#genomefolding — Public Fediverse posts

Out today in Nature Methods: our manuscript outlining improvements we've made to Genome Architecture Mapping (GAM) and comparisons between GAM and Hi-C.TLDR: We made GAM much cheaper, show that it performs better than Hi-C at detecting complex interactions and identify a class of CTCF-enhancer interactions that are poorly detected by Hi-C. Paper at https://doi.org/10.1038/s41592-023-01903-1 and the story behind the work at https://protocolsmethods.springernature.com/posts/appreciating-the-complexity-of-dna-folding #genomics #GenomeFolding #epigenetics #paper #ctcf #HiC

Out today in Nature Methods: our manuscript outlining improvements we've made to Genome Architecture Mapping (GAM) and comparisons between GAM and Hi-C.TLDR: We made GAM much cheaper, show that it performs better than Hi-C at detecting complex interactions and identify a class of CTCF-enhancer interactions that are poorly detected by Hi-C. Paper at https://doi.org/10.1038/s41592-023-01903-1 and the story behind the work at https://protocolsmethods.springernature.com/posts/appreciating-the-complexity-of-dna-folding #genomics #GenomeFolding #epigenetics #paper #ctcf #HiC

Out today in Nature Methods: our manuscript outlining improvements we've made to Genome Architecture Mapping (GAM) and comparisons between GAM and Hi-C.TLDR: We made GAM much cheaper, show that it performs better than Hi-C at detecting complex interactions and identify a class of CTCF-enhancer interactions that are poorly detected by Hi-C. Paper at https://doi.org/10.1038/s41592-023-01903-1 and the story behind the work at https://protocolsmethods.springernature.com/posts/appreciating-the-complexity-of-dna-folding #genomics #GenomeFolding #epigenetics #paper #ctcf #HiC

Out today in Nature Methods: our manuscript outlining improvements we've made to Genome Architecture Mapping (GAM) and comparisons between GAM and Hi-C.TLDR: We made GAM much cheaper, show that it performs better than Hi-C at detecting complex interactions and identify a class of CTCF-enhancer interactions that are poorly detected by Hi-C. Paper at https://doi.org/10.1038/s41592-023-01903-1 and the story behind the work at https://protocolsmethods.springernature.com/posts/appreciating-the-complexity-of-dna-folding #genomics #GenomeFolding #epigenetics #paper #ctcf #HiC

Re-posting an #introduction after moving server:

My research group at the Wellcome Centre for Human Genetics in Oxford uses #SingleCell techniques and Genome Architecture Mapping to study #epigenetics #Chromatin and #GenomeFolding in rare #NeurodevelopmentalDisorders.

I (He/Him) love to be outside #Hiking or #Cycling and I’m a big fan of #FlightFree travel. Interested in #Equity issues in STEM, trying to read and educate myself to be a better ally.

Toot at me with your #Andor theories!

Re-posting an #introduction after moving server:

My research group at the Wellcome Centre for Human Genetics in Oxford uses #SingleCell techniques and Genome Architecture Mapping to study #epigenetics #Chromatin and #GenomeFolding in rare #NeurodevelopmentalDisorders.

I (He/Him) love to be outside #Hiking or #Cycling and I’m a big fan of #FlightFree travel. Interested in #Equity issues in STEM, trying to read and educate myself to be a better ally.

Toot at me with your #Andor theories!

Re-posting an #introduction after moving server:

My research group at the Wellcome Centre for Human Genetics in Oxford uses #SingleCell techniques and Genome Architecture Mapping to study #epigenetics #Chromatin and #GenomeFolding in rare #NeurodevelopmentalDisorders.

I (He/Him) love to be outside #Hiking or #Cycling and I’m a big fan of #FlightFree travel. Interested in #Equity issues in STEM, trying to read and educate myself to be a better ally.

Toot at me with your #Andor theories!

Re-posting an #introduction after moving server:

My research group at the Wellcome Centre for Human Genetics in Oxford uses #SingleCell techniques and Genome Architecture Mapping to study #epigenetics #Chromatin and #GenomeFolding in rare #NeurodevelopmentalDisorders.

I (He/Him) love to be outside #Hiking or #Cycling and I’m a big fan of #FlightFree travel. Interested in #Equity issues in STEM, trying to read and educate myself to be a better ally.

Toot at me with your #Andor theories!

About time for an #introduction. My research group at the Wellcome Centre for Human Genetics in Oxford uses #SingleCell techniques and Genome Architecture Mapping to study #epigenetics #Chromatin and #GenomeFolding in rare #NeurodevelopmentalDisorders.

I (He/Him) love to be outside #Hiking or #Cycling and I’m a big fan of #FlightFree travel. Interested in #Equity issues in STEM, trying to read and educate myself to be a better ally.

Toot at me with your #Andor theories!

About time for an #introduction. My research group at the Wellcome Centre for Human Genetics in Oxford uses #SingleCell techniques and Genome Architecture Mapping to study #epigenetics #Chromatin and #GenomeFolding in rare #NeurodevelopmentalDisorders.

I (He/Him) love to be outside #Hiking or #Cycling and I’m a big fan of #FlightFree travel. Interested in #Equity issues in STEM, trying to read and educate myself to be a better ally.

Toot at me with your #Andor theories!

About time for an #introduction. My research group at the Wellcome Centre for Human Genetics in Oxford uses #SingleCell techniques and Genome Architecture Mapping to study #epigenetics #Chromatin and #GenomeFolding in rare #NeurodevelopmentalDisorders.

I (He/Him) love to be outside #Hiking or #Cycling and I’m a big fan of #FlightFree travel. Interested in #Equity issues in STEM, trying to read and educate myself to be a better ally.

Toot at me with your #Andor theories!