#uniprot — Public Fediverse posts
Live and recent posts from across the Fediverse tagged #uniprot, aggregated by home.social.
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#UniGe Prof Leuba recounts the start of #UniProt with #Swiss-Prot in 1986 (where I work). How this is an example of making data understandable, and how quality is a work in progress. This is a requirement for all scientific fields. This is not a technical question: but of scientific quality and integrity. #UniGe has the duty to train the next generation of researchers to have these qualities.
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#UniGe Prof Leuba recounts the start of #UniProt with #Swiss-Prot in 1986 (where I work). How this is an example of making data understandable, and how quality is a work in progress. This is a requirement for all scientific fields. This is not a technical question: but of scientific quality and integrity. #UniGe has the duty to train the next generation of researchers to have these qualities.
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#UniGe Prof Leuba recounts the start of #UniProt with #Swiss-Prot in 1986 (where I work). How this is an example of making data understandable, and how quality is a work in progress. This is a requirement for all scientific fields. This is not a technical question: but of scientific quality and integrity. #UniGe has the duty to train the next generation of researchers to have these qualities.
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#UniGe Prof Leuba recounts the start of #UniProt with #Swiss-Prot in 1986 (where I work). How this is an example of making data understandable, and how quality is a work in progress. This is a requirement for all scientific fields. This is not a technical question: but of scientific quality and integrity. #UniGe has the duty to train the next generation of researchers to have these qualities.
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#UniGe Prof Leuba recounts the start of #UniProt with #Swiss-Prot in 1986 (where I work). How this is an example of making data understandable, and how quality is a work in progress. This is a requirement for all scientific fields. This is not a technical question: but of scientific quality and integrity. #UniGe has the duty to train the next generation of researchers to have these qualities.
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My colleagues replied "if the SPARQL query fails ask Jerven ;)" which you can do to! Use https://www.uniprot.org/contact where I or one of the other members of the UniProt team will be happy to help you get the most out of #UniProt :)
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My colleagues replied "if the SPARQL query fails ask Jerven ;)" which you can do to! Use https://www.uniprot.org/contact where I or one of the other members of the UniProt team will be happy to help you get the most out of #UniProt :)
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My colleagues replied "if the SPARQL query fails ask Jerven ;)" which you can do to! Use https://www.uniprot.org/contact where I or one of the other members of the UniProt team will be happy to help you get the most out of #UniProt :)
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My colleagues replied "if the SPARQL query fails ask Jerven ;)" which you can do to! Use https://www.uniprot.org/contact where I or one of the other members of the UniProt team will be happy to help you get the most out of #UniProt :)
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My colleagues replied "if the SPARQL query fails ask Jerven ;)" which you can do to! Use https://www.uniprot.org/contact where I or one of the other members of the UniProt team will be happy to help you get the most out of #UniProt :)
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Google-deepmind wrote some skills for using #UniProt and I really second the advice "If a complex search query fails, try to use SPARQL instead of giving up."
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Google-deepmind wrote some skills for using #UniProt and I really second the advice "If a complex search query fails, try to use SPARQL instead of giving up."
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Google-deepmind wrote some skills for using #UniProt and I really second the advice "If a complex search query fails, try to use SPARQL instead of giving up."
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Google-deepmind wrote some skills for using #UniProt and I really second the advice "If a complex search query fails, try to use SPARQL instead of giving up."
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Google-deepmind wrote some skills for using #UniProt and I really second the advice "If a complex search query fails, try to use SPARQL instead of giving up."
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To our government officials: Please invest our tax money in science, not in stupid wars.
Let me explain... while Python is keeping busy my laptop doing number crunching, I thought I'd share with you part of process of updating GNU Health HIS genomic packages to the latest genes, symbols, human natural variants and their phenotypes / diseases for 2026. Quite a lot of work, for the betterment of the society, ad honorem.
So again to all in @EUCommission, instead of putting millions of euros in weapons and in the macabre business of war, invest in science, education and healthcare. Thank you.
#OpenScience #GNUHealth #GNU #bioinformatics #genomics #HUGO #UniProt #genetics #health #PublicHealth
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To our government officials: Please invest our tax money in science, not in stupid wars.
Let me explain... while Python is keeping busy my laptop doing number crunching, I thought I'd share with you part of process of updating GNU Health HIS genomic packages to the latest genes, symbols, human natural variants and their phenotypes / diseases for 2026. Quite a lot of work, for the betterment of the society, ad honorem.
So again to all in @EUCommission, instead of putting millions of euros in weapons and in the macabre business of war, invest in science, education and healthcare. Thank you.
#OpenScience #GNUHealth #GNU #bioinformatics #genomics #HUGO #UniProt #genetics #health #PublicHealth
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To our government officials: Please invest our tax money in science, not in stupid wars.
Let me explain... while Python is keeping busy my laptop doing number crunching, I thought I'd share with you part of process of updating GNU Health HIS genomic packages to the latest genes, symbols, human natural variants and their phenotypes / diseases for 2026. Quite a lot of work, for the betterment of the society, ad honorem.
So again to all in @EUCommission, instead of putting millions of euros in weapons and in the macabre business of war, invest in science, education and healthcare. Thank you.
#OpenScience #GNUHealth #GNU #bioinformatics #genomics #HUGO #UniProt #genetics #health #PublicHealth
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To our government officials: Please invest our tax money in science, not in stupid wars.
Let me explain... while Python is keeping busy my laptop doing number crunching, I thought I'd share with you part of process of updating GNU Health HIS genomic packages to the latest genes, symbols, human natural variants and their phenotypes / diseases for 2026. Quite a lot of work, for the betterment of the society, ad honorem.
So again to all in @EUCommission, instead of putting millions of euros in weapons and in the macabre business of war, invest in science, education and healthcare. Thank you.
#OpenScience #GNUHealth #GNU #bioinformatics #genomics #HUGO #UniProt #genetics #health #PublicHealth
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To our government officials: Please invest our tax money in science, not in stupid wars.
Let me explain... while Python is keeping busy my laptop doing number crunching, I thought I'd share with you part of process of updating GNU Health HIS genomic packages to the latest genes, symbols, human natural variants and their phenotypes / diseases for 2026. Quite a lot of work, for the betterment of the society, ad honorem.
So again to all in @EUCommission, instead of putting millions of euros in weapons and in the macabre business of war, invest in science, education and healthcare. Thank you.
#OpenScience #GNUHealth #GNU #bioinformatics #genomics #HUGO #UniProt #genetics #health #PublicHealth
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My Domain: proteome-wide scanning of TMDs
https://quantixed.org/2026/04/16/my-domain-proteome-wide-scanning-of-tmds/
#science #bioinformatics #CellBiology #proteins #Rstats #Uniprot
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My Domain: proteome-wide scanning of TMDs
https://quantixed.org/2026/04/16/my-domain-proteome-wide-scanning-of-tmds/
#science #bioinformatics #CellBiology #proteins #Rstats #Uniprot
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My Domain: proteome-wide scanning of TMDs
https://quantixed.org/2026/04/16/my-domain-proteome-wide-scanning-of-tmds/
#science #bioinformatics #CellBiology #proteins #Rstats #Uniprot
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My Domain: proteome-wide scanning of TMDs
https://quantixed.org/2026/04/16/my-domain-proteome-wide-scanning-of-tmds/
#science #bioinformatics #CellBiology #proteins #Rstats #Uniprot
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My Domain: proteome-wide scanning of TMDs
https://quantixed.org/2026/04/16/my-domain-proteome-wide-scanning-of-tmds/
#science #bioinformatics #CellBiology #proteins #Rstats #Uniprot
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Love how https://consensus.rubalkhali.science/ links ecological data to the molecular world of #UniProt with some smarts and the power of federated #SPARQL
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Love how https://consensus.rubalkhali.science/ links ecological data to the molecular world of #UniProt with some smarts and the power of federated #SPARQL
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Love how https://consensus.rubalkhali.science/ links ecological data to the molecular world of #UniProt with some smarts and the power of federated #SPARQL
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Love how https://consensus.rubalkhali.science/ links ecological data to the molecular world of #UniProt with some smarts and the power of federated #SPARQL
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Love how https://consensus.rubalkhali.science/ links ecological data to the molecular world of #UniProt with some smarts and the power of federated #SPARQL
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@abrokenjester unfortunately is a changing measure. I still regret telling the @[email protected] that #UniProt will stay smaller tan 27 billion triples :( which is 1/10th of the current size.
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@abrokenjester unfortunately is a changing measure. I still regret telling the @[email protected] that #UniProt will stay smaller tan 27 billion triples :( which is 1/10th of the current size.
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@abrokenjester unfortunately is a changing measure. I still regret telling the @[email protected] that #UniProt will stay smaller tan 27 billion triples :( which is 1/10th of the current size.
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@abrokenjester unfortunately is a changing measure. I still regret telling the @[email protected] that #UniProt will stay smaller tan 27 billion triples :( which is 1/10th of the current size.
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@abrokenjester unfortunately is a changing measure. I still regret telling the @[email protected] that #UniProt will stay smaller tan 27 billion triples :( which is 1/10th of the current size.
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@harmonia_amanda the vast majority of #SPARQL experts are autodidact! Heck I learn more from the #uniprot sparql endpoint users with their user cases than from the language spec. The joy of seeing smart scientist play with the data is amazing
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@harmonia_amanda the vast majority of #SPARQL experts are autodidact! Heck I learn more from the #uniprot sparql endpoint users with their user cases than from the language spec. The joy of seeing smart scientist play with the data is amazing
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@harmonia_amanda the vast majority of #SPARQL experts are autodidact! Heck I learn more from the #uniprot sparql endpoint users with their user cases than from the language spec. The joy of seeing smart scientist play with the data is amazing
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@harmonia_amanda the vast majority of #SPARQL experts are autodidact! Heck I learn more from the #uniprot sparql endpoint users with their user cases than from the language spec. The joy of seeing smart scientist play with the data is amazing
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@harmonia_amanda the vast majority of #SPARQL experts are autodidact! Heck I learn more from the #uniprot sparql endpoint users with their user cases than from the language spec. The joy of seeing smart scientist play with the data is amazing
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https://www.europesays.com/ie/198966/ AlphaFold Database Structure Extractor: a web server and API to download AlphaFold structures using common protein accessions | BMC Bioinformatics #algorithms #AlphaFoldDB #APIToolkit #Bioinformatics #ComputationalBiology #ComputationalBiology/Bioinformatics #ComputerAppl.InLifeSciences #Éire #IE #Ireland #Microarrays #NCBI #OpenAccess #ProteinStructure #Science #StructuralGenomics #UniProt
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User benefits of #uniprot are estimated to be on the order of 20 times higher than operational costs https://www.sib.swiss/news/uniprot-user-benefits-up-to-39-times-higher-than-operational-costs
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User benefits of #uniprot are estimated to be on the order of 20 times higher than operational costs https://www.sib.swiss/news/uniprot-user-benefits-up-to-39-times-higher-than-operational-costs
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User benefits of #uniprot are estimated to be on the order of 20 times higher than operational costs https://www.sib.swiss/news/uniprot-user-benefits-up-to-39-times-higher-than-operational-costs
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User benefits of #uniprot are estimated to be on the order of 20 times higher than operational costs https://www.sib.swiss/news/uniprot-user-benefits-up-to-39-times-higher-than-operational-costs
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User benefits of #uniprot are estimated to be on the order of 20 times higher than operational costs https://www.sib.swiss/news/uniprot-user-benefits-up-to-39-times-higher-than-operational-costs
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#UniProt The largest open+free #knowledgegraph in the life sciences. I will be talking about the why and the use cases at #semantics2025 5th of September 2025. Looking forward to seeing you all there!
https://2025-eu.semantics.cc/page/sessions?page=1nZsC6p2V3Yk73axR9Jl1NWq1IhVpkqtN
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#UniProt The largest open+free #knowledgegraph in the life sciences. I will be talking about the why and the use cases at #semantics2025 5th of September 2025. Looking forward to seeing you all there!
https://2025-eu.semantics.cc/page/sessions?page=1nZsC6p2V3Yk73axR9Jl1NWq1IhVpkqtN
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#UniProt The largest open+free #knowledgegraph in the life sciences. I will be talking about the why and the use cases at #semantics2025 5th of September 2025. Looking forward to seeing you all there!
https://2025-eu.semantics.cc/page/sessions?page=1nZsC6p2V3Yk73axR9Jl1NWq1IhVpkqtN
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#UniProt The largest open+free #knowledgegraph in the life sciences. I will be talking about the why and the use cases at #semantics2025 5th of September 2025. Looking forward to seeing you all there!
https://2025-eu.semantics.cc/page/sessions?page=1nZsC6p2V3Yk73axR9Jl1NWq1IhVpkqtN
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#UniProt The largest open+free #knowledgegraph in the life sciences. I will be talking about the why and the use cases at #semantics2025 5th of September 2025. Looking forward to seeing you all there!
https://2025-eu.semantics.cc/page/sessions?page=1nZsC6p2V3Yk73axR9Jl1NWq1IhVpkqtN
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Interesting in his #ISMBECCB2025 keynote that Amos Bairoch described as the worst decision of his career: caving to USA pressure to switch from funding model of free to academics & non-profits to use #SwissProt / #UniProt (with no login barrier), but paid access to Industry - to a free-to-all model funded by an NIH grant.
[I suspect industry lobbying at NIH there. One issue with grants is they are typically fixed term. Also, this would have been a very strong precedent for other DBs to follow - would have been more sustainable ecosystem?]
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Interesting in his #ISMBECCB2025 keynote that Amos Bairoch described as the worst decision of his career: caving to USA pressure to switch from funding model of free to academics & non-profits to use #SwissProt / #UniProt (with no login barrier), but paid access to Industry - to a free-to-all model funded by an NIH grant.
[I suspect industry lobbying at NIH there. One issue with grants is they are typically fixed term. Also, this would have been a very strong precedent for other DBs to follow - would have been more sustainable ecosystem?]
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Interesting in his #ISMBECCB2025 keynote that Amos Bairoch described as the worst decision of his career: caving to USA pressure to switch from funding model of free to academics & non-profits to use #SwissProt / #UniProt (with no login barrier), but paid access to Industry - to a free-to-all model funded by an NIH grant.
[I suspect industry lobbying at NIH there. One issue with grants is they are typically fixed term. Also, this would have been a very strong precedent for other DBs to follow - would have been more sustainable ecosystem?]
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Interesting in his #ISMBECCB2025 keynote that Amos Bairoch described as the worst decision of his career: caving to USA pressure to switch from funding model of free to academics & non-profits to use #SwissProt / #UniProt (with no login barrier), but paid access to Industry - to a free-to-all model funded by an NIH grant.
[I suspect industry lobbying at NIH there. One issue with grants is they are typically fixed term. Also, this would have been a very strong precedent for other DBs to follow - would have been more sustainable ecosystem?]