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#metabolicpathways — Public Fediverse posts

Live and recent posts from across the Fediverse tagged #metabolicpathways, aggregated by home.social.

  1. #MetabolicPathways fans: We've got you in FB2026_01! New reports include (links at flybase.org/static/new-this-re ):
    L-VALINE CATABOLISM, L-ISOLEUCINE CATABOLISM, L-LEUCINE CATABOLISM, L-LYSINE CATABOLISM,
    L-METHIONINE CYCLE, L-METHIONINE SALVAGE PATHWAY,
    L-CYSTEINE BIOSYNTHESIS, L-PROLINE BIOSYNTHESIS
    L-SERINE BIOSYNTHESIS, GLYCINE BIOSYNTHESIS,
    GLYCINE CLEAVAGE SYSTEM,
    L-PHENYLALANINE AND L-TYROSINE METABOLISM, L-ASPARTATE AND L-ASPARAGINE METABOLISM, L-GLUTAMATE AND L-GLUTAMINE METABOLISM,

  2. 8-Jan-2026
    Researchers search for why some people’s #gut #microbes produce high alcohol levels

    Researchers have identified specific gut bacteria and #metabolicPathways that drive #alcohol production in patients with #autoBrewerySyndrome (ABS), a rare and often misunderstood condition in which people experience #intoxication without drinking alcohol

    eurekalert.org/news-releases/1

    #science #metabolism #ethanol #physiology

  3. and a GO-Causal Activity Model (GO-CAM geneontology.org/docs/gocam-ov) that is based directly on GO annotation data.

    Useful links to external resources (FlyCyc, Reactome, KEGG) and publications are provided, as well as options to export the gene list to analysis, download and orthology tools.

    For more information, see this Commentary: flybase.org/commentaries/2024_

    #FlyBaseTootorial #GeneGroups #MetabolicPathways

  4. Check out the Biochemical Pathways search at SGD (yeastgenome.org)!
    SGD blog post here: yeastgenome.org/blog/biochemic
    (grabbed from our buds at @yeastgenome on Twitter):
    YeastPathways database of #metabolicPathways, #enzymes in #buddingYeast #Saccharomyces #cerevisiae is manually curated by SGD biocurators. Search category “Biochemical #Pathways” is now available with facets (subcategories) for References, Loci
    yeastgenome.org/search?q=&cate

  5. How do intracellular pathogenic #bacteria scavenge host nutrients? @KMitosch @kiran_r_patil @TypasLab &co use 13C-mannitol to track #Salmonella's #metabolism when growing inside host cells, revealing its food sources & #MetabolicPathways #PLOSBiology plos.io/3OImjZh

  6. CW: Release Announcement CNApy 1.1.8

    New ✨CNApy version 1.1.8✨ is out, with an improved GUI experience including a history of viewed model items, a multitude of bug fixes and the new installer for windows.

    🔗  github.com/cnapy-org/CNApy/rel

    Thanks to Axel and Pavlos from the MPI for Dynamics of Complex Technical Systems

    #SystemsBiology #ComputationalBiology #Constraints #Modeling #Cobra #MetabolicPathways #CNApy

  7. CW: Release Announcement

    Please Boost :boost_requested:

    New ✨CNApy 1.1.6✨, with many new features:
    - visual OptMDFpathway/Thermodynamic FBA
    - enhanced flux feasiblity analysis
    - free linear constraints for scenarios
    - and more!

    🔗  github.com/cnapy-org/CNApy/rel

    Thanks to Axel and Pavlos from the MPI for Dynamics of Complex Technical Systems @maxplanckgesellschaft.

    #SystemsBiology #ComputationalBiology #Constraints #Modeling #Cobra #MetabolicPathways #SBML

  8. Newly discovered #bacteria and their proteins could advance our understanding of global nutrients utmsi.utexas.edu/blog/entry/ne

    New globally distributed bacterial phyla within the FCB superphylum nature.com/articles/s41467-022

    "The volume of #proteins found in these phyla that have no similarity to any known sequence is exciting. It is fascinating that these previously overlooked #microbes have different #MetabolicPathways which could support their worldwide distribution in different habitats"