#pcredux — Public Fediverse posts
Live and recent posts from across the Fediverse tagged #pcredux, aggregated by home.social.
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Following #rstats packages were maintained and are back on #CRAN now thanks to Andrej Spiess
- #dpcR, 2025-06-18, Digital PCR Analysis <10.32614/CRAN.package.dpcR>
- #MBmca, 2025-06-11, Nucleic Acid Melting Curve Analysis (https://journal.r-project.org/articles/RJ-2013-024/)
- #qpcR, 2025-06-10, Modelling and Analysis of Real-Time PCR Data <doi10.1093/bioinformatics/btn227>
- #PCRedux, 2025-06-13, Quantitative #PCR (#qPCR) Data Mining and Machine Learning Toolkit as Described in <doi:10.21105/Joss.04407> -
Most problems have been fixed in the #PCRedux package. There are still issues with the #rgl package and #Matrix is causing trouble on older platforms (especially #Ubuntu) 🤔. We're still figuring out how to solve the rgl problem, unfortunately it depends on the #qpcR package which calculates some of our key parameters 💡.
More work ahead of us. -
Last December, the #rstats package #bcp was archived. 🙄
https://cran.r-project.org/package=bcp
As my package 📁 #PCRedux 🧬 depends on it, it had a similar fate (like some others). I vainly hoped that its maintainer would bring it back to #CRAN :rstats:. My plan is in the coming months to incorporate relevant code from bpc into my package or remove the dependent function within my package. Since it is published at #JOSS [1], this is important for me.
Let's see when this works out 🤞