#teamtomo — Public Fediverse posts
Live and recent posts from across the Fediverse tagged #teamtomo, aggregated by home.social.
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Coming up next week: the third Dutch Structural Biology meeting! Now in Delft, on Sept 26. See program here: nvbmb.kncv.nl/biology-2025 with #teamtomo #cryoEM #nmrchat simulations and more (looks like) Organized by the #NVBMB (associated with KNCV)
Dutch Structural Biology Meeti... -
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New Title Alert: Follow_Relion_Gracefully- a complete dashboard for easy interaction with your cryo-EM data in Relion, now with full #teamtomo support!
Learn more here: https://github.com/dzyla/Follow_Relion_gracefully
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New Title Alert: Follow_Relion_Gracefully- a complete dashboard for easy interaction with your cryo-EM data in Relion, now with full #teamtomo support!
Learn more here: https://github.com/dzyla/Follow_Relion_gracefully
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New Title Alert: Follow_Relion_Gracefully- a complete dashboard for easy interaction with your cryo-EM data in Relion, now with full #teamtomo support!
Learn more here: https://github.com/dzyla/Follow_Relion_gracefully
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One highlight from Friday that I forgot: Alister Burt's talk on his efforts to build #TeamTomo, a set of community-supported software packages and metadata standards for #cryoET. This is difficult work, and less rewarding for those in academia, but so essential. It's great to see progress on this front.
The other great news from Alister's talk: Warp is now supported on Linux!
Finally, I'll remember his advice "think about geometry, and use it if you can" when assigning initial particle orientations for subtomogram averaging.
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One highlight from Friday that I forgot: Alister Burt's talk on his efforts to build #TeamTomo, a set of community-supported software packages and metadata standards for #cryoET. This is difficult work, and less rewarding for those in academia, but so essential. It's great to see progress on this front.
The other great news from Alister's talk: Warp is now supported on Linux!
Finally, I'll remember his advice "think about geometry, and use it if you can" when assigning initial particle orientations for subtomogram averaging.
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One highlight from Friday that I forgot: Alister Burt's talk on his efforts to build #TeamTomo, a set of community-supported software packages and metadata standards for #cryoET. This is difficult work, and less rewarding for those in academia, but so essential. It's great to see progress on this front.
The other great news from Alister's talk: Warp is now supported on Linux!
Finally, I'll remember his advice "think about geometry, and use it if you can" when assigning initial particle orientations for subtomogram averaging.
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One highlight from Friday that I forgot: Alister Burt's talk on his efforts to build #TeamTomo, a set of community-supported software packages and metadata standards for #cryoET. This is difficult work, and less rewarding for those in academia, but so essential. It's great to see progress on this front.
The other great news from Alister's talk: Warp is now supported on Linux!
Finally, I'll remember his advice "think about geometry, and use it if you can" when assigning initial particle orientations for subtomogram averaging.
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One highlight from Friday that I forgot: Alister Burt's talk on his efforts to build #TeamTomo, a set of community-supported software packages and metadata standards for #cryoET. This is difficult work, and less rewarding for those in academia, but so essential. It's great to see progress on this front.
The other great news from Alister's talk: Warp is now supported on Linux!
Finally, I'll remember his advice "think about geometry, and use it if you can" when assigning initial particle orientations for subtomogram averaging.
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Okay, so I'm not switching completely to #teamtomo Helical reconstruction of #amyloids can be quite fun when you get beautiful structures like this! And thanks to @sjorsscheres.bsky.social for the suggestion of higher order symmetries, it was indeed the case 😉🧪🧬🧶
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#TeamTomo is having a competition to annotate #cryoET tomograms: https://cryoetdataportal.czscience.com/competition
This is a good initiative! Especially the metadata format standardization part. I hope several good 3D particle picking programs will emerge from this.
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#