#nfdi4chem — Public Fediverse posts

blogged today about ChEBI, data properties in OWL ontologies, computational chemistry, atomic numbers, and basis sets

https://cthoyt.com/2026/09/04/chebi-atomic-numbers.html

all part of @NFDI4Chem, now onto a weekend full of dancing 💃

#obo #owl #chebi #obofoundry #nfdi #nfdi4chem #biocuration

new two-part blog post on automating the evaluation of predicted semantic mappings in SSSOM:

Part 1: opportunities for competitions like the Ontology Alignment Evaluation Initiative (OAEI)

https://cthoyt.com/2026/08/17/mapping-evaluation-background.html

Part 2: implementation of a new workflow based on SSSOM:

https://cthoyt.com/2026/08/17/mapping-evaluation-implementation.html

this is part of continued ontology alignment work in @NFDI4Chem and @NFDI Section Metadata

#sssom #ontologies #mappings #fair #dataintegration #dataharmonization #semanticweb #nfdi #nfdi4chem

🌱 How resource-efficient can research data management be?

Our latest NFDI4Chem Stammtisch explores the environmental footprint of storing, processing and managing research data — and approaches for more sustainable RDM.

▶️ Watch: youtu.be/fh_u_GY8Ofg

#FAIRData #RDM #GreenRDM #NFDI4Chem

@Feelix from @fiz_karlsruhe presenting #NFDI4Chem at the 2nd #NFDI overall architecture workshop https://events.gwdg.de/event/1383/timetable/#20260414

Imagine months of your research suddenly disappearing. 💥
This is where the 3-2-1 rule comes in:

🔁 3 copies of your data
💾 2 different storage media
🌍 1 external copy (e.g. in a secure infrastructure)

This is how you protect your results from hardware failures, cyber attacks or human error. 🔐

👉 Backing up is not an option. It is part of good scientific practice.

https://nfdi4chem.de/3-2-1-rule/

#researchdata #DataManagement #science #BackupStrategie #OpenScience #FAIRdata #NFDI4Chem #

Struggeling with implementing good #research #data #management?

Join our free, 4day online workshop series
02.03.26 - 05.03.2026
(9 am-12 pm)
for PhD candidates and above, with a focus on #chemistry and related disciplines.
Online, in English.
Register until 24.02.2026.

t1p.de/8msgs

#chemistry #Chemie #rdm #fdm #researchdata #Forschungsdaten #NFDI4Chem #fairdata #workshop #forschung #forschungsdatenmanagement #studieren #nfdi #onenfdi #openscience

“Imagine metabolomics data that smoothly moves between tools—no conversions, no barriers.”

At the ELIXIR BioHackathon, NFDI4Chem joined 40+ experts testing mzTab-M with real datasets. 20 successful tool-to-tool exchanges strengthened interoperability and revealed where standards must evolve. A solid step toward FAIR, reproducible MS workflows. 🔬📄

https://t1p.de/qi1tw

#chemistry #Chemie #rdm #fdm #researchdata #Forschungsdaten #NFDI4Chem #fairdata #studieren #nfdi #onenfdi #openscience

Of course we will continue!

"All chemists publish Hashtag#FAIR Hashtag#data" – that is our vision. And because we have not yet reached our goal, we have applied for and been granted three more years of funding. Many thanks again to the @dfg_public .

If you would like to read exactly what we have planned and how we intend to implement it, you can find our application here:

https://doi.org/10.3897/rio.11.e177037

#chemistry #Chemie #rdm #fdm #researchdata #Forschungsdaten #NFDI4Chem #fairdata #openscience

Watch our latest video on youtube:

Feeding Open Databases with AI-powered Literature Extraction Tools: The COCONUT–MARCUS Pipeline
by Chandu Nainala & Kohulan Rajan

youtu.be/CD8Ezj-Vs04

#chemistry #rdm #research data #NFDI4Chem #fairdata #workshop #research #study #nfdirocks

Watch our latest tool:
The NFDI4Chem Converter Service

It establishes a unified framework for the deployment of modular, chemistry-specific data converters, thereby facilitating streamlined data transformation, validation.

This initiative is expected to significantly improve the quality of data deposited in research repositories and advance the FAIR principles within chemical data management.

https://t1p.de/5rbzs

#chemistry #Chemie #rdm #researchdata #NFDI4Chem #fairdata #openscience

150,000 - Let's reach it together! 🏆

Usually creators ask for more followers. 🥱

We want something DIFFERENT. Let our search service reach 150,000 datasets.

