#rnaseq — Public Fediverse posts
Live and recent posts from across the Fediverse tagged #rnaseq, aggregated by home.social.
-
Pipeline release! nf-core/scnanoseq v1.3.0 - nf-core/scnanoseq v1.3.0 - Steel Elephant!
Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics
Please see the changelog: https://github.com/nf-core/scnanoseq/releases/tag/1.3.0#10xgenomics #longreadsequencing #nanopore #rnaseq #rnaseq #scrnaseq #singlecell #nfcore #openscience #nextflow #bioinformatics
-
Pipeline release! nf-core/rnafusion v4.1.3 - 4.1.3!
RNA-seq analysis pipeline for detection of gene-fusions
Please see the changelog: https://github.com/nf-core/rnafusion/releases/tag/4.1.3#fusion #fusiongenes #genefusion #rna #rnaseq #nfcore #openscience #nextflow #bioinformatics
-
Pipeline release! nf-core/rnafusion v4.1.2 - 4.1.2!
RNA-seq analysis pipeline for detection of gene-fusions
Please see the changelog: https://github.com/nf-core/rnafusion/releases/tag/4.1.2#fusion #fusiongenes #genefusion #rna #rnaseq #nfcore #openscience #nextflow #bioinformatics
-
Pipeline release! nf-core/rnafusion v4.1.1 - 4.1.1!
RNA-seq analysis pipeline for detection of gene-fusions
Please see the changelog: https://github.com/nf-core/rnafusion/releases/tag/4.1.1#fusion #fusiongenes #genefusion #rna #rnaseq #nfcore #openscience #nextflow #bioinformatics
-
Low-hanging fruit: everyone sees it, few actually pick it up 🍎🍇🍉🍓🫐🍒
Our latest preprint explores dark pigmentation in blackberry, a plant characterized by low-hanging fruit. The combination of genomics and transcriptomics reveals insights into the genetics of pigment biosynthesis. High levels of cyanidin-3-O-glucoside were identified in blackberries, which may explain their dark coloration.
Read more: https://doi.org/10.64898/2026.05.05.723051
#PlantSciences #Pigments #Fruits #Genomics #RNAseq
@PuckerLab -
Join us for a 2-part workshop on Mastering Reproducible Enrichment Analysis! 📊
Presented by Anusuiya Bora and myself, with a focus on reproducibility and best practices.
📅 When: 12 and 13 May 2026
🕑 Time: 2:00 PM – 4:00 PM (AEST)
📍 Where: Online
💰 Cost: FREE for academic sector (places are limited!)🔗Registration form link: https://lnkd.in/gQcHggGF
#Bioinformatics #RNAseq #scRNAseq #Genomics #ReproducibleResearch #OpenScience #RStats
-
Pipeline release! nf-core/rnafusion v4.1.0 - 4.1.0!
Please see the changelog: https://github.com/nf-core/rnafusion/releases/tag/4.1.0
#fusion #fusiongenes #genefusion #rna #rnaseq #nfcore #openscience #nextflow #bioinformatics
-
Pipeline release! nf-core/scnanoseq v1.2.2 - nf-core/scnanoseq v1.2.2 - Thallium Tiger!
Please see the changelog: https://github.com/nf-core/scnanoseq/releases/tag/1.2.2
#10xgenomics #longreadsequencing #nanopore #rnaseq #scrnaseq #singlecell #nfcore #openscience #nextflow #bioinformatics
-
Pipeline release! nf-core/rnafusion v4.0.0 - 4.0.0!
Please see the changelog: https://github.com/nf-core/rnafusion/releases/tag/4.0.0
#fusion #fusiongenes #genefusion #rna #rnaseq #nfcore #openscience #nextflow #bioinformatics
-
Do you know gget by the Pachter lab? You should! It now includes efficient querying of Bgee in Python. Get high quality curated gene expression data directly in Python or command line. https://pachterlab.github.io/gget/en/bgee.html #RNAseq #biocuration #Python #scRNAseq @SIB @marcrr @fbastian @dee_unil
#bgee #Bioinformatics #RNASequencing #SingleCellRNASeq #Genomics #Transcriptomics #GeneExpression #ComputationalBiology #SingleCellAnalysis #GeneExpressionAnalysis