#nanopore — Public Fediverse posts

Interesting @biorxivpreprint by the groups of Eva Bertosin and Cees Dekker.

A #DNAorigami #nanopore with adjustable pore size that mimics the nuclear pore complex and allows selective transport of proteins across lipid bilayers.

https://doi.org/10.64898/2026.09.03.749129;
#Science #DNA #Transport #Pore

Interesting @[email protected] by the groups of Eva Bertosin and @[email protected].

A #DNAorigami #nanopore with adjustable pore size that mimics the nuclear pore complex and allows selective transport of proteins across lipid bilayers.

doi.org/10.64898/202...;
#Science #DNA

Dilatable DNA origami nanopore...

Pipeline release! nf-core/bacass v2.6.0 - nf-core/bacass v2.6.0 - Crimson Titanium Seahorse!
Simple bacterial assembly and annotation pipeline
Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.6.0

#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.5.0 - nf-core/bacass v2.5.0!

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.5.0

#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Super cool paper (part of PhD thesis): I thought assembling the genome from raw signal isn't practical, but it seems not possible, but yielding results comparable/better to usual approaches: basecalling followed by de novo genome assembly!
#nanopore #GenomeAssembly
https://arxiv.org/pdf/2410.17801
https://arxiv.org/html/2503.02997v1#Ch7

Pipeline release! nf-core/bacass v2.4.0 - v2.4.0!

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.4.0

#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics