#pcigenomics — Public Fediverse posts

At PCI Genomics, we are pleased to have recommended all ERGA manuscripts and publications to date, helping to bring together this vital body of work at the heart of European biodiversity genomics.

We look forward to continuing to highlight future ERGA outputs, supporting open, collaborative science for conservation and beyond.

🔗 https://genomics.peercommunityin.org/
#ERGA #Genomics #Biodiversity #PCIGenomics #OpenScience

At PCI Genomics, we are pleased to have recommended all ERGA manuscripts and publications to date, helping to bring together this vital body of work at the heart of European biodiversity genomics.

We look forward to continuing to highlight future ERGA outputs, supporting open, collaborative science for conservation and beyond.

🔗 https://genomics.peercommunityin.org/
#ERGA #Genomics #Biodiversity #PCIGenomics #OpenScience

Recommended by Gavin Douglas for #PCIgenomics based on published reviews by Kwee Boon Brandon Seah and Max Emil Schön #OpenScience https://doi.org/10.24072/pci.genomics.100233

A new #preprint #OpenScience #PeerReview by #PCIgenomics: Néron B, Denise R, Coluzzi C, Touchon M, Rocha EPC, Abby SS (2023) #MacSyFinder v2: Improved modelling and search engine to identify #molecularsystems in #genomes. #bioRxiv #Genomics https://doi.org/10.1101/2022.09.02.506364

Recommended by Sebastian Ramos-Onsins for #PCIgenomics based on published reviews by 2 anonymous reviewers #OpenScience https://doi.org/10.24072/pci.genomics.100161

A new #preprint #OpenScience #PeerReview by #PCIgenomics: Raynaud M, Gagnaire P-A, Galtier N (2023) Performance and limitations of linkage-disequilibrium-based methods for inferring the genomic landscape of recombination and detecting hotspots: a simulation study. #bioRxiv #Genomics https://doi.org/10.1101/2022.03.30.486352

Recommended by Gavin Douglas for #PCIgenomics based on published reviews by Sophie Abby and one anonymous reviewer #OpenScience https://doi.org/10.24072/pci.genomics.100166

A new #preprint #OpenScience #PeerReview by #PCIgenomics: Fortmann-Grote C, Irmer J von, Bertels F (2023) RAREFAN: A webservice to identify #REPINs and #RAYTs in #bacterialgenomes. #bioRxiv, https://doi.org/10.1101/2022.05.22.493013

A new article recommended by #PCIGenomics now published in Peer Community Journal, #genomics section! #Nucleosome patterns in four #plantpathogenicfungi with contrasted genome structures https://peercommunityjournal.org/articles/10.24072/pcjournal.227/ https://doi.org/10.24072/pcjournal.227

2/2 Recommended by Sahar Melamed for #PCIgenomics based on published reviews by Wim Wranken and one anonymous reviewer #OpenScience https://doi.org/10.24072/pci.genomics.100157

1/2 A new #preprint #OpenScience #PeerReview by #PCIgenomics: Cisneros AF et al. Toeholder: a Software for Automated Design and In Silico Validation of #ToeholdRiboswitches. #bioRxiv, https://doi.org/10.1101/2021.11.09.467922

2/2 Recommended by Sebastien Duplessis for #PCIgenomics based on published reviews by Cecile Lorrain and Thorsten Langner #OpenScience https://doi.org/10.24072/pci.genomics.100023

1/2 A new #preprint #OpenScience #PeerReview by #PCIgenomics: Simon A et al. #Botrytiscinerea strains infecting #grapevine and #tomato display contrasted repertoires of accessory chromosomes, transposons and small RNAs. #bioRxiv https://doi.org/10.1101/2022.03.07.483234

2/2 Recommended by Wirulda Pootakham for #PCIgenomics based on published reviews by three anonymous reviewers #OpenScience https://doi.org/10.24072/pci.genomics.100025

1/2 A new #preprint #OpenScience #PeerReview by #PCIgenomics: Vergne E et al. Phenotypic and transcriptomic analyses reveal major differences between apple and pear scab nonhost resistance. #bioRxiv https://doi.org/10.1101/2021.06.01.446506

I have recommended an interesting preprint in #PCIGenomics on the detection of #somatic #mutations:
https://doi.org/10.24072/pci.genomics.100024
@TiBoLeroyInEn tooted about it:
https://ecoevo.social/@TiBoLeroyInEn/109308683003654264
The authors and editorial board agreed to use a picture of mine to illustrate it. Let me explain 👇 1/3

More than happy to announce that our work on plant somatic mutations has just been recommended by @couplingdmi for #PCIGenomics

“Somatic mutation detection: a critical evaluation through simulations and reanalyses in oaks”

Work led by Sylvain Schmitt 👏
with contributions from Myriam Heuertz, Niklas Tysklind and I

Read the paper: https://www.biorxiv.org/content/10.1101/2021.10.11.462798v4

Read the recommendation here: https://genomics.peercommunityin.org/articles/rec?id=163

Soon published in #PCIJournal

Original post:
https://twitter.com/PCIgenomics/status/1589958113876402180

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