#xbc — Public Fediverse posts

Here's the latest variant picture for New Zealand.

EG.5.* "Eris" (46%) has become dominant over "Deltacron" XBC.* (27%).

The sample volumes seem representative up to September 23.

#COVID19 #NZ #EG_5 #Eris #XBC #Deltacron

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

Here's the latest variant picture for New Zealand.

EG.5.* "Eris" (46%) has become dominant over "Deltacron" XBC.* (27%).

The sample volumes seem representative up to September 23.

#COVID19 #NZ #EG_5 #Eris #XBC #Deltacron

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

Here's the latest variant picture for Queensland, Australia.

EG.5.* "Eris" (48%) has remained dominant during September, with no obvious challenger arising yet.

Sample volumes seem representative up to September 27.

#COVID19 #Australia #QLD #Brisbane #EG_5 #Eris #XBC #Deltacron @auscovid19

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

Here's the latest variant picture for Queensland, Australia.

EG.5.* "Eris" (48%) has remained dominant during September, with no obvious challenger arising yet.

Sample volumes seem representative up to September 27.

#COVID19 #Australia #QLD #Brisbane #EG_5 #Eris #XBC #Deltacron @auscovid19

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

Here's the latest variant picture for South Australia.

EG.5.* "Eris" (33%) appears to have become dominant over "Deltacron" XBC.* (24%) and XBB.1.16.* "Arcturus" (23%), in a somewhat chaotic mix.

Sample volumes seem representative up to October 3.

#COVID19 #Australia #SA #Adelaide #EG_5 #Eris #XBC #Deltacron #XBB_1_16 #Arcturus @auscovid19

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

Here's the latest variant picture for South Australia.

EG.5.* "Eris" (33%) appears to have become dominant over "Deltacron" XBC.* (24%) and XBB.1.16.* "Arcturus" (23%), in a somewhat chaotic mix.

Sample volumes seem representative up to October 3.

#COVID19 #Australia #SA #Adelaide #EG_5 #Eris #XBC #Deltacron #XBB_1_16 #Arcturus @auscovid19

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

Here's the latest variant picture for Western Australia.

The EG.5.* "Eris" variant (32%) has been challenged by the "Deltacron" XBC.* (16%).

#COVID19 #Australia #WA #Perth #EG_5 #Eris #XBC #Deltacron @auscovid19

Sample volumes seem representative up to September 20.

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

Here's the latest variant picture for Western Australia.

The EG.5.* "Eris" variant (32%) has been challenged by the "Deltacron" XBC.* (16%).

#COVID19 #Australia #WA #Perth #EG_5 #Eris #XBC #Deltacron @auscovid19

Sample volumes seem representative up to September 20.

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

Here's the latest variant picture for Western Australia.

The EG.5.* "Eris" variant (35%) has remained dominant, with the latest challenge coming from "Deltacron" XBC.* (26%).

#COVID19 #Australia #WA #Perth #EG_5 #Eris #XBC #Deltacron @auscovid19
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Here's the latest variant picture for Western Australia.

The EG.5.* "Eris" variant (35%) has remained dominant, with the latest challenge coming from "Deltacron" XBC.* (26%).

#COVID19 #Australia #WA #Perth #EG_5 #Eris #XBC #Deltacron @auscovid19
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Here's the latest variant picture for Queensland, Australia.

The EG.5.* "Eris" variant (56%) became dominant during August, replacing "Deltacron" XBC.* (12%).

Sample volumes seem representative up to September 14.

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

#COVID19 #Australia #QLD #Brisbane #EG_5 #Eris #XBC #Deltacron @auscovid19

Here's the latest variant picture for Queensland, Australia.

The EG.5.* "Eris" variant (56%) became dominant during August, replacing "Deltacron" XBC.* (12%).

Sample volumes seem representative up to September 14.

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

#COVID19 #Australia #QLD #Brisbane #EG_5 #Eris #XBC #Deltacron @auscovid19

Here's the latest variant picture for South Australia.

XBB.1.16.* "Arcturus" (26%) is growing recently, and looks about to displace EG.5.* "Eris" (21%) and the "Deltacron" XBC.* variants (27%).

#COVID19 #Australia #SA #Adelaide #EG_5 #Eris #XBC #Deltacron @auscovid19
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Here's the latest variant picture for South Australia.

XBB.1.16.* "Arcturus" (26%) is growing recently, and looks about to displace EG.5.* "Eris" (21%) and the "Deltacron" XBC.* variants (27%).

#COVID19 #Australia #SA #Adelaide #EG_5 #Eris #XBC #Deltacron @auscovid19
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Here's the latest variant picture for New Zealand.

The EG.5.* "Eris" variant (39%) has been battling the "Deltacron" XBC.* variants (30%).

The new BA.2.86.* "Pirola" variant has not been reported from PCR samples yet (only wastewater).

The sample volumes seem representative up to September 11.

#COVID19 #NZ #EG_5 #Eris #XBC #Deltacron
🧵

Here's the latest variant picture for New Zealand.

The EG.5.* "Eris" variant (39%) has been battling the "Deltacron" XBC.* variants (30%).

The new BA.2.86.* "Pirola" variant has not been reported from PCR samples yet (only wastewater).

The sample volumes seem representative up to September 11.

#COVID19 #NZ #EG_5 #Eris #XBC #Deltacron
🧵

Here's the latest variant picture for South Australia.

EG.5.* "Eris" (28%) has displaced the "Deltacron" XBC.* variants (24%). But there is also impressive recent growth of XBB.1.16.* "Arcturus" (25%).

#COVID19 #Australia #SA #Adelaide #EG_5 #Eris #XBC #Deltacron @auscovid19
🧵

Here's the latest variant picture for South Australia.

EG.5.* "Eris" (28%) has displaced the "Deltacron" XBC.* variants (24%). But there is also impressive recent growth of XBB.1.16.* "Arcturus" (25%).

#COVID19 #Australia #SA #Adelaide #EG_5 #Eris #XBC #Deltacron @auscovid19
🧵

Here's the latest variant picture for Queensland, Australia.

The EG.5.* "Eris" variant (49%) became dominant during August, replacing "Deltacron" XBC.* (19%).

Sample volumes seem representative up to August 29.

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

#COVID19 #Australia #QLD #Brisbane #EG_5 #Eris #XBC #Deltacron @auscovid19

Here's the latest variant picture for Queensland, Australia.

The EG.5.* "Eris" variant (49%) became dominant during August, replacing "Deltacron" XBC.* (19%).

Sample volumes seem representative up to August 29.

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

#COVID19 #Australia #QLD #Brisbane #EG_5 #Eris #XBC #Deltacron @auscovid19

Here's the latest variant picture for South Australia.

The "Deltacron" XBC.* variants (38%) are holding off the growing EG.5.* "Eris" variant (22%), for now.

#COVID19 #Australia #SA #Adelaide #XBC #Deltacron #EG_5 #Eris @auscovid19
🧵

Here's the latest variant picture for South Australia.

The "Deltacron" XBC.* variants (38%) are holding off the growing EG.5.* "Eris" variant (22%), for now.

#COVID19 #Australia #SA #Adelaide #XBC #Deltacron #EG_5 #Eris @auscovid19
🧵

Here's the latest variant picture for Queensland, Australia.

The EG.5.* "Eris" variant (28%) has become dominant, replacing "Deltacron" XBC.* (24%).

Sample volumes seem representative up to August 17.

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

#COVID19 #Australia #QLD #Brisbane #EG_5 #Eris #XBC #Deltacron @auscovid19

Here's the latest variant picture for Queensland, Australia.

The EG.5.* "Eris" variant (28%) has become dominant, replacing "Deltacron" XBC.* (24%).

