#assemblygraphs — Public Fediverse posts
Live and recent posts from across the Fediverse tagged #assemblygraphs, aggregated by home.social.
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🧬 Check out agtools, an open-source Python framework for analysing & manipulating assembly graphs.
🔗 GitHub: https://github.com/Vini2/agtools
📜 Preprint: https://www.biorxiv.org/content/10.1101/2025.09.14.676178v1🙏 Thanks to my amazing co-authors @rrwick @GB13Faithless @griggo_grig @npbhavya @linsalrob
#Bioinformatics #genomics #assembly #assemblygraphs #software
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🚀 I just released agtools – a Python API + CLI for working with assembly graphs!
⚙️ Convert, filter, clean, visualise & more.
📦 Install with pip or conda
💻 Code: https://github.com/Vini2/agtools
📖 Docs: https://agtools.readthedocs.io/⭐ Feedback, contributions, and stars are welcome!
#bioinformatics #python #genomics #assemblygraphs #opensource
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Glad to see GraphBin contributing to discover new core genera in fermented red pepper sauce metagenomes.
#bioinformatics #metagenomics #binning #assemblygraphs
https://www.sciencedirect.com/science/article/pii/S221242922301074X