#deconvolution — Public Fediverse posts

🧬 #Bioinformatik: Bei der RNA-Sequenzierung von Gewebeproben misst man, wie viel #RNA eines Gens in der gesamten Probe vorkommt. Mit sogenannten #Deconvolution-Verfahren versucht man dann, aus den Messdaten die Zell-Zusammensetzung zu berechnen. Ein Team von Uni Innsbruck & TU München entwickelte jetzt „omnideconv“ – ein frei zugängliches Framework, das verschiedene dieser Verfahren mit einem Benchmarking vergleichbar macht.

👉 https://omnideconv.org/

📖 https://link.springer.com/article/10.1186/s13059-026-03955-w

#Genomik

My son, Ronan, who is double-majoring in #biochemistry and #physics, is working at Georgetown University in DC this summer, on a #cancer research internship. His work focuses on #cell-type #deconvolution in spatial #transcriptomics.

I know nothing about biology, but I am assisting him with deconvolution. My MathsTodon friends, have you any guidance to offer, either in mathematics or in biology?

Ok, this is amazing.

https://inv.nadeko.net/watch?v=xDLxFGXuPEc

YT - Captain Disillusion - CD / Blur

#Blur #DeBlur #Convolution #Gaussian #DeConvolution #Fourier

'Linear Regression With Unmatched Data: A Deconvolution Perspective', by Mona Azadkia, Fadoua Balabdaoui.

http://jmlr.org/papers/v25/22-0930.html

#deconvolution #identifiability #estimator

Simply combine pixel (co-occurence and correlation) or object-based #colocalization analysis with corrections (like #deconvolution, crosstalk correction and chromatic aberration) in Huygens Workflow Processor, and increase the reliability of your measurements. Try Huygens at svi.nl

How mature are the identification algorithms for top-down #proteomics? If we use two different algorithms on the same data, do we see the same proteoforms? I was recently lucky enough to invest two whole years in top-down #bioinformatics, courtesy of Julia Chamot-Rooke. Kyowon Jeong invested some serious time to teach me about #deconvolution, too! We feature new data from Mowei Zhou for #phosphorylation proteomics.
https://doi.org/10.1021/acs.jproteome.2c00673

i guess i'll do an #introduction. i'm a #statistics phd candidate at #cornell. i work on non-parametric #deconvolution (aspirational hashtag) theory and some #FunctionalData non-parametric regression stuff too (currently with #astronomy applications; spectroscopy, photometric redshift estimation, etc).

i'm learning #persian (سلام! خوبی؟) and #running when i'm not doing stats or #lying #prone on the #floor in #despair

i guess i'll do an #introduction. i'm a #statistics phd candidate at #cornell. i work on non-parametric #deconvolution (aspirational hashtag) theory and some #FunctionalData non-parametric regression stuff too (currently with #astronomy applications; spectroscopy, photometric redshift estimation, etc).

i'm learning #persian (سلام! خوبی؟) and #running when i'm not doing stats or #lying #prone on the #floor in #despair

i guess i'll do an #introduction. i'm a #statistics phd candidate at #cornell. i work on non-parametric #deconvolution (aspirational hashtag) theory and some #FunctionalData non-parametric regression stuff too (currently with #astronomy applications; spectroscopy, photometric redshift estimation, etc).

i'm learning #persian (سلام! خوبی؟) and #running when i'm not doing stats or #lying #prone on the #floor in #despair

i guess i'll do an #introduction. i'm a #statistics phd candidate at #cornell. i work on non-parametric #deconvolution (aspirational hashtag) theory and some #FunctionalData non-parametric regression stuff too (currently with #astronomy applications; spectroscopy, photometric redshift estimation, etc).

i'm learning #persian (سلام! خوبی؟) and #running when i'm not doing stats or #lying #prone on the #floor in #despair

i guess i'll do an #introduction. i'm a #statistics phd candidate at #cornell. i work on non-parametric #deconvolution (aspirational hashtag) theory and some #FunctionalData non-parametric regression stuff too (currently with #astronomy applications; spectroscopy, photometric redshift estimation, etc).

i'm learning #persian (سلام! خوبی؟) and #running when i'm not doing stats or #lying #prone on the #floor in #despair