Sample volumes seem representative up to August 17.

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

#COVID19 #Australia #QLD #Brisbane #EG_5 #Eris #XBC #Deltacron @auscovid19

Here's the latest variant picture for Western Australia.

XBB.1.16.* "Arcturus" (35%) has rebounded to displace the "Deltacron" XBC.* variant (19%).

The new EG.5.* "Eris" variant (12%) is growing - it's growth advantage of 4% per day over XBB.1.16.* predicts a crossover in early August.

Sample volumes look representative up to July 28.

#COVID19 #WA #XBB_1_16 #Arcturus #XBC #Deltacron #EG_5 #Eris @auscovid19

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

Here's the latest variant picture for Western Australia.

XBB.1.16.* "Arcturus" (35%) has rebounded to displace the "Deltacron" XBC.* variant (19%).

The new EG.5.* "Eris" variant (12%) is growing - it's growth advantage of 4% per day over XBB.1.16.* predicts a crossover in early August.

Sample volumes look representative up to July 28.

#COVID19 #WA #XBB_1_16 #Arcturus #XBC #Deltacron #EG_5 #Eris @auscovid19

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

Here's the latest variant picture for Tasmania, Australia.

The "Deltacron" XAY.* variant (33%) has put on a surprising sudden surge from late July onwards. This might explain the rise in cases and hospitalisations during that period.

XAY is a recombinant of Omicron BA.2 and Delta AY.45. XAY.* has been slowly evolving: XAY.1 added the Spike D253G mutation, then XAY.1.1 added Spike R346T and ORF1a K2108N. XAY.1.1.1 added Spike D1153Y and finally child lineage GL.1 added Spike D420N. GL.1 is the only sublineage present in the recent data from Tasmania.

🧵

#COVID19 #Tasmania #XAY #XBC #Deltacron @auscovid19

Here's the latest variant picture for Tasmania, Australia.

The "Deltacron" XAY.* variant (33%) has put on a surprising sudden surge from late July onwards. This might explain the rise in cases and hospitalisations during that period.

XAY is a recombinant of Omicron BA.2 and Delta AY.45. XAY.* has been slowly evolving: XAY.1 added the Spike D253G mutation, then XAY.1.1 added Spike R346T and ORF1a K2108N. XAY.1.1.1 added Spike D1153Y and finally child lineage GL.1 added Spike D420N. GL.1 is the only sublineage present in the recent data from Tasmania.

🧵

#COVID19 #Tasmania #XAY #XBC #Deltacron @auscovid19

Here's the latest variant picture for Queensland, Australia.

"Deltacron" XBC.* (26%) is now the leading variant in a messy soup. The sample volumes are low so this picture is a bit unclear.

CH.1.1.* "Orthrus" (30%), XBB.1.5.* "Kraken" (24%) and the new clan EG.5.* (7%) - broken out of the XBB.1.9.* "Hyperion" variant - are all showing signs of growth.

I've broken out the sub-lineages for each of those growing variants. EG.5.1 looks the most aggressive, following it's success in China, Portugal, Japan etc.

The mix of very different variants poses a raised immediate re-infection risk for anyone relying on natural immunity from a recent infection.

The sample volumes seem representative up to July 11.

#COVID19 #Australia #QLD #Brisbane #XBC #Deltacron #EG_5 @auscovid19

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

Here's the latest variant picture for Queensland, Australia.

"Deltacron" XBC.* (26%) is now the leading variant in a messy soup. The sample volumes are low so this picture is a bit unclear.

CH.1.1.* "Orthrus" (30%), XBB.1.5.* "Kraken" (24%) and the new clan EG.5.* (7%) - broken out of the XBB.1.9.* "Hyperion" variant - are all showing signs of growth.

I've broken out the sub-lineages for each of those growing variants. EG.5.1 looks the most aggressive, following it's success in China, Portugal, Japan etc.

