#julialang — Public Fediverse posts

Evolution of the temperature of baryonic matter in a tiny simulated cosmic volume, analysed with #Julialang and simulated with ENZO.

#SimulatedUniverses #astrophysics #astronomy

Can you access the new `juliaup gui` on macos with juliaup installed with brew?

I just get an error: GUI binary not found at '/opt/homebrew/bin/juliaupgui'. The juliaupgui component may not be installed.

Juliaup 1.22.3

Reported: https://github.com/JuliaLang/juliaup/issues/1593

#julialang #juliaup

I get a feeling they intended the whole 1.13 syntax highlight system as more of a programmable interface, so there's a little bit of additional work for people like me who just wants highlights out of box.

I can see there being a Julia module for syntax/repl styling collection in the future, which could be interesting.

#julialang

If you're like me and wondering what's happening with built-in syntax highlight in #Julialang 1.13. Some of your usual code highlighted under OhMyREPL might show up as regular texts since default in 1.13 is VERY conservative about highlights.

You need to copy in the monokai example from repl doc page as faces.toml in .julia/config to get something closer to OhMyREPL experience.

https://docs.julialang.org/en/v1/stdlib/REPL/#Syntax-Highlighting

Julia v1.13.0 release!!!
🟣🟢🔴
#JuliaLang
https://github.com/julialang/julia

Hmm - I hope this is just me, but if you were using Julia for any production level stuff I'd hold off on updating to 1.13 for now.

Running into strange errors if my config/startup.jl contains references to OhMyREPL, and also running into bunch of precompilation errors in different environments I didn't see before update.

#julialang

#Julialang Julia 1.13 is out! I see they have built in repl syntax highlight. How does it compare to OhMyREPL? Is it time to retire a piece of my setup?

Also it looks like juliaup ships with gui - I have mixed feelings about that one. Why not just have a separate gui option for download? Juliaup isn't the most complex cli program out there, so I'm not sure who this is aimed at.

#Julia 1.13 Highlights

https://julialang.org/blog/2026/09/julia-1.13-highlights/

I"m taking a few minutes to check out the Julia Language and see what I could do with it.
Does anyone use it for bioinformatics or public health?
#julialang #bioinformatics #publichealth

I"m taking a few minutes to check out the Julia Language and see what I could do with it.
Does anyone use it for bioinformatics or public health?
#julialang #bioinformatics #publichealth

I"m taking a few minutes to check out the Julia Language and see what I could do with it.
Does anyone use it for bioinformatics or public health?
#julialang #bioinformatics #publichealth

I"m taking a few minutes to check out the Julia Language and see what I could do with it.
Does anyone use it for bioinformatics or public health?
#julialang #bioinformatics #publichealth

I"m taking a few minutes to check out the Julia Language and see what I could do with it.
Does anyone use it for bioinformatics or public health?
#julialang #bioinformatics #publichealth

🌍💻 Networking week for our group! This week, members of our team represented our working group at two exciting international conferences — one focused on cutting-edge programming, the other on the icy frontiers of Antarctic research! 🧊 Christian and Gunnar attended the #SCAR2026 Open Science Conference in Oslo with great discussions about Antarctic science and policy! Especially, a lot of good input and ideas for the upcoming @AntarcticaInSync and IPY5 initiatives were presented. 💻 Marcus joined the JuliaCon 2026, diving into the vibrant community driving innovation in scientific computing with the Julia programming language. We're happy to see our team engaging with such diverse and impactful scientific communities — from the depths of Antarctic ice to the frontiers of computational tools! ❄️👩‍💻

#SCAR2026 #JuliaCon #JuliaLang #AntarcticResearch #ScientificComputing #Cryosphere #ResearchCommunity

I've been working on a small Julia library for working with raw nanopore sequencing signals.

It's still under development and not very mature, but maybe someone may find it useful and want to experiment with it. It provides functionality for signal-to-sequence alignments, basic signal scaling and segmentation, poly(A) tail detection, etc. If you stumble at issues or have ideas for new functionality or feedback, please reach out.

https://mzdravkov.com/docs/NanoporeSignals.jl/

#julialang #nanopore #bioinformatics

Some more #work stuff.

Getting an European Research Council (ERC) grant had this terrible outcome that I thought: now we can do in-depth, thoughtful research without cutting corners and ducktape solutions. Understanding #evolution in the #fossil record required a reproducible model representation of that record and we weren't satisfied with any of the existing models. Computer models made by (Earth) scientists are rarely very good, because we are not necessarily trained to make them, but to model events happening over hundreds of thousands of years, we crucially rely on their quality.

So we decided to develop one. Thanks to its main developer Johan Hidding @eScienceCenter and the collaboration with Peter Burgess, Xianyi Liu and @Niklas_Hohmann we have a fast, sustainable, #OpenSource package in #julialang for modeling #carbonate platforms.

The preprint is out for public review: please leave us a comment at https://egusphere.copernicus.org/preprints/2025/egusphere-2025-4561/ or try CarboKitten.jl at https://mindthegap-erc.github.io/CarboKitten.jl/
#geoscience #stratigraphy #sedimentology

#CFP for `Differentiable Almost Everything: Differentiable Relaxations, Algorithms, Operators, and Simulators`, a workshop at #ICML

https://differentiable.xyz/

https://twitter.com/FHKPetersen/status/1657283011459821569

Differentiable programming is a powerful tool, so I am quite interested in this workshop (especially as a #JuliaLang user, which has fantastic #AD support).

#AutomaticDifferentiation #ML

I'm looking for work! My current funding runs out soon, so I'm looking for what's next. More contract work? Full-time employment? Something else?

Most of my work has been in #julialang, developing #foss packages for probabilistic programming (#probprog) and #measuretheory. More generally, I'm interested in #bayesian #stats, performance algorithms, composability, and #functionalprogramming. I love learning and #mentoring, and I've been a team lead and IC, enjoying both.

Please retoot!