published in Quantum: From Superradiance to Superabsorption: An Exact Treatment of Non-Markovian Cooperative Radiation
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New #Paper published in Quantum: From Superradiance to Superabsorption: An Exact Treatment of Non-Markovian Cooperative Radiation
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🚀 New #Publication in #OpenAccess!
Anticipatory #AI #Governance framework for #DigitalInclusion, based on #Science4Policy #ActionResearch project within #Gipuzkoa #BasqueCountry
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🚀 New #Publication in #OpenAccess!
Anticipatory #AI #Governance framework for #DigitalInclusion, based on #Science4Policy #ActionResearch project within #Gipuzkoa #BasqueCountry
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🚀 New #Publication in #OpenAccess!
Anticipatory #AI #Governance framework for #DigitalInclusion, based on #Science4Policy #ActionResearch project within #Gipuzkoa #BasqueCountry
https://www.elspub.com/doi/10.55092/let20260008 #OpenScience
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🚀 New #Publication in #OpenAccess!
Anticipatory #AI #Governance framework for #DigitalInclusion, based on #Science4Policy #ActionResearch project within #Gipuzkoa #BasqueCountry
https://www.elspub.com/doi/10.55092/let20260008 #OpenScience
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What happened to https://www.goodreports.org ?
Imagine building a research tool, even writing a paper about it (https://pmc.ncbi.nlm.nih.gov/articles/PMC8520646/), only to have the site taken by a gambling site. Embarassing!
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What happened to https://www.goodreports.org ?
Imagine building a research tool, even writing a paper about it (https://pmc.ncbi.nlm.nih.gov/articles/PMC8520646/), only to have the site taken by a gambling site. Embarassing!
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Mehr Sichtbarkeit für Open Access in den Bundesländern: Die Länderdossiers im #OAatlas wurden von
@openaccess aktualisiert!Das ist neu:
▪️ Aktualisierte Dossiers auf PubPub (mit DOI & Kommentarfunktion): https://oabb.pubpub.org/oa-atlas
▪️ Strukturierte Datentabellen zu den Open-Access-Aktivitäten aller Bundesländer: https://open-access.network/services/oaatlas/laenderdossiersMehr dazu in unserer News: https://open-access.network/services/news/artikel/mehr-sichtbarkeit-fuer-open-access-in-den-bundeslaendern
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Mehr Sichtbarkeit für Open Access in den Bundesländern: Die Länderdossiers im #OAatlas wurden von
@openaccess aktualisiert!Das ist neu:
▪️ Aktualisierte Dossiers auf PubPub (mit DOI & Kommentarfunktion): https://oabb.pubpub.org/oa-atlas
▪️ Strukturierte Datentabellen zu den Open-Access-Aktivitäten aller Bundesländer: https://open-access.network/services/oaatlas/laenderdossiersMehr dazu in unserer News: https://open-access.network/services/news/artikel/mehr-sichtbarkeit-fuer-open-access-in-den-bundeslaendern
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New #Paper published in Quantum: Near-Optimal Parameter Tuning of Level-1 QAOA for Ising Models
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New #Paper published in Quantum: Near-Optimal Parameter Tuning of Level-1 QAOA for Ising Models
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🤖 Offen, intelligent & gemeinsam gestaltet?
Wie verändert #KI die offene Hochschullehre und welche Rolle spielen #OER dabei? In unserem Beitrag für die KNOER-Blogreihe „#OffenIntelligent“ blicken wir auf Erfahrungen aus der twillo-Praxis: auf Fragen zu Recht, Qualität, Souveränität und darauf, wie KI offene Bildungsprozesse unterstützen kann.
🔗Zum Beitrag: https://kn-oer.de/category/blogreihe-offenintelligent/
#OERde #OpenEducation #FediCampus #FediLZ #CCLde #openscience #AcademiaEdu #AcademicMastodon #hochschuldidaktik -
📣 Natural Product Occurrence of the Day
🧪 1-methoxy-9H-carbazole-3-carboxylic acid [https://www.wikidata.org/wiki/Q105299881] is a molecule
found in a 🌿 plant, Murraya koenigii [https://www.wikidata.org/wiki/Q244731]
📚 according to: 3-formylindole from Murraya exotica [https://www.wikidata.org/wiki/Q105183835]✏️ This occurrence is available for curation on Wikidata [https://www.wikidata.org/wiki/Q105299881#P703]. If you spot an error, feel free to improve it!
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📣 Natural Product Occurrence of the Day
🧪 1-methoxy-9H-carbazole-3-carboxylic acid [https://www.wikidata.org/wiki/Q105299881] is a molecule
found in a 🌿 plant, Murraya koenigii [https://www.wikidata.org/wiki/Q244731]
📚 according to: 3-formylindole from Murraya exotica [https://www.wikidata.org/wiki/Q105183835]✏️ This occurrence is available for curation on Wikidata [https://www.wikidata.org/wiki/Q105299881#P703]. If you spot an error, feel free to improve it!
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3/3 This is our ⭐️156th⭐️recommendation! We will continue to transparently peer-review your manuscripts and make them free to publish / free to read pieces of citable academic work! Try us, this is the way to go in 2026! #OpenScience #openaccess
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3/3 This is our ⭐️156th⭐️recommendation! We will continue to transparently peer-review your manuscripts and make them free to publish / free to read pieces of citable academic work! Try us, this is the way to go in 2026! #OpenScience #openaccess
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1/3 New recommendation: Eythan Levy (2026). Detecting temporal relations in archaeology: model and algorithms. V2 peer-reviewed and recommended by PCI #Archaeology https://doi.org/10.5281/zenodo.20846924 #OpenScience #openaccess
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Pipeline release! nf-core/seqinspector v1.1.0 - nf-core/seqinspector 1.1.0 - Veronica Mars!
Dedicated QC-only pipeline for sequencing data. The pipeline will run a (potentially large) set of QC tools and can output global and group specific Multiqc reports. The pipeline is targeting core facilities or research groups with larger sequencing throughput.
Please see the changelog: https://github.com/nf-core/seqinspector/releases/tag/1.1.0#genomics #qualitycontrol #nfcore #openscience #nextflow #bioinformatics
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✍️ [blog] From Peer Review to Mentorship: My rOpenSci Story by Eunseop Kim
🌟 We're kicking off our 15th anniversary story series! 🌟
In our first post, Eunseop Kim shares how a software peer review unexpectedly led to becoming an rOpenSci reviewer and later a mentor in the Champions Program. Read the story about how open, constructive review builds not only better software, but stronger communities.
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new blog post: "Carbon beats gold: Diamond Open Access is the future #1" https://doi.org/10.59350/bsnp5-68v45
"Enter the world of diamond open access, where science is published under an open license, and neither the reviewers, not the readers, nor the authors pay, all key stakeholder in the exchange of scientific knowledge." https://chem-bla-ics.linkedchemistry.info/2026/07/13/carbon-beats-gold-diamond-open-access-is-the-future.html
Replies to this post show up in the blog.
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📢 Call for Papers: The Open-Source Approach to Geospatial Applications (Geocarto International)
How open-source software, data, and standards are transforming geospatial science—advancing transparency, reproducibility, and innovation across GIS, remote sensing, and Earth observation.
🗓️ Submission deadline: 31 January 2027
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I have over 29k open-access PDF articles right next to me. Properly indexed and named. They represent 5 years of all the #MultipleSclerosis research. Imagine if the cure is hiding in this box, and I'm too stupid to know how to open it. If anyone wants a crack at it, I'm happy to share. #datamining #ai #openscience