The mix of very different variants poses a raised immediate re-infection risk for anyone relying on natural immunity from a recent infection.

The sample volumes seem representative up to July 11.

#COVID19 #Australia #QLD #Brisbane #XBC #Deltacron #EG_5 @auscovid19

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

Here's the latest variant picture for Western Australia.

"Deltacron" XBC.* (31%) and XBB.1.16.* "Arcturus" (31%) are the leading variants in a messy soup.

Among the individual lineages, there was recent growth in XBB.1.9.1 (12%) - a "Hyperion" sub-lineage.

The XBC.1.3 sub-lineage (14%) is the most common from that variant, vs XBC.1.6.* in South Australia.

The mix of very different variants poses a raised immediate re-infection risk for anyone relying on natural immunity from a recent infection.

The sample volumes seem representative up to July 6.

#COVID19 #Australia #QLD #Brisbane #XBB_1_16 #Arcturus #XBB_1_9 #Hyperion #XBC #Deltacron @auscovid19

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

Here's the latest variant picture for Western Australia.

"Deltacron" XBC.* (31%) and XBB.1.16.* "Arcturus" (31%) are the leading variants in a messy soup.

Among the individual lineages, there was recent growth in XBB.1.9.1 (12%) - a "Hyperion" sub-lineage.

The XBC.1.3 sub-lineage (14%) is the most common from that variant, vs XBC.1.6.* in South Australia.

The mix of very different variants poses a raised immediate re-infection risk for anyone relying on natural immunity from a recent infection.

The sample volumes seem representative up to July 6.

#COVID19 #Australia #QLD #Brisbane #XBB_1_16 #Arcturus #XBB_1_9 #Hyperion #XBC #Deltacron @auscovid19

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

Here's the latest variant picture for South Australia.

"Deltacron" XBC.* (60%) remains dominant - a globally unique scenario.

Among the individual lineages, XBC.1.6 (56%) is dominant. The recent apparent growth could be a distortion from lower sample sizes, or might signal a the emergence of a new sub-lineage.

The sample volumes seem representative up to July 8.

#COVID19 #Australia #SA #Adeliadie #XBC #Deltacron @auscovid19

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

Here's the latest variant picture for South Australia.

"Deltacron" XBC.* (60%) remains dominant - a globally unique scenario.

Among the individual lineages, XBC.1.6 (56%) is dominant. The recent apparent growth could be a distortion from lower sample sizes, or might signal a the emergence of a new sub-lineage.

The sample volumes seem representative up to July 8.

#COVID19 #Australia #SA #Adeliadie #XBC #Deltacron @auscovid19

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

Here's the latest variant picture for Queensland, Australia.

XBB.1.16.* "Arcturus" (30%), XBB.1.9.* "Hyperion" (24%) and "Deltacron" XBC.* (22%) are the leading variants in a messy soup.

Among the individual lineages, there was recent growth in EG.1 (9%) - a "Hyperion" sub-lineage.

The mix of very different variants poses a raised immediate re-infection risk for anyone relying on natural immunity from a recent infection.

The sample volumes seem representative up to July 2.

#COVID19 #Australia #QLD #Brisbane #XBB_1_16 #Arcturus #XBB_1_9 #Hyperion #XBC #Deltacron @auscovid19

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

Here's the latest variant picture for Queensland, Australia.

XBB.1.16.* "Arcturus" (30%), XBB.1.9.* "Hyperion" (24%) and "Deltacron" XBC.* (22%) are the leading variants in a messy soup.

Among the individual lineages, there was recent growth in EG.1 (9%) - a "Hyperion" sub-lineage.

The mix of very different variants poses a raised immediate re-infection risk for anyone relying on natural immunity from a recent infection.

The sample volumes seem representative up to July 2.

#COVID19 #Australia #QLD #Brisbane #XBB_1_16 #Arcturus #XBB_1_9 #Hyperion #XBC #Deltacron @auscovid19

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

Here's the latest variant picture for South Australia.

