#nanopore — Public Fediverse posts
Live and recent posts from across the Fediverse tagged #nanopore, aggregated by home.social.
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Pipeline release! nf-core/bacass v2.6.0 - nf-core/bacass v2.6.0 - Crimson Titanium Seahorse!
Simple bacterial assembly and annotation pipeline
Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.6.0#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/bacass v2.6.0 - nf-core/bacass v2.6.0 - Crimson Titanium Seahorse!
Simple bacterial assembly and annotation pipeline
Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.6.0#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/bacass v2.6.0 - nf-core/bacass v2.6.0 - Crimson Titanium Seahorse!
Simple bacterial assembly and annotation pipeline
Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.6.0#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/bacass v2.6.0 - nf-core/bacass v2.6.0 - Crimson Titanium Seahorse!
Simple bacterial assembly and annotation pipeline
Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.6.0#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/bacass v2.6.0 - nf-core/bacass v2.6.0 - Crimson Titanium Seahorse!
Simple bacterial assembly and annotation pipeline
Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.6.0#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics
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Our latest research article is a proof of concept protocol for combining #Nanopore sequencing with the #Twist Comprehensive Viral Research Panel. A great tool allowing us to study the #virome of clinical patient samples with a targeted #metagenomics approach.
#Research
#Science
#Biology
#Microbiology
#ClinicalDiagnosticshttps://www.sciencedirect.com/science/article/pii/S0042682226000048
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Pipeline release! nf-core/bacass v2.5.0 - nf-core/bacass v2.5.0!
Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.5.0
#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/bacass v2.5.0 - nf-core/bacass v2.5.0!
Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.5.0
#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/bacass v2.5.0 - nf-core/bacass v2.5.0!
Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.5.0
#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/bacass v2.5.0 - nf-core/bacass v2.5.0!
Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.5.0
#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/bacass v2.5.0 - nf-core/bacass v2.5.0!
Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.5.0
#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics
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Super cool paper (part of PhD thesis): I thought assembling the genome from raw signal isn't practical, but it seems not possible, but yielding results comparable/better to usual approaches: basecalling followed by de novo genome assembly!
#nanopore #GenomeAssembly
https://arxiv.org/pdf/2410.17801
https://arxiv.org/html/2503.02997v1#Ch7 -
Super cool paper (part of PhD thesis): I thought assembling the genome from raw signal isn't practical, but it seems not possible, but yielding results comparable/better to usual approaches: basecalling followed by de novo genome assembly!
#nanopore #GenomeAssembly
https://arxiv.org/pdf/2410.17801
https://arxiv.org/html/2503.02997v1#Ch7 -
Super cool paper (part of PhD thesis): I thought assembling the genome from raw signal isn't practical, but it seems not possible, but yielding results comparable/better to usual approaches: basecalling followed by de novo genome assembly!
#nanopore #GenomeAssembly
https://arxiv.org/pdf/2410.17801
https://arxiv.org/html/2503.02997v1#Ch7 -
Super cool paper (part of PhD thesis): I thought assembling the genome from raw signal isn't practical, but it seems not possible, but yielding results comparable/better to usual approaches: basecalling followed by de novo genome assembly!
#nanopore #GenomeAssembly
https://arxiv.org/pdf/2410.17801
https://arxiv.org/html/2503.02997v1#Ch7 -
Super cool paper (part of PhD thesis): I thought assembling the genome from raw signal isn't practical, but it seems not possible, but yielding results comparable/better to usual approaches: basecalling followed by de novo genome assembly!
#nanopore #GenomeAssembly
https://arxiv.org/pdf/2410.17801
https://arxiv.org/html/2503.02997v1#Ch7 -
Pipeline release! nf-core/bacass v2.4.0 - v2.4.0!
Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.4.0
#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/bacass v2.4.0 - v2.4.0!
Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.4.0
#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/bacass v2.4.0 - v2.4.0!
Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.4.0
#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/bacass v2.4.0 - v2.4.0!
Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.4.0
#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics
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Pipeline release! nf-core/bacass v2.4.0 - v2.4.0!
Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.4.0
#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics