#sequencedata — Public Fediverse posts

Next week's DEE External Seminar welcomes Kenji Fukushima (hosted by Agneesh Barua, Robinson-Rechavi Group) for a talk on harnessing public RNA-seq data for macroevolutionary gene expression analysis 🧬 Nov 15 at 12:15, Biophore Amphitheater or online https://rec.unil.ch/lives/live_80807

@marcrr

#rna #sequencedata #genes #gene_expression #

The genome is publicly available in NCBI GenBank. We have also deposited the sequence read data in the Sequence Read Archive (SRA) under BioProject PRJNA888783. You may access the #sequencedata for further #research at https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA888783

#genomics #dataanalysis #openaccess

Is more data always better? Or should we select less data of higher quality?

🚨 🧬 #bioinformatics #computationalbiology #statistics #preprint 🧬🚨
(repost trying to improve my #hashtag game)

We explored this question in the context of fitness prediction of #proteins 🧬 #mutations from MSA #sequencedata, finding a scaling law that relates the performance of statistical models to two simple data descriptors:

https://www.biorxiv.org/content/10.1101/2022.12.12.520004v1