"Deltacron" XBC.* (46%) remains dominant.

XBC.1.6 is the leading sub-lineage, which features the Spike 346S and M452R mutations.

The sample volumes seem representative up to June 17.

#COVID19 #Australia #SA #Adeliadie #XBC #Deltacron @auscovid19

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

Here's the latest variant picture for South Australia.

"Deltacron" XBC.* (46%) remains dominant.

XBC.1.6 is the leading sub-lineage, which features the Spike 346S and M452R mutations.

The sample volumes seem representative up to June 17.

#COVID19 #Australia #SA #Adeliadie #XBC #Deltacron @auscovid19

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

Here's the latest variant picture for New South Wales, Australia.

"Deltacron" XBC.* (23%) is rising sharply to challenge the dominance of XBB.1.16.* "Arcturus" (29%).

XBB.2.3.* "Acrux" (15%) is also rising quite rapidly.

The mix of very different variants poses a raised immediate re-infection risk for anyone relying on natural immunity from a recent infection.

The sample volumes seem representative up to June 19.

#COVID19 #Australia #NSW #Sydney #XBC #Deltacron #XBB_2_3 #Acrux #XBB_1_16 #Arcturus @auscovid19
🧵

Here's the latest variant picture for New South Wales, Australia.

"Deltacron" XBC.* (23%) is rising sharply to challenge the dominance of XBB.1.16.* "Arcturus" (29%).

XBB.2.3.* "Acrux" (15%) is also rising quite rapidly.

The mix of very different variants poses a raised immediate re-infection risk for anyone relying on natural immunity from a recent infection.

The sample volumes seem representative up to June 19.

#COVID19 #Australia #NSW #Sydney #XBC #Deltacron #XBB_2_3 #Acrux #XBB_1_16 #Arcturus @auscovid19
🧵

Here's the latest variant picture for Western Australia.

The XBC.* Deltacron variant clan (31%) appears to have surged to dominance, although recent samples are a bit patchy.

You could throw a blanket over XBB.1.16.* "Arcturus" (20%), XBB.1.9.* "Hyperion" (19%) and CH.1.1.* "Orthrus" (17%) variants.

XBB.1.5.* "Kraken" (9%) is still significant, along with XBB.2.3.* "Acrux" (9%).

The variant mix in WA continues to be uniquely chaotic, reflecting its situation as a global crossroads. Even WA residents who've been racking up regular reinfections are likely to meet new variants capable of overcoming their immunity. Four variants are at 17%+ frequency, with another two around 10%.

The sample volumes seem representative up to May 16.

#COVID19 #Australia #WA #Perth #XBC #Deltacron #XBB_1_9 #Hyperion #XBB_1_5 #Kraken #XBB_1_16 #Arcturus #CH_1_1 #Orthrus @auscovid19
🧵

Here's the latest variant picture for Western Australia.

The XBC.* Deltacron variant clan (31%) appears to have surged to dominance, although recent samples are a bit patchy.

You could throw a blanket over XBB.1.16.* "Arcturus" (20%), XBB.1.9.* "Hyperion" (19%) and CH.1.1.* "Orthrus" (17%) variants.

XBB.1.5.* "Kraken" (9%) is still significant, along with XBB.2.3.* "Acrux" (9%).

The variant mix in WA continues to be uniquely chaotic, reflecting its situation as a global crossroads. Even WA residents who've been racking up regular reinfections are likely to meet new variants capable of overcoming their immunity. Four variants are at 17%+ frequency, with another two around 10%.

The sample volumes seem representative up to May 16.

#COVID19 #Australia #WA #Perth #XBC #Deltacron #XBB_1_9 #Hyperion #XBB_1_5 #Kraken #XBB_1_16 #Arcturus #CH_1_1 #Orthrus @auscovid19
🧵