All you have to do is upload raw data of your research to one of the 5 connected repositories.

Check it out:

search.nfdi4chem.de

#chemistry #Chemie #rdm #fdm #researchdata #Forschungsdaten #NFDI4Chem #fairdata #workshop #forschung #forschungsdatenmanagement #studieren #openscience

1 REPOSITORY - soooo many funktions!

Multidisciplinary, free of charge, easy to use, and soooo many functions - well, you better take a look at it by yourself!

t1p.de/jqruf

BTW: Our Knowledge Base (t1p.de/17vfm) offers an overview about best fitting #repository.

#chemistry #Chemie #rdm #fdm #researchdata #Forschungsdaten #NFDI4Chem #fairdata #workshop #forschung #forschungsdatenmanagement #studieren #openscience

#Stammtisch is coming up.⠀
⠀
"Science Education meets Research Data Management" by Johann-Nikolaus Seibert

Don't hesitate to register:⠀
24.10.2025 14 CET⠀
⠀
https://lnkd.in/eq4BXp93
⠀
#chemistry #Chemie #rdm #fdm #researchdata #Forschungsdaten #NFDI4Chem #fairdata #workshop #forschung #forschungsdatenmanagement #studieren #openscience #Science #Education #Research #Data #Management

The 4th Ontologies4Chem Workshop 2025 in Limburg an der Lahn will take place on 📅 11–13 November, 2025 and is jointly organized by @NFDI4Chem, @NFDI4Cat, @Physical Sciences Data Infrastructure (PSDI)ial and the @Beilstein-Institut.

Registration is closed, but a waiting list is available for automatic enrollment if a vacancy occurs. 🔗
https://www.nfdi4chem.de/event/4-workshop-ontologies4chem/?M=y
#researchdata #NFDI4Chem #fairdata

Watch our latest video on youtube:

Getting the recipe right: on extracting standardized synthesis procedures from literature
by Pedro Mendes

youtu.be/hzYXLr3KDIo

#chemistry #rdm #research data #NFDI4Chem #fairdata #workshop #research #study #nfdirocks #onenfdi

Registration is OPEN!

The preliminary agenda for the 4th Ontologies4Chem Workshop 2025 in Limburg an der Lahn is online. The workshop will take place on 📅 11–13 November, 2025 and is jointly organized by @NFDI4Chem, @NFDI4Cat, @PSDI and the @BeilsteinInstitut.

The final agenda will follow soon.
Register NOW! 🔗 https://www.nfdi4chem.de/event/4-workshop-ontologies4chem/?M=y

#researchdata #NFDI4Chem #fairdata

Watch our latest video on youtube:

How a Data Base can drive Progress in Combustion Science
by Kai Moshammer-Ruwe

youtu.be/jo-ThNsyGyc

#chemistry #rdm #research data #NFDI4Chem #fairdata #workshop #research #study #nfdirocks #onenfdi

IMAGINE: Your hard drive crashes

Funders often demand 10 years of data storage, but many drive vendors offer only a 5-year warranty. See the gap?

On
@ChemistryViews we present 10 foolproof (and reality-checked) ways to lose your #data & how you can prevent it

bit.ly/4lNwTOC

#chemistry #Chemie #rdm #fdm #researchdata #Forschungsdaten #NFDI4Chem #fairdata #workshop #forschung #forschungsdatenmanagement #studieren #openscience

Registration is OPEN!

The preliminary agenda for the 4th Ontologies4Chem Workshop 2025 in Limburg an der Lahn is online. The workshop will take place on 📅 11–13 November, 2025 and is jointly organized by @NFDI4Chem, @NFDI4Cat, Physical Sciences Data Infrastructure (PSDI) @PSDI and the @BeilsteinInstitut.

The final agenda will follow soon. Register NOW! 🔗 https://www.nfdi4chem.de/event/4-workshop-ontologies4chem/?M=y

#researchdata #NFDI4Chem #fairdata

Only 1 day left!

Registration closes on 27 August, 12 PM.

If you want to be part of our Consortium Meeting, register now.
We look forward to seeing you!

https://www.nfdi4chem.de/de/veranstaltung/consortium-meeting-6-0/

#chemistry #rdm #researchdata #NFDI4Chem #fairdata #workshop #research

At the Physical Sciences Data Infrastructure (PSDI), we have our calendars full of events for you to attend!

