#bioconductor — Public Fediverse posts

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We are thrilled to invite you to "Where do R packages live?" a discussion with folks from the #R foundation, #CRAN #Bioconductor #R-universe and @Posit

Let's learn from our panel about the ins-and-outs of where you might want to create a home for your R software 📦

Register today!

📆 Wed 20 May 2026
⏰ 5:00 PM AEST | 7:00 AM UTC
🔗 statsoc.org.au/event-6653060

Looking forward to nerdy chats with @visnut Stevie P. @jeroenooms and Valerie B.

#softwaredev #opensource

April 2026 will bring a new #Ubuntu 26.04, a new #Rstats release 4.6.0 and a new #BioConductor 3.23. And ... as the "future is unevenly distributed" we already have #r2u running 26.04.

See 'zero to tidyverse' now under 26.04: 10 sec, 107 binary files, 1 command.

#r2u. Fast. East. Reliable. Pick All Three.

April 2026 will bring a new #Ubuntu 26.04, a new #Rstats release 4.6.0 and a new #BioConductor 3.23. And ... as the "future is unevenly distributed" we already have #r2u running 26.04.

See 'zero to tidyverse' now under 26.04: 10 sec, 107 binary files, 1 command.

#r2u. Fast. East. Reliable. Pick All Three.

April 2026 will bring a new #Ubuntu 26.04, a new #Rstats release 4.6.0 and a new #BioConductor 3.23. And ... as the "future is unevenly distributed" we already have #r2u running 26.04.

See 'zero to tidyverse' now under 26.04: 10 sec, 107 binary files, 1 command.

#r2u. Fast. East. Reliable. Pick All Three.

April 2026 will bring a new #Ubuntu 26.04, a new #Rstats release 4.6.0 and a new #BioConductor 3.23. And ... as the "future is unevenly distributed" we already have #r2u running 26.04.

See 'zero to tidyverse' now under 26.04: 10 sec, 107 binary files, 1 command.

#r2u. Fast. East. Reliable. Pick All Three.

April 2026 will bring a new #Ubuntu 26.04, a new #Rstats release 4.6.0 and a new #BioConductor 3.23. And ... as the "future is unevenly distributed" we already have #r2u running 26.04.

See 'zero to tidyverse' now under 26.04: 10 sec, 107 binary files, 1 command.

#r2u. Fast. East. Reliable. Pick All Three.

#xcms version 4 is here!

Now we use the full power of the #Bioconductor #Spectra :rstats: package and the #RforMassSpectrometry package ecosystem 🥳

#MassSpectrometry #Metabolomics

Available through @bioconductor release 3.18

A small tutorial (incl :docker:) showcasing this update: https://bit.ly/3QxVxFf

Many thanks to Dr. Alice Yue and all attendees for making the first edition of the Flow Cytometry analysis in R/Bioconductor a great success!

Best of luck with the analysis of your data!

#Rstats #Bioconductor #flowcytometry

Today I learned how to create an interactive HTML report for gene-set enrichment analysis in R. It allows readers to examine set-level results & drill down into the underlying gene-level statistics interactively.
https://tomsing1.github.io/blog/posts/interactive-gene-set-results/
It's a static HTML page, e.g. no server (#shiny, #dash, etc) needed. Thanks a lot to the authors of the #plotly #reactable #crosstalk and #htmlwidget tools for making this so easy #til #rstats #bioconductor #gsea #compbio #visualization @lianos

Currently working on a major update of the #xcms #rstats #Bioconductor package: switch to our new, more powerful #MS infrastructure: the #Spectra package https://github.com/RforMassSpectrometry/Spectra