#pathogen — Public Fediverse posts

Aquatic Disease And Pathogen Repository (Aquadepth) To Track, Evaluate, And Ultimately Predict Aquatic Disease Outbreaks Across The Nation [inc. spatial, USA]
--
https://www.usgs.gov/centers/western-fisheries-research-center/news/aquadepth-merging-aquatic-disease-surveillance-data <-- shared technical article
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#fedscience #publicgood #foodsecurity #health #fish #fisheries #coral #sampling #mitigation #animalhealth #naturalresources #ecosystems #environment #habitat #aquaculture #economics #planning #impacts #humanimpacts #AquaDePTH #aquatic #disease #pathogen #database #spatial #GIS #mapping #spatialanalysis #spatiotemporal #surveillance #monitoring #USA #opendata #biogeographic #nationwide
@USGS

Aquatic Disease And Pathogen Repository (Aquadepth) To Track, Evaluate, And Ultimately Predict Aquatic Disease Outbreaks Across The Nation [inc. spatial, USA]
--
https://www.usgs.gov/centers/western-fisheries-research-center/news/aquadepth-merging-aquatic-disease-surveillance-data <-- shared technical article
--
#fedscience #publicgood #foodsecurity #health #fish #fisheries #coral #sampling #mitigation #animalhealth #naturalresources #ecosystems #environment #habitat #aquaculture #economics #planning #impacts #humanimpacts #AquaDePTH #aquatic #disease #pathogen #database #spatial #GIS #mapping #spatialanalysis #spatiotemporal #surveillance #monitoring #USA #opendata #biogeographic #nationwide
@USGS

Aquatic Disease And Pathogen Repository (Aquadepth) To Track, Evaluate, And Ultimately Predict Aquatic Disease Outbreaks Across The Nation [inc. spatial, USA]
--
https://www.usgs.gov/centers/western-fisheries-research-center/news/aquadepth-merging-aquatic-disease-surveillance-data <-- shared technical article
--
#fedscience #publicgood #foodsecurity #health #fish #fisheries #coral #sampling #mitigation #animalhealth #naturalresources #ecosystems #environment #habitat #aquaculture #economics #planning #impacts #humanimpacts #AquaDePTH #aquatic #disease #pathogen #database #spatial #GIS #mapping #spatialanalysis #spatiotemporal #surveillance #monitoring #USA #opendata #biogeographic #nationwide
@USGS

Aquatic Disease And Pathogen Repository (Aquadepth) To Track, Evaluate, And Ultimately Predict Aquatic Disease Outbreaks Across The Nation [inc. spatial, USA]
--
https://www.usgs.gov/centers/western-fisheries-research-center/news/aquadepth-merging-aquatic-disease-surveillance-data <-- shared technical article
--
#fedscience #publicgood #foodsecurity #health #fish #fisheries #coral #sampling #mitigation #animalhealth #naturalresources #ecosystems #environment #habitat #aquaculture #economics #planning #impacts #humanimpacts #AquaDePTH #aquatic #disease #pathogen #database #spatial #GIS #mapping #spatialanalysis #spatiotemporal #surveillance #monitoring #USA #opendata #biogeographic #nationwide
@USGS

Aquatic Disease And Pathogen Repository (Aquadepth) To Track, Evaluate, And Ultimately Predict Aquatic Disease Outbreaks Across The Nation [inc. spatial, USA]
--
https://www.usgs.gov/centers/western-fisheries-research-center/news/aquadepth-merging-aquatic-disease-surveillance-data <-- shared technical article
--
#fedscience #publicgood #foodsecurity #health #fish #fisheries #coral #sampling #mitigation #animalhealth #naturalresources #ecosystems #environment #habitat #aquaculture #economics #planning #impacts #humanimpacts #AquaDePTH #aquatic #disease #pathogen #database #spatial #GIS #mapping #spatialanalysis #spatiotemporal #surveillance #monitoring #USA #opendata #biogeographic #nationwide
@USGS

Pipeline release! nf-core/taxprofiler v2.0.0 - v2.0.0 - Crazy Corgi!
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
Please see the changelog: https://github.com/nf-core/taxprofiler/releases/tag/2.0.0

#classification #illumina #longreads #metagenomics #microbiome #nanopore #pathogen #profiling #shotgun #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/taxprofiler v2.0.0 - v2.0.0 - Crazy Corgi!
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
Please see the changelog: https://github.com/nf-core/taxprofiler/releases/tag/2.0.0

#classification #illumina #longreads #metagenomics #microbiome #nanopore #pathogen #profiling #shotgun #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/taxprofiler v2.0.0 - v2.0.0 - Crazy Corgi!
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
Please see the changelog: https://github.com/nf-core/taxprofiler/releases/tag/2.0.0

#classification #illumina #longreads #metagenomics #microbiome #nanopore #pathogen #profiling #shotgun #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/taxprofiler v2.0.0 - v2.0.0 - Crazy Corgi!
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
Please see the changelog: https://github.com/nf-core/taxprofiler/releases/tag/2.0.0

#classification #illumina #longreads #metagenomics #microbiome #nanopore #pathogen #profiling #shotgun #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/taxprofiler v2.0.0 - v2.0.0 - Crazy Corgi!
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
Please see the changelog: https://github.com/nf-core/taxprofiler/releases/tag/2.0.0

#classification #illumina #longreads #metagenomics #microbiome #nanopore #pathogen #profiling #shotgun #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

Wu et al. discuss recent work on systemic stomatal immunity (SSIM), a fast-acting, targeted #plant #defense mechanism in which #pathogen challenge triggers distal stomatal closure within hours.

https://doi.org/10.1111/jipb.70245
@WileyLifeSci
#PlantSci #JIPB #Arabidopsis #PlantPathology #botany

Wu et al. discuss recent work on systemic stomatal immunity (SSIM), a fast-acting, targeted #plant #defense mechanism in which #pathogen challenge triggers distal stomatal closure within hours.

https://doi.org/10.1111/jipb.70245
@WileyLifeSci
#PlantSci #JIPB #Arabidopsis #PlantPathology #botany

New slogan I need on every billboard, podcast ad, cereal box, news ticker, etc:
> "Symptom management" is lifesaving for disabled people. You do not understand.

#spoonie #disability #MassDisablingEvent #tired #sick #illness #unwell #disease #infectious #pathogen #virus #bacteria #fungus #protozoa #protist #hyphae #yeast #microbiome #microbiota #microorganisms #YouAreAColony #YouAreACity

New slogan I need on every billboard, podcast ad, cereal box, news ticker, etc:
> "Symptom management" is lifesaving for disabled people. You do not understand.

#spoonie #disability #MassDisablingEvent #tired #sick #illness #unwell #disease #infectious #pathogen #virus #bacteria #fungus #protozoa #protist #hyphae #yeast #microbiome #microbiota #microorganisms #YouAreAColony #YouAreACity

New slogan I need on every billboard, podcast ad, cereal box, news ticker, etc:
> "Symptom management" is lifesaving for disabled people. You do not understand.

#spoonie #disability #MassDisablingEvent #tired #sick #illness #unwell #disease #infectious #pathogen #virus #bacteria #fungus #protozoa #protist #hyphae #yeast #microbiome #microbiota #microorganisms #YouAreAColony #YouAreACity

New slogan I need on every billboard, podcast ad, cereal box, news ticker, etc:
> "Symptom management" is lifesaving for disabled people. You do not understand.

#spoonie #disability #MassDisablingEvent #tired #sick #illness #unwell #disease #infectious #pathogen #virus #bacteria #fungus #protozoa #protist #hyphae #yeast #microbiome #microbiota #microorganisms #YouAreAColony #YouAreACity

https://www.europesays.com/ie/364995/ New method isolates true transcription factor targets in tuberculosis bacteria #bacteria #Cell #DNA #Drugs #Éire #Enzyme #Gene #GeneExpression #Genes #Genomic #genomics #IE #Ireland #Laboratory #LivingCells #Pathogen #Polymerase #Protein #RNA #Science #Therapeutics #Transcription #TranscriptionFactors #tuberculosis

https://www.europesays.com/ie/342125/ Fred Hutch scientists reach crucial milestone in blocking Epstein Barr virus #Antibodies #Antibody #Bone #BoneMarrow #cancer #Cell #children #Chronic #Éire #Genes #Health #IE #Immunosuppression #Ireland #medicine #NeurodegenerativeDiseases #Pathogen #Research #therapy #Transplant #Vaccine #virus

Pipeline release! nf-core/taxprofiler v1.2.6 - v1.2.6 - Bouncy Basenji Patch!
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
Please see the changelog: https://github.com/nf-core/taxprofiler/releases/tag/1.2.6

#classification #illumina #longreads #metagenomics #microbiome #nanopore #pathogen #profiling #shotgun #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/taxprofiler v1.2.6 - v1.2.6 - Bouncy Basenji Patch!
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
Please see the changelog: https://github.com/nf-core/taxprofiler/releases/tag/1.2.6

#classification #illumina #longreads #metagenomics #microbiome #nanopore #pathogen #profiling #shotgun #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/taxprofiler v1.2.6 - v1.2.6 - Bouncy Basenji Patch!
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
Please see the changelog: https://github.com/nf-core/taxprofiler/releases/tag/1.2.6

#classification #illumina #longreads #metagenomics #microbiome #nanopore #pathogen #profiling #shotgun #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/taxprofiler v1.2.6 - v1.2.6 - Bouncy Basenji Patch!
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
Please see the changelog: https://github.com/nf-core/taxprofiler/releases/tag/1.2.6

#classification #illumina #longreads #metagenomics #microbiome #nanopore #pathogen #profiling #shotgun #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/taxprofiler v1.2.6 - v1.2.6 - Bouncy Basenji Patch!
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
Please see the changelog: https://github.com/nf-core/taxprofiler/releases/tag/1.2.6

#classification #illumina #longreads #metagenomics #microbiome #nanopore #pathogen #profiling #shotgun #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

A debilitating #hoof disease affecting #elk herds across the Pacific Northwest appears to be driven not by a single #pathogen but by multiple #bacterial species working together
#Veterinary #Microbiology #VeterinaryMicrobiology #WildlifeEpidemiology #sflorg
https://www.sflorg.com/2026/02/vet02022601.html

A debilitating #hoof disease affecting #elk herds across the Pacific Northwest appears to be driven not by a single #pathogen but by multiple #bacterial species working together
#Veterinary #Microbiology #VeterinaryMicrobiology #WildlifeEpidemiology #sflorg
https://www.sflorg.com/2026/02/vet02022601.html

A debilitating #hoof disease affecting #elk herds across the Pacific Northwest appears to be driven not by a single #pathogen but by multiple #bacterial species working together
#Veterinary #Microbiology #VeterinaryMicrobiology #WildlifeEpidemiology #sflorg
https://www.sflorg.com/2026/02/vet02022601.html

A debilitating #hoof disease affecting #elk herds across the Pacific Northwest appears to be driven not by a single #pathogen but by multiple #bacterial species working together
#Veterinary #Microbiology #VeterinaryMicrobiology #WildlifeEpidemiology #sflorg
https://www.sflorg.com/2026/02/vet02022601.html

A debilitating #hoof disease affecting #elk herds across the Pacific Northwest appears to be driven not by a single #pathogen but by multiple #bacterial species working together
#Veterinary #Microbiology #VeterinaryMicrobiology #WildlifeEpidemiology #sflorg
https://www.sflorg.com/2026/02/vet02022601.html

#Escherichia coli found in #diabetic foot infections is not a uniform #pathogen but constitutes a highly diverse array of genetic groups, with distinct lineages independently adapting to the diabetic wound environment.
#Microbiology #Biomedical #sflorg
https://www.sflorg.com/2026/01/bmed01132602.html

#Parvovirus B19 remains an underestimated #pathogen among #infections during #gestation in #Argentina: insights through the study of symptomatic and asymptomatic pregnant patients and newborns from Córdoba

Source: Journal of Clinical Virology, AbstractBackgroundParvovirus B19 (B19V) infection during pregnancy can cause adverse fetal outcomes. Our aim was to characterize both clinical and asymptomatic maternal and neonatal cases by studying virological and serological…

https://etidioh.wordpress.com/2024/10/16/parvovirus-b19-remains-an-underestimated-pathogen-among-infections-during-gestation-in-argentina-insights-through-the-study-of-symptomatic-and-asymptomatic-pregnant-patients-and-newborns-from-co/

“Is vaccine-induced immunity better than immunity from infection?

Vaccine-induced immunity is better because it’s safer. When you get infected with COVID, symptoms from the infection wreak havoc on your body. Whether or not you’ve been infected or vaccinated previously, the COVID booster is going to strengthen your immune responses to high levels and do so in a safe way.

Can I still get COVID if I’m vaccinated?

People who are vaccinated can still get COVID, but it is much more likely they will experience mild symptoms. Vaccinated people are much less likely to experience severe illness or get so sick that they need to be hospitalized. Data continue to show that those who are hospitalized with COVID are largely people who have not received a COVID vaccine within the past 12 months.

Particularly for people at higher risk of severe COVID, vaccination is an essential tool for reducing COVID complications, hospitalization, and death.

Can you get the flu shot and the COVID vaccine at the same time?

Yes! In fact, studies have shown that people who decide to spread out their vaccines into separate appointments often don’t follow through with getting both. We’ve also seen that the immune response generated by each vaccine does not change based on whether they are administered at the same time or separately.

It’s important to remember that many of the same populations at high risk of experiencing severe illness from COVID are also at high risk of severe influenza. Especially for these vulnerable populations, it’s a good idea to time your vaccines together.”

https://publichealth.jhu.edu/2024/what-to-know-about-updated-covid-vaccines-for-2024-25

#influenza #flu #justAflu #virus #viral #pathogen #updated #fluJab #NEW #newJab #SARScov2 #covid19 #COVID_19 #covid #CovidIsNotOver #coronaIstNichtVorbei #coronavirus #herdImmunity #helpOthers #RandomActsOfKindness #selfcare #carers #ally #allies #Disabled

🦠Pathogen... meet resistance!⚔️
A pair of nuclear factor Y transcription factors positively regulate jasmonate signaling and disease resistance in #Arabidopsis.
https://doi.org/10.1111/jipb.13732
@wileyplantsci
#PlantSci #jasmonate #phytopathology #pathogen #CropSci #plant #disease #botany

#Genomic analysis sheds light on how #seagrasses conquered the sea
https://phys.org/news/2024-01-genomic-analysis-seagrasses-conquered-sea.html

#Seagrass #genomes reveal ancient #polyploidy and adaptations to the marine environment https://www.nature.com/articles/s41477-023-01608-5

"Seagrasses evolved from their #freshwater ancestors only 3x. To do this required specialized ecological tolerance to high #salinity, lower light, a wide range of temperature tolerances, #underwater carbon capture, different #pathogen defense, structural flexibility and underwater #pollination"

"Here, we show that #Staphylococcus aureus, a bacterial #pathogen associated with itchy skin diseases, directly activates pruriceptor sensory #neurons to drive itch. Epicutaneous S. aureus exposure causes robust itch and scratch-induced damage. By testing multiple isogenic bacterial mutants for virulence factors, we identify the S. aureus serine #protease V8 as a critical mediator in evoking spontaneous #itch and #alloknesis."