🎤 𝐓𝐡𝐞 𝐏𝐒𝐃𝐈 𝐒𝐡𝐨𝐰𝐜𝐚𝐬𝐞 𝐄𝐯𝐞𝐧𝐭: To be held on 17𝐭𝐡 𝐒𝐞𝐩𝐭𝐞𝐦𝐛𝐞𝐫 2025, this one-day, in-person event is designed to introduce researchers, data professionals, and institutions working at the forefront of physical sciences, to our Physical Sciences Data Infrastructure.

🎟️ 𝐑𝐞𝐠𝐢𝐬𝐭𝐞𝐫 𝐲𝐨𝐮𝐫 𝐟𝐫𝐞𝐞 𝐬𝐩𝐨𝐭 𝐨𝐧 𝐄𝐯𝐞𝐧𝐭𝐛𝐫𝐢𝐭𝐞: https://www.eventbrite.co.uk/e/psdi-showcase-tickets-1449836141929?aff=ShWeb

#PSDI #NFDI4Chem #Webinar #Workshop

Yesterday and today, the members' meeting of #DALIA,which promotes the #learning and #teaching of #data skills with a free range of #open #educational resources, took place in Mainz.

Day 1 was dedicated to the work of the 20 working groups with many good presentations and interesting discussions....

#chemistry #rdm #fdm #researchdata #researchdata #NFDI4Chem #fairdata #workshop #research #researchdatamanagement #study #education

The next #Stammtisch is coming up.⠀
⠀
A #Data #Management #Plan (#DMP) is important - for the DFG's #research funding and also for your own overview.⠀
It certainly helps that we offer a DMP template on RDMO.⠀
⠀
If you would like to find out more about this template and how to use it:
27.6.2025 14 CET⠀
⠀
Link in bio
⠀
#chemistry #rdm #fdm #research data #research data #NFDI4Chem #fairdata #workshop #research #research data management #study⠀

Biochemistry is the bridge between chemistry and the life sciences, and ELIXIR offers a European life science informatics infrastructure.

At "ELIXIR All Hands 2025" our TA lead S Neumann presented the workshop "The role and landscape of ontologies for the ELIXIR Communities".

Because #ontologies are essential for the structured storage of research data.

https://bit.ly/4ed3IB8

#chemistry #Chemie #rdm Hashtag#fdm #researchdata #Forschungsdaten #NFDI4Chem #fairdata #workshop #forschung

IMAGINE: Somebody in your team deletes or overwrites data.

Have you ever lost a year's worth of research because your data is gone? Hopefully not, but it happens!

On @ChemistryViews we present 10 foolproof (and reality-checked) ways to lose your data. Plus, of course, how you can prevent it and the tools we provide to do so.

https://bit.ly/4lNwTOC

#chemistry #researchdata #rdm #NFDI4Chem #fairdata #workshop #forschung #forschungsdatenmanagement #fdm

This week our trainer was at the Universität Münster (at IRTG 2678) and at the Rheinische Friedrich-Wilhelms-Universität Bonn. There he gave a basic workshop on Chemotion ELN.

We customise our workshops to your needs - for optimal training. If you are interested in a workshop for your team, please contact us!

https://bit.ly/423V6IF

#chemistry #research data #rdm #NFDI4Chem #fairdata #workshop #researchdatamanagement #fdm #study

It will bring together researchers, data specialists, and infrastructure providers to exchange ideas, share progress, and foster collaboration across disciplines.

You can find further details on the event webpage, with registration and agenda information to follow soon ▶️ https://www.nfdi4chem.de/event/4-workshop-ontologies4chem/

We look forward to welcoming you. 😄

#PSDI #NFDI4Chem #NFDI4Cat #Event #Research #DataInfrastructure #Chemistry #Ontologies

Next Newsletter coming out tomorrow!
Yes, you are already following us here on mastodon. But honestly, we all miss a post from time to time because we can't be online 24/7.
So if you don't want to miss anything - our newsletter is just 2 clicks away.

https://bit.ly/3Kn5fqX

#chemistry #Chemie #researchdata #Forschungsdaten #rdm #NFDI4Chem #fairdata #workshop #forschung #forschungsdatenmanagement #fdm #studieren

@NFDI @dfg_public
This version indicates the applicant institutions in red. However their node is sized according to #NFDI consortia participation.

