#omengff — Public Fediverse posts

Just came across LinkML, a flexible modeling language allowing you to author schemas in #YAML that describe the structure of your data.
Validate/generate #JSON, #JSONLD, #RDF, #SPARQL, #SHACL, #ShEx, #OWL.
https://linkml.io
Thanks to #omeNGFF for heads-up

Reminder that this #OMENGFF community call is tomorrow (2023-03-15) ... in some number of timezones.

ICYMI: #OMENGFF community call next Wednesday (2023-03-15) largely focused on ways to store #AllYourMetadata ⚡️

https://forum.image.sc/t/community-call-metadata-in-ome-ngff/77570

None of that would be possible without the great #OMENGFF community! It's been great getting to know more & more people on this latest #OMENGFF paper. A very special thanks to @joshmoore for coordinating this paper and for all the work on #OMENGFF ! 👏👏👏
(4/5)

One thing that shows just how fast the community is moving: I only learned about #OMEZarr a bit more than a year ago with the Nature methods paper on #OMENGFF, which convinced me that this was the way forward: https://www.nature.com/articles/s41592-021-01326-w
(2/5)

Latest report from the #OMENGFF #Community describing #OMEZARR, a #CloudOptimized #BioImaging #DataFormat, is out now on #bioRxiv!

If you are having trouble with big, slow, or otherwise unwieldy imaging data, reach out or take a look for a #FAIR-er option.

https://www.biorxiv.org/content/10.1101/2023.02.17.528834v1

Honored to be 1 of 40 recipients of a 2-yr #cziscience #EOSS5 grant to continue work on #OMENGFF 🎉

#OME #Zarr @GerBI and #NFDI4BIOIMAGE are dedicated to the development of scalable data repositories for #bioimaging

https://chanzuckerberg.com/eoss/proposals/ngff-democratize-access-to-next-generation-bioimaging-data/

Honored to be 1 of 40 recipients of a 2-yr #cziscience #EOSS5 grant to continue work on #OMENGFF 🎉

#OME #Zarr @GerBI and #NFDI4BIOIMAGE are dedicated to the development of scalable data repositories for #bioimaging

https://chanzuckerberg.com/eoss/proposals/ngff-democratize-access-to-next-generation-bioimaging-data/

Honored to be 1 of 40 recipients of a 2-yr #cziscience #EOSS5 grant to continue work on #OMENGFF 🎉

#OME #Zarr @GerBI and #NFDI4BIOIMAGE are dedicated to the development of scalable data repositories for #bioimaging

https://chanzuckerberg.com/eoss/proposals/ngff-democratize-access-to-next-generation-bioimaging-data/

Honored to be 1 of 40 recipients of a 2-yr #cziscience #EOSS5 grant to continue work on #OMENGFF 🎉

#OME #Zarr @GerBI and #NFDI4BIOIMAGE are dedicated to the development of scalable data repositories for #bioimaging

https://chanzuckerberg.com/eoss/proposals/ngff-democratize-access-to-next-generation-bioimaging-data/

Honored to be 1 of 40 recipients of a 2-yr #cziscience #EOSS5 grant to continue work on #OMENGFF 🎉

#OME #Zarr @GerBI and #NFDI4BIOIMAGE are dedicated to the development of scalable data repositories for #bioimaging

https://chanzuckerberg.com/eoss/proposals/ngff-democratize-access-to-next-generation-bioimaging-data/