#biocuration — Public Fediverse posts
Live and recent posts from across the Fediverse tagged #biocuration, aggregated by home.social.
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We're excited to announce we're starting a podcast "Curate This!" where we interview (bio)curators and have them show us how they work (live!)
In the first episode, we talked with @drsbello about curating mouse genotypes and alleles in @MGI
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#ISMBECCB2025 keynote Q&A: How will LLMs like ChatGPT affect the future of #biocuration ? I think Bairoch is hoping for domain specific integration with safeguards - like how #TextMining was adopted - he stresses this is not a panacea and needs engineering work
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The summary of our workshop lead by @cthoyt and Ben Gyori at #biocuration2025 is now live at https://biopragmatics.github.io/workshops/biocuration2025.html
📖 Slides: https://doi.org/10.5281/zenodo.15184414
📺 Recording: https://www.youtube.com/watch?v=jmWfbH-TtkE
thanks to @biocurator and the conference organizers!
#biocuration #pids #PersistentIdentifier #persistentidentifiers #metaresolver #arks #curies
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Do you know gget by the Pachter lab? You should! It now includes efficient querying of Bgee in Python. Get high quality curated gene expression data directly in Python or command line. https://pachterlab.github.io/gget/en/bgee.html #RNAseq #biocuration #Python #scRNAseq @SIB @marcrr @fbastian @dee_unil
#bgee #Bioinformatics #RNASequencing #SingleCellRNASeq #Genomics #Transcriptomics #GeneExpression #ComputationalBiology #SingleCellAnalysis #GeneExpressionAnalysis
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Did you know you can retrieve annotation and gene expression data from #Bgee and perform #TopAnat analyses in #BioContainers? It's the fashionable way to access curated #GeneExpression 😎
https://biocontainers.pro/tools/bioconductor-bgeedb
#BioConda #Singularity #Docker #bioinformatics #biocuration #RNAseq #microarrays #UberAnat #SIB