#rnasequencing — Public Fediverse posts

🧬 What if disease isn’t written in DNA, but in how RNA is edited and spliced?

🔗 Long-Read Sequencing Reveals RNA Splicing Complexity in Human Diseases. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0052

📚 CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#RNASequencing #Genomics #Transcriptomics #PrecisionMedicine #MolecularBiology #Bioinformatics #NextGenSequencing #RNA #DNA

🧬 What if disease isn’t written in DNA, but in how RNA is edited and spliced?

🔗 Long-Read Sequencing Reveals RNA Splicing Complexity in Human Diseases. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0052

📚 CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#RNASequencing #Genomics #Transcriptomics #PrecisionMedicine #MolecularBiology #Bioinformatics #NextGenSequencing #RNA #DNA

Have you ever wanted to use recount3 processed data into #Python without using #RStats first to pull down the data?

Now you can! v 1.0 of the Python recount3 package is available! Docs are on GH, and you can install the package from pypi.

https://moseleybioinformaticslab.github.io/recount3/

#Bioinformatics #RNASequencing

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Have you ever wanted to use recount3 processed data into #Python without using #RStats first to pull down the data?

Now you can! v 1.0 of the Python recount3 package is available! Docs are on GH, and you can install the package from pypi.

https://moseleybioinformaticslab.github.io/recount3/

#Bioinformatics #RNASequencing

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Fred Hutch leaders raise $10M for new AI startup aiming to expedite drug discovery - Jeff Leek (left) and Robert Bradley, co-founders of Synthesize Bio and researcher... - https://www.geekwire.com/2025/fred-hutch-leaders-raise-10m-for-new-ai-startup-aiming-to-expedite-drug-discovery/ #fredhutchinsoncancercenter #health/lifesciences #generativegenomics #drugdiscovery #rnasequencing #synthesizebio #madronagroup #fredhutch #startups #jeffleek #biotech #funding

Fred Hutch leaders raise $10M for new AI startup aiming to expedite drug discovery - Jeff Leek (left) and Robert Bradley, co-founders of Synthesize Bio and researcher... - https://www.geekwire.com/2025/fred-hutch-leaders-raise-10m-for-new-ai-startup-aiming-to-expedite-drug-discovery/ #fredhutchinsoncancercenter #health/lifesciences #generativegenomics #drugdiscovery #rnasequencing #synthesizebio #madronagroup #fredhutch #startups #jeffleek #biotech #funding

Do you know gget by the Pachter lab? You should! It now includes efficient querying of Bgee in Python. Get high quality curated gene expression data directly in Python or command line. https://pachterlab.github.io/gget/en/bgee.html #RNAseq #biocuration #Python #scRNAseq @SIB @marcrr @fbastian @dee_unil

#bgee #Bioinformatics #RNASequencing #SingleCellRNASeq #Genomics #Transcriptomics #GeneExpression #ComputationalBiology #SingleCellAnalysis #GeneExpressionAnalysis

Do you know gget by the Pachter lab? You should! It now includes efficient querying of Bgee in Python. Get high quality curated gene expression data directly in Python or command line. https://pachterlab.github.io/gget/en/bgee.html #RNAseq #biocuration #Python #scRNAseq @SIB @marcrr @fbastian @dee_unil

#bgee #Bioinformatics #RNASequencing #SingleCellRNASeq #Genomics #Transcriptomics #GeneExpression #ComputationalBiology #SingleCellAnalysis #GeneExpressionAnalysis

"We present TEQUILA-seq, a versatile, easy-to-implement, and low-cost method for targeted long-read #RNA-seq utilizing isothermally linear-amplified capture probes. When performed on the Oxford #nanopore platform with multiple gene panels of varying sizes, TEQUILA-seq consistently and substantially enriches transcript coverage while preserving transcript #quantification."

https://www.nature.com/articles/s41467-023-40083-6

#sequencing #RNAsequencing

The time-course of cancer cachexia onset reveals biphasic transcriptional disruptions in female skeletal muscle distinct from males. https://doi.org/10.1186/s12864-023-09462-7 #LewisLungCarcinoma #BiologicalSexDimorphism #RnaSequencing #TypeIiInterferon #CancerCachexia

The time-course of cancer cachexia onset reveals biphasic transcriptional disruptions in female skeletal muscle distinct from males. https://doi.org/10.1186/s12864-023-09462-7 #LewisLungCarcinoma #BiologicalSexDimorphism #RnaSequencing #TypeIiInterferon #CancerCachexia

🩸 🧬 🖥️ 👨‍⚕️ ⚕️
@CRCHUM & @TheRealSmithLab at @CR_CHUSJ are working towards bringing molecular #PrecisionMedicine to #IntensiveCare decision support systems by leveraging #MachineLearning models and ultra-fast #RNAsequencing for improved patient care

Merci @GenomeQuebec & @IVADO_Qc

https://www.genomequebec.com/2533-en/news-genomics-in-the-digital-age-ivado-and-genome-quebec-foster-interdisciplinary-research/

Put these flow cells in my sequencer.
#rnasequencing
@[email protected] @[email protected]

Hash tags if you are looking someone to follow. I have diverse interests and while I identify as a #Nephrologist = #kidneydoc,
I will tweet about #statistics, #highperformancecomputing #bioinformatics , #RNAsequencing , #immunology and random funny (at least to me) stuff.
I absolutely think the civilization should eliminate kale - I am a #zerokale account , because of the harm and injury caused by kale salads worldwhile.

Just uploaded our poster for @[email protected] .
Simultaneous short and long RNA sequencing from the same run: microRNA, tRNA, lncRNA, coding RNAs etc.
@[email protected] did most of the hard work of course
#RNAsequencing #transcriptomics #bioinformatics
#NGS