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#cssinglecells23 — Public Fediverse posts

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  1. Stephen Matheson🌵🌲 @[email protected] ·

    Julia Salzman from Stanford
    salzmanlab.stanford.edu/

    now explaining
    SPLASH: Statistically Primary aLignment Agnostic Sequence Homing

    We want to rapidly survey large #genomic areas, for regulatory sites, #splicing, etc. How do we look at sequencing data today? Through a lens of alignment with reference genomes. This can fail (e.g. cancer cells with shattered genomes, #V(D)J #recombination in immune cells)

    Her metaphor: we need ground penetrating radar for #genomics

    #CSSingleCells23

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    #cssinglecells23 #genomics #recombination #v #splicing #genomic