#NFDIrocks #RDM
#Base4NFDI
#BERD
#DAPHNE4NFDI
#FAIRagro
#FAIRmat
#GHGA
#KonsortSWD
#MaRDI
#NFDI4Biodiversity
#NFDI4BIOIMAGE
#NFDI4Cat
#NFDI4Chem
#NFDI4Culture
#NFDI4DataScience
#NFDI4Earth
#NFDI4Energy
#NFDI4Health
#NFDI4Immuno
#NFDI4Ing
#NFDI4Memory
#NFDI4Microbiota
#NFDI4Objects
#nfdi4plants
#NFDIMatWerk
#NFDIxCS

542 institutions + 26 consortia + one basic service initiative = #oneNFDI ! Watch the full #NFDI network here: https://w.wiki/CMnk (created with #Wikidata)

#NFDIrocks #RDM #Base4NFDI #BERD #DAPHNE4NFDI #FAIRagro #FAIRmat #GHGA #KonsortSWD #MaRDI #NFDI4Biodiversity #NFDI4BIOIMAGE #NFDI4Cat #NFDI4Chem #NFDI4Culture #NFDI4DataScience #NFDI4Earth #NFDI4Energy #NFDI4Health #NFDI4Immuno #NFDI4Ing #NFDI4Memory #NFDI4Microbiota #NFDI4Objects #nfdi4plants #NFDIMatWerk #NFDIxCS #PUNCH4NFDI #Textplus

Not everything is easy to understand straight away. Visit our YouTube channel with 70+ videos on RDM, ELN, repos and data processing in chemistry. ⚗️
For #students👨‍🔬 as well as #professors👩‍🎓.

https://bit.ly/3DbKOMo

#chemistry #researchdata #rdm #NFDI4Chem #fairdata

First euroSAMPL blind prediction challenge finished
The NFDI4Chem-supported euroSAMPL challenge combined molecular property predictions with peer evaluation of data FAIRness

bit.ly/3W5odrP

#chemistry #researchdata #rdm #NFDI4Chem #fairdata

The Position of German Chemistry in the Digital Transformation

#nfdi4chem survey among chemists in Germany on data management

There’s an increasing trend toward the use of electronic laboratory notebooks (ELNs), with 30% of participants using them in 2023, compared to 19% in 2019.
Summary of more results: https://www.chemistryviews.org/the-position-of-german-chemistry-in-the-digital-transformation/

#chemistry #chemistryviews #chemviews #datamanagement

Finding the right repository for your own data can be difficult. A new collection on Fairsharing.org, which has already been compiled according to valid and scientific criteria, is helpful here.
It is curated by one of our project managers, Christian Bonatto Minella.
https://bit.ly/4ajpVuJ

Good luck with the right repository, and if you have any questions: just get in touch at [email protected]

#chemistry #research #data #fdm #study #NFDI4Chem #workshop #lab

The Chemistry Workflow of the Future
John Jolliffe, @NFDI4Chem , on good research data management for chemists, electronic lab notebooks, their scientific benefits, and scientists’ fears

https://www.chemistryviews.org/the-chemistry-workflow-of-the-future/

#chemistry #chemistryviews #chemviews #eln #research #nfdi4chem

REMINDER
First "Stammtisch" in 2024 is coming up

26.01.2024 14:00 - 15:00 CET
Dr. Markus Dörr will talk about "How open Semantic Web Technologies, open data formats and automation will help the Chemist to focus on science – a glimpse on LARA and SciDat"

https://bit.ly/486Rgzt

#chemistry #Chemie #researchdata #Forschungsdaten #rdm #NFDI4Chem #fairdata #workshop #forschung #forschungsdatenmanagement #fdm #studieren

Do they know it's #Chemistry? ⚗️

Because all those delicious cookies🍪 only turn into love handles because they taste so good.
And who makes sure of that? Thank God it's Chemistry.🎵

In this sense: Happy Holidays ☃️ & Merry Chemistry Everyone.

#chemistry #Chemie #researchdata #Forschungsdaten #rdm #NFDI4Chem #fairdata #workshop #forschung #forschungsdatenmanagement #fdm #studieren

Great first day at the #nfdi4chem Consortium meeting. We are all happy to meet in person.

#chemistry

Hello World!

This is our first toot on mastodon. We are looking forward to get in touch with the german and international chemical community to exchange ideas about research data.
#chemie #chemistry #research #data #nfdi4chem

We are looking forward to the #DPhG Annual Meeting in #Tuebingen. During the conference you can find us at our booth, together with #NFDI4Chem
and during the poster session feel free to visit our poster and learn how our services support your research.

Who will be there? :)
@pharmacy @researchdatamanagement #pharmazie #pharmacy