#denovo — Public Fediverse posts

Pipeline release! nf-core/bacass v2.6.0 - nf-core/bacass v2.6.0 - Crimson Titanium Seahorse!
Simple bacterial assembly and annotation pipeline
Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.6.0

#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.6.0 - nf-core/bacass v2.6.0 - Crimson Titanium Seahorse!
Simple bacterial assembly and annotation pipeline
Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.6.0

#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.6.0 - nf-core/bacass v2.6.0 - Crimson Titanium Seahorse!
Simple bacterial assembly and annotation pipeline
Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.6.0

#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.6.0 - nf-core/bacass v2.6.0 - Crimson Titanium Seahorse!
Simple bacterial assembly and annotation pipeline
Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.6.0

#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

We are happy to release our new Special Section on de novo Gene evolution!

Special Section: de novo Gene
🔗 https://academic.oup.com/gbe/pages/special-section-de-novo-gene

Edited by Li Zhao, Claudio Casola, Victor Luria, and Nikolaos Vakirlis, the collection aggregates eight contributions that address how new genes emerge from noncoding sequences, persist through evolutionary time, and integrate into functional cellular networks.

#genome #evolution #denovo

We are happy to release our new Special Section on de novo Gene evolution!

Special Section: de novo Gene
🔗 https://academic.oup.com/gbe/pages/special-section-de-novo-gene

Edited by Li Zhao, Claudio Casola, Victor Luria, and Nikolaos Vakirlis, the collection aggregates eight contributions that address how new genes emerge from noncoding sequences, persist through evolutionary time, and integrate into functional cellular networks.

#genome #evolution #denovo

We are happy to release our new Special Section on de novo Gene evolution!

Special Section: de novo Gene
🔗 https://academic.oup.com/gbe/pages/special-section-de-novo-gene

Edited by Li Zhao, Claudio Casola, Victor Luria, and Nikolaos Vakirlis, the collection aggregates eight contributions that address how new genes emerge from noncoding sequences, persist through evolutionary time, and integrate into functional cellular networks.

#genome #evolution #denovo

We are happy to release our new Special Section on de novo Gene evolution!

Special Section: de novo Gene
🔗 https://academic.oup.com/gbe/pages/special-section-de-novo-gene

Edited by Li Zhao, Claudio Casola, Victor Luria, and Nikolaos Vakirlis, the collection aggregates eight contributions that address how new genes emerge from noncoding sequences, persist through evolutionary time, and integrate into functional cellular networks.

#genome #evolution #denovo

Pipeline release! nf-core/bacass v2.5.0 - nf-core/bacass v2.5.0!

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.5.0

#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.5.0 - nf-core/bacass v2.5.0!

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.5.0

#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.5.0 - nf-core/bacass v2.5.0!

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.5.0

#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.5.0 - nf-core/bacass v2.5.0!

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.5.0

#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

DATE: August 20, 2025 at 07:00PM
SOURCE: BioWorld MedTech

Direct article link at end of text block below.

.@FDADeviceInfo posts another batch of regulations for #denovo devices

https://t.co/9Py4wAZZn0

#medtech

Here are any URLs found in the article text:

https://t.co/9Py4wAZZn0

#medtech

Articles can be found by scrolling down the page at https://www.bioworld.com/topics/85-bioworld-medtech .

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DATE: August 20, 2025 at 07:00PM
SOURCE: BioWorld MedTech

Direct article link at end of text block below.

.@FDADeviceInfo posts another batch of regulations for #denovo devices

https://t.co/9Py4wAZZn0

#medtech

Here are any URLs found in the article text:

https://t.co/9Py4wAZZn0

#medtech

Articles can be found by scrolling down the page at https://www.bioworld.com/topics/85-bioworld-medtech .

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DATE: August 20, 2025 at 07:00PM
SOURCE: BioWorld MedTech

Direct article link at end of text block below.

.@FDADeviceInfo posts another batch of regulations for #denovo devices

https://t.co/9Py4wAZZn0

#medtech

Here are any URLs found in the article text:

https://t.co/9Py4wAZZn0

#medtech

Articles can be found by scrolling down the page at https://www.bioworld.com/topics/85-bioworld-medtech .

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1) me looking at the "manta" manual: "A post-processing script can be applied to the multi-sample vcf and detects SVs that have inheritance conflicts among a trio sample set." https://github.com/Illumina/manta/blob/master/docs/userGuide/README.md#de-novo-calling Cool !

2) and me looking a the script: that is 'just' a basic denovo detector only using the FORMAT/GT field and no other metrics... 🤨

https://github.com/Illumina/manta/blob/master/src/python/libexec/denovo_scoring.py#L27

#manta #sv #denovo

1) me looking at the "manta" manual: "A post-processing script can be applied to the multi-sample vcf and detects SVs that have inheritance conflicts among a trio sample set." https://github.com/Illumina/manta/blob/master/docs/userGuide/README.md#de-novo-calling Cool !

2) and me looking a the script: that is 'just' a basic denovo detector only using the FORMAT/GT field and no other metrics... 🤨

https://github.com/Illumina/manta/blob/master/src/python/libexec/denovo_scoring.py#L27

#manta #sv #denovo

1) me looking at the "manta" manual: "A post-processing script can be applied to the multi-sample vcf and detects SVs that have inheritance conflicts among a trio sample set." https://github.com/Illumina/manta/blob/master/docs/userGuide/README.md#de-novo-calling Cool !

2) and me looking a the script: that is 'just' a basic denovo detector only using the FORMAT/GT field and no other metrics... 🤨

https://github.com/Illumina/manta/blob/master/src/python/libexec/denovo_scoring.py#L27

#manta #sv #denovo

1) me looking at the "manta" manual: "A post-processing script can be applied to the multi-sample vcf and detects SVs that have inheritance conflicts among a trio sample set." https://github.com/Illumina/manta/blob/master/docs/userGuide/README.md#de-novo-calling Cool !

2) and me looking a the script: that is 'just' a basic denovo detector only using the FORMAT/GT field and no other metrics... 🤨

https://github.com/Illumina/manta/blob/master/src/python/libexec/denovo_scoring.py#L27

#manta #sv #denovo

DATE: June 18, 2025 at 06:30AM
SOURCE: BioWorld MedTech

Direct article link at end of text block below.

.@US_FDA releases another batch of regs for #denovo decisions

https://t.co/V6v7GqEcKd

#medtech

Here are any URLs found in the article text:

https://t.co/V6v7GqEcKd

#medtech

Articles can be found by scrolling down the page at https://www.bioworld.com/topics/85-bioworld-medtech .

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It's primitive... but it works... mostly...
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#healthcare #healthtech #healthcaretech #healthtechnology #medgadget #medicine #doctor #hospital #medtech

DATE: June 18, 2025 at 06:30AM
SOURCE: BioWorld MedTech

Direct article link at end of text block below.

.@US_FDA releases another batch of regs for #denovo decisions

https://t.co/V6v7GqEcKd

#medtech

Here are any URLs found in the article text:

https://t.co/V6v7GqEcKd

#medtech

Articles can be found by scrolling down the page at https://www.bioworld.com/topics/85-bioworld-medtech .

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#healthcare #healthtech #healthcaretech #healthtechnology #medgadget #medicine #doctor #hospital #medtech

DATE: June 18, 2025 at 06:30AM
SOURCE: BioWorld MedTech

Direct article link at end of text block below.

.@US_FDA releases another batch of regs for #denovo decisions

https://t.co/V6v7GqEcKd

#medtech

Here are any URLs found in the article text:

https://t.co/V6v7GqEcKd

#medtech

Articles can be found by scrolling down the page at https://www.bioworld.com/topics/85-bioworld-medtech .

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#healthcare #healthtech #healthcaretech #healthtechnology #medgadget #medicine #doctor #hospital #medtech

DATE: June 17, 2025 at 04:30PM
SOURCE: BioWorld MedTech

Direct article link at end of text block below.

.@US_FDA releases another batch of regs for #denovo decisions

https://t.co/V6v7GqDEUF

#medtech

Here are any URLs found in the article text:

https://t.co/V6v7GqDEUF

#medtech

Articles can be found by scrolling down the page at https://www.bioworld.com/topics/85-bioworld-medtech .

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DATE: June 17, 2025 at 04:30PM
SOURCE: BioWorld MedTech

Direct article link at end of text block below.

.@US_FDA releases another batch of regs for #denovo decisions

https://t.co/V6v7GqDEUF

#medtech

Here are any URLs found in the article text:

https://t.co/V6v7GqDEUF

#medtech

Articles can be found by scrolling down the page at https://www.bioworld.com/topics/85-bioworld-medtech .

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DATE: June 17, 2025 at 04:30PM
SOURCE: BioWorld MedTech

Direct article link at end of text block below.

.@US_FDA releases another batch of regs for #denovo decisions

https://t.co/V6v7GqDEUF

#medtech

Here are any URLs found in the article text:

https://t.co/V6v7GqDEUF

#medtech

Articles can be found by scrolling down the page at https://www.bioworld.com/topics/85-bioworld-medtech .

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#healthcare #healthtech #healthcaretech #healthtechnology #medgadget #medicine #doctor #hospital #medtech

DATE: May 09, 2025 at 06:30AM
SOURCE: BioWorld MedTech

Direct article link at end of text block below.

.@FDADeviceInfo posts regulation for 2018 test for hematological malignancies

https://t.co/jq88wT5asJ

#medtech #denovo

Here are any URLs found in the article text:

https://t.co/jq88wT5asJ

#medtech

Articles can be found by scrolling down the page at https://www.bioworld.com/topics/85-bioworld-medtech .

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DATE: May 09, 2025 at 06:30AM
SOURCE: BioWorld MedTech

Direct article link at end of text block below.

.@FDADeviceInfo posts regulation for 2018 test for hematological malignancies

https://t.co/jq88wT5asJ

#medtech #denovo

Here are any URLs found in the article text:

https://t.co/jq88wT5asJ

#medtech

Articles can be found by scrolling down the page at https://www.bioworld.com/topics/85-bioworld-medtech .

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DATE: May 09, 2025 at 06:30AM
SOURCE: BioWorld MedTech

Direct article link at end of text block below.

.@FDADeviceInfo posts regulation for 2018 test for hematological malignancies

https://t.co/jq88wT5asJ

#medtech #denovo

Here are any URLs found in the article text:

https://t.co/jq88wT5asJ

#medtech

Articles can be found by scrolling down the page at https://www.bioworld.com/topics/85-bioworld-medtech .

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DATE: May 08, 2025 at 05:30PM
SOURCE: BioWorld MedTech

Direct article link at end of text block below.

.@FDADeviceInfo posts regulation for 2018 test for hematological malignancies

https://t.co/jq88wT5asJ

#medtech #denovo

Here are any URLs found in the article text:

https://t.co/jq88wT5asJ

#medtech

Articles can be found by scrolling down the page at https://www.bioworld.com/topics/85-bioworld-medtech .

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Since 1991 The National Psychologist has focused on keeping practicing psychologists current with news, information and items of interest. Check them out for more free articles, resources, and subscription information: https://www.nationalpsychologist.com
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DATE: May 08, 2025 at 05:30PM
SOURCE: BioWorld MedTech

Direct article link at end of text block below.

.@FDADeviceInfo posts regulation for 2018 test for hematological malignancies

https://t.co/jq88wT5asJ

#medtech #denovo

Here are any URLs found in the article text:

https://t.co/jq88wT5asJ

#medtech

Articles can be found by scrolling down the page at https://www.bioworld.com/topics/85-bioworld-medtech .

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NYU Information for Practice puts out 400-500 good quality health-related research posts per week but its too much for many people, so that bot is limited to just subscribers. You can read it or subscribe at @PsychResearchBot
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Since 1991 The National Psychologist has focused on keeping practicing psychologists current with news, information and items of interest. Check them out for more free articles, resources, and subscription information: https://www.nationalpsychologist.com
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#healthcare #healthtech #healthcaretech #healthtechnology #medgadget #medicine #doctor #hospital #medtech

DATE: May 08, 2025 at 05:30PM
SOURCE: BioWorld MedTech

Direct article link at end of text block below.

.@FDADeviceInfo posts regulation for 2018 test for hematological malignancies

https://t.co/jq88wT5asJ

#medtech #denovo

Here are any URLs found in the article text:

https://t.co/jq88wT5asJ

#medtech

Articles can be found by scrolling down the page at https://www.bioworld.com/topics/85-bioworld-medtech .

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Pipeline release! nf-core/bacass v2.4.0 - v2.4.0!

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.4.0

#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.4.0 - v2.4.0!

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.4.0

#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.4.0 - v2.4.0!

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.4.0

#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.4.0 - v2.4.0!

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.4.0

#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/denovotranscript v1.0.0 - nf-core/denovotranscript v1.0.0!

Please see the changelog: https://github.com/nf-core/denovotranscript/releases/tag/1.0.0

#denovo-assembly #rna-seq #transcriptome #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/denovotranscript v1.0.0 - nf-core/denovotranscript v1.0.0!

Please see the changelog: https://github.com/nf-core/denovotranscript/releases/tag/1.0.0

#denovo-assembly #rna-seq #transcriptome #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/denovotranscript v1.0.0 - nf-core/denovotranscript v1.0.0!

Please see the changelog: https://github.com/nf-core/denovotranscript/releases/tag/1.0.0

#denovo-assembly #rna-seq #transcriptome #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/denovotranscript v1.0.0 - nf-core/denovotranscript v1.0.0!

Please see the changelog: https://github.com/nf-core/denovotranscript/releases/tag/1.0.0

#denovo-assembly #rna-seq #transcriptome #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.3.1 - nf-core/bacass v2.3.1!

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.3.1

#assembly #bacterial-genomes #denovo #denovo-assembly #genome-assembly #hybrid-assembly #nanopore #nanopore-sequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.3.1 - nf-core/bacass v2.3.1!

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.3.1

#assembly #bacterial-genomes #denovo #denovo-assembly #genome-assembly #hybrid-assembly #nanopore #nanopore-sequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.3.1 - nf-core/bacass v2.3.1!

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.3.1

#assembly #bacterial-genomes #denovo #denovo-assembly #genome-assembly #hybrid-assembly #nanopore #nanopore-sequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.3.1 - nf-core/bacass v2.3.1!

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.3.1

#assembly #bacterial-genomes #denovo #denovo-assembly #genome-assembly #hybrid-assembly #nanopore #nanopore-sequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.3.0 - !

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.3.0

#assembly #bacterial-genomes #denovo #denovo-assembly #genome-assembly #hybrid-assembly #nanopore #nanopore-sequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.3.0 - !

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.3.0

#assembly #bacterial-genomes #denovo #denovo-assembly #genome-assembly #hybrid-assembly #nanopore #nanopore-sequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.3.0 - !

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.3.0

#assembly #bacterial-genomes #denovo #denovo-assembly #genome-assembly #hybrid-assembly #nanopore #nanopore-sequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.3.0 - !

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.3.0

#assembly #bacterial-genomes #denovo #denovo-assembly #genome-assembly #hybrid-assembly #nanopore #nanopore-sequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.2.0 - !

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.2.0

#assembly #bacterial-genomes #denovo #denovo-assembly #genome-assembly #hybrid-assembly #nanopore #nanopore-sequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.2.0 - !

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.2.0

#assembly #bacterial-genomes #denovo #denovo-assembly #genome-assembly #hybrid-assembly #nanopore #nanopore-sequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.2.0 - !

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.2.0

#assembly #bacterial-genomes #denovo #denovo-assembly #genome-assembly #hybrid-assembly #nanopore #nanopore-sequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.2.0 - !

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.2.0

#assembly #bacterial-genomes #denovo #denovo-assembly #genome-assembly #hybrid-assembly #nanopore #nanopore-sequencing #nfcore #openscience #nextflow #bioinformatics

Wednesday: A face-lifted #MiniClubman1275GT with 12” #Denovo run flat wheels/ tyres. Would you? - miniphernalia.co.uk

Wednesday: A face-lifted #MiniClubman1275GT with 12” #Denovo run flat wheels/ tyres. Would you? - miniphernalia.co.uk

Wednesday: A face-lifted #MiniClubman1275GT with 12” #Denovo run flat wheels/ tyres. Would you? - miniphernalia.co.uk

Raphael Gastrock looks at ways to distinguish adaptation from de novo learning using electroencephalography. Unfortunately we haven't found clear markers of de novo learning yet. Where do you think we should look? Come tell us!

#sfn23 #EEG #DeNovo #Adaptation PSTR216.27 Monday morning

https://www.abstractsonline.com/pp8/#!/10892/presentation/33598

https://deniseh.lab.yorku.ca/files/2023/11/Gastrock-SfN-2023.pdf

Raphael Gastrock looks at ways to distinguish adaptation from de novo learning using electroencephalography. Unfortunately we haven't found clear markers of de novo learning yet. Where do you think we should look? Come tell us!

#sfn23 #EEG #DeNovo #Adaptation PSTR216.27 Monday morning

https://www.abstractsonline.com/pp8/#!/10892/presentation/33598

https://deniseh.lab.yorku.ca/files/2023/11/Gastrock-SfN-2023.pdf

Raphael Gastrock looks at ways to distinguish adaptation from de novo learning using electroencephalography. Unfortunately we haven't found clear markers of de novo learning yet. Where do you think we should look? Come tell us!

#sfn23 #EEG #DeNovo #Adaptation PSTR216.27 Monday morning

https://www.abstractsonline.com/pp8/#!/10892/presentation/33598

https://deniseh.lab.yorku.ca/files/2023/11/Gastrock-SfN-2023.pdf

Raphael Gastrock presented preliminary results from his EEG study on differences in brain activity between #adaptation and #DeNovo learning at #SCAPPS

Spoiler: we didn't find any in the ERPs we checked so far, although the ERPs are definitely there. We'll look at other types of markers!

PowerPoint: https://deniseh.lab.yorku.ca/files/2023/10/SCAPPS_20231005_rg.pptx?x64373

The Food and Drug Administration authorized marketing of a genetic test for detecting hundreds of gene variants associated with a higher risk of developing certain cancers.

https://sciencebusiness.technewslit.com/?p=45284

#News #Press #Science #Business #Cancer #Risk #Assessment #Genetics #FDA #GeneVariants #MedicalDevice #Authorization #Clearance #DeNovo #Regulations

The Food and Drug Administration authorized marketing of a genetic test for detecting hundreds of gene variants associated with a higher risk of developing certain cancers.

https://sciencebusiness.technewslit.com/?p=45284

#News #Press #Science #Business #Cancer #Risk #Assessment #Genetics #FDA #GeneVariants #MedicalDevice #Authorization #Clearance #DeNovo #Regulations