#pcigenomics — Public Fediverse posts

Recommended by Gavin Douglas for #PCIgenomics based on published reviews by Kwee Boon Brandon Seah and Max Emil Schön #OpenScience https://doi.org/10.24072/pci.genomics.100233

A new #preprint #OpenScience #PeerReview by #PCIgenomics: Néron B, Denise R, Coluzzi C, Touchon M, Rocha EPC, Abby SS (2023) #MacSyFinder v2: Improved modelling and search engine to identify #molecularsystems in #genomes. #bioRxiv #Genomics https://doi.org/10.1101/2022.09.02.506364

Recommended by Sebastian Ramos-Onsins for #PCIgenomics based on published reviews by 2 anonymous reviewers #OpenScience https://doi.org/10.24072/pci.genomics.100161

A new #preprint #OpenScience #PeerReview by #PCIgenomics: Raynaud M, Gagnaire P-A, Galtier N (2023) Performance and limitations of linkage-disequilibrium-based methods for inferring the genomic landscape of recombination and detecting hotspots: a simulation study. #bioRxiv #Genomics https://doi.org/10.1101/2022.03.30.486352

Recommended by Gavin Douglas for #PCIgenomics based on published reviews by Sophie Abby and one anonymous reviewer #OpenScience https://doi.org/10.24072/pci.genomics.100166

A new #preprint #OpenScience #PeerReview by #PCIgenomics: Fortmann-Grote C, Irmer J von, Bertels F (2023) RAREFAN: A webservice to identify #REPINs and #RAYTs in #bacterialgenomes. #bioRxiv, https://doi.org/10.1101/2022.05.22.493013

A new article recommended by #PCIGenomics now published in Peer Community Journal, #genomics section! #Nucleosome patterns in four #plantpathogenicfungi with contrasted genome structures https://peercommunityjournal.org/articles/10.24072/pcjournal.227/ https://doi.org/10.24072/pcjournal.227

2/2 Recommended by Sahar Melamed for #PCIgenomics based on published reviews by Wim Wranken and one anonymous reviewer #OpenScience https://doi.org/10.24072/pci.genomics.100157

1/2 A new #preprint #OpenScience #PeerReview by #PCIgenomics: Cisneros AF et al. Toeholder: a Software for Automated Design and In Silico Validation of #ToeholdRiboswitches. #bioRxiv, https://doi.org/10.1101/2021.11.09.467922

2/2 Recommended by Sebastien Duplessis for #PCIgenomics based on published reviews by Cecile Lorrain and Thorsten Langner #OpenScience https://doi.org/10.24072/pci.genomics.100023

1/2 A new #preprint #OpenScience #PeerReview by #PCIgenomics: Simon A et al. #Botrytiscinerea strains infecting #grapevine and #tomato display contrasted repertoires of accessory chromosomes, transposons and small RNAs. #bioRxiv https://doi.org/10.1101/2022.03.07.483234

2/2 Recommended by Wirulda Pootakham for #PCIgenomics based on published reviews by three anonymous reviewers #OpenScience https://doi.org/10.24072/pci.genomics.100025

1/2 A new #preprint #OpenScience #PeerReview by #PCIgenomics: Vergne E et al. Phenotypic and transcriptomic analyses reveal major differences between apple and pear scab nonhost resistance. #bioRxiv https://doi.org/10.1101/2021.06.01.446506

I have recommended an interesting preprint in #PCIGenomics on the detection of #somatic #mutations:
https://doi.org/10.24072/pci.genomics.100024
@TiBoLeroyInEn tooted about it:
https://ecoevo.social/@TiBoLeroyInEn/109308683003654264
The authors and editorial board agreed to use a picture of mine to illustrate it. Let me explain 👇 1/3

More than happy to announce that our work on plant somatic mutations has just been recommended by @couplingdmi for #PCIGenomics

“Somatic mutation detection: a critical evaluation through simulations and reanalyses in oaks”

Work led by Sylvain Schmitt 👏
with contributions from Myriam Heuertz, Niklas Tysklind and I

Read the paper: https://www.biorxiv.org/content/10.1101/2021.10.11.462798v4

Read the recommendation here: https://genomics.peercommunityin.org/articles/rec?id=163

Soon published in #PCIJournal

Original post:
https://twitter.com/PCIgenomics/status/1589958113876402180

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