https://www.cell.com/cell/fulltext/S0092-8674(23)01164-9?_returnURL=https%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS0092867423011649%3Fshowall%3Dtrue

Human #skin is home to millions of #microbes. One of these microbes, #Staphylococcus aureus, is an opportunistic #pathogen that can invade patches of skin affected by #eczema, also known as atopic #dermatitis.
#Microbiology #sflorg
https://www.sflorg.com/2023/04/mcb04122302.html

#introduction😀

I study #immune #evolution, including host - #pathogen interactions. My work has focused on #antimicrobial #defense #peptides which are like #antibiotics coded by the #genome . A key focus is #immunity-#microbiome interactions 🦠

New PP: https://doi.org/10.1101/2022.12.23.521774

I also talk ethical publishing and advancing the conversation on #preprint, #openscience, and #academicchatter.

See:
http://bit.ly/WhatPredPub
http://bit.ly/1yrPredPub

Swiss #SNSF mobility fellow in #UoE UK. Cheers! 👋

#introduction😀

I study #immune #evolution, including host - #pathogen interactions. My work has focused on #antimicrobial #defense #peptides which are like #antibiotics coded by the #genome . A key focus is #immunity-#microbiome interactions 🦠

New PP: https://doi.org/10.1101/2022.12.23.521774

I also talk ethical publishing and advancing the conversation on #preprint, #openscience, and #academicchatter.

See:
http://bit.ly/WhatPredPub
http://bit.ly/1yrPredPub

Swiss #SNSF mobility fellow in #UoE UK. Cheers! 👋

#introduction😀

I study #immune #evolution, including host - #pathogen interactions. My work has focused on #antimicrobial #defense #peptides which are like #antibiotics coded by the #genome . A key focus is #immunity-#microbiome interactions 🦠

New PP: https://doi.org/10.1101/2022.12.23.521774

I also talk ethical publishing and advancing the conversation on #preprint, #openscience, and #academicchatter.

See:
http://bit.ly/WhatPredPub
http://bit.ly/1yrPredPub

Swiss #SNSF mobility fellow in #UoE UK. Cheers! 👋

#introduction😀

I study #immune #evolution, including host - #pathogen interactions. My work has focused on #antimicrobial #defense #peptides which are like #antibiotics coded by the #genome . A key focus is #immunity-#microbiome interactions 🦠

New PP: https://doi.org/10.1101/2022.12.23.521774

I also talk ethical publishing and advancing the conversation on #preprint, #openscience, and #academicchatter.

See:
http://bit.ly/WhatPredPub
http://bit.ly/1yrPredPub

Swiss #SNSF mobility fellow in #UoE UK. Cheers! 👋

#introduction😀

I study #immune #evolution, including host - #pathogen interactions. My work has focused on #antimicrobial #defense #peptides which are like #antibiotics coded by the #genome . A key focus is #immunity-#microbiome interactions 🦠

New PP: https://doi.org/10.1101/2022.12.23.521774

I also talk ethical publishing and advancing the conversation on #preprint, #openscience, and #academicchatter.

See:
http://bit.ly/WhatPredPub
http://bit.ly/1yrPredPub

Swiss #SNSF mobility fellow in #UoE UK. Cheers! 👋

"Our findings underscore the importance of cell death in defense against intracellular bacterial pathogens and provide an example of how layered and hierarchical immune pathways can provide robust defense against pathogens that have evolved a broad arsenal of virulence factors."

#Shigella #HostPathogen #CellDeath #Apoptosis #InnateImmunity #Pathogen #Microbiology #Immunology

https://elifesciences.org/articles/83639

A bit slow on writing an #introduction ... I work on #host-pathogen #evolution and #ecology with a focus on #pathogen #HostShifts and how and why #species vary in their #susceptibility to pathogens. We typically use ~50 #species of #Drosophila and their #viruses to ask these questions but are expanding our work into other tractable systems (more soon!) to address these questions.

Hi all! Just started and trying to figure out what server is best for me 🙂

I study #immunity #genes and #immune #evolution, including host - #pathogen interactions. My work has focused on #antimicrobial #defense #peptides which are #antibiotics coded by the #genome . A key focus in #microbiome 🦠 , and #inflammation & #NFkB in #aging and #senescence .

Focus on #Drosophila but work in other #species whenever possible to improve evolutionary context.

Swiss #SNSF mobility fellow in #UoE UK.

Hi all! Just started and trying to figure out what server is best for me 🙂

I study #immunity #genes and #immune #evolution, including host - #pathogen interactions. My work has focused on #antimicrobial #defense #peptides which are #antibiotics coded by the #genome . A key focus in #microbiome 🦠 , and #inflammation & #NFkB in #aging and #senescence .

Focus on #Drosophila but work in other #species whenever possible to improve evolutionary context.

Swiss #SNSF mobility fellow in #UoE UK.

Hi all! Just started and trying to figure out what server is best for me 🙂

I study #immunity #genes and #immune #evolution, including host - #pathogen interactions. My work has focused on #antimicrobial #defense #peptides which are #antibiotics coded by the #genome . A key focus in #microbiome 🦠 , and #inflammation & #NFkB in #aging and #senescence .

Focus on #Drosophila but work in other #species whenever possible to improve evolutionary context.

Swiss #SNSF mobility fellow in #UoE UK.

Hi all! Just started and trying to figure out what server is best for me 🙂

I study #immunity #genes and #immune #evolution, including host - #pathogen interactions. My work has focused on #antimicrobial #defense #peptides which are #antibiotics coded by the #genome . A key focus in #microbiome 🦠 , and #inflammation & #NFkB in #aging and #senescence .

Focus on #Drosophila but work in other #species whenever possible to improve evolutionary context.

Swiss #SNSF mobility fellow in #UoE UK.

Hi all! Just started and trying to figure out what server is best for me 🙂

I study #immunity #genes and #immune #evolution, including host - #pathogen interactions. My work has focused on #antimicrobial #defense #peptides which are #antibiotics coded by the #genome . A key focus in #microbiome 🦠 , and #inflammation & #NFkB in #aging and #senescence .

Focus on #Drosophila but work in other #species whenever possible to improve evolutionary context.

Swiss #SNSF mobility fellow in #UoE UK.

Didn't spam # properly, but now realize how useful that is in 🐘 #introduction :

I study #immunity #genes and #immune #evolution, including host - #pathogen interactions. My work has focused on #antimicrobial #defense #peptides which are #antibiotics coded by the #genome . A key focus in #microbiome 🦠 , and #inflammation involved in #NFkB signalling.

Work with #Drosophila incl other #species when possible to improve #evolutionarybiology context.

Swiss #SNSF mobility fellow in #UoE UK.

Didn't spam # properly, but now realize how useful that is in 🐘 #introduction :

I study #immunity #genes and #immune #evolution, including host - #pathogen interactions. My work has focused on #antimicrobial #defense #peptides which are #antibiotics coded by the #genome . A key focus in #microbiome 🦠 , and #inflammation involved in #NFkB signalling.

Work with #Drosophila incl other #species when possible to improve #evolutionarybiology context.

Swiss #SNSF mobility fellow in #UoE UK.

Didn't spam # properly, but now realize how useful that is in 🐘 #introduction :

I study #immunity #genes and #immune #evolution, including host - #pathogen interactions. My work has focused on #antimicrobial #defense #peptides which are #antibiotics coded by the #genome . A key focus in #microbiome 🦠 , and #inflammation involved in #NFkB signalling.

Work with #Drosophila incl other #species when possible to improve #evolutionarybiology context.

Swiss #SNSF mobility fellow in #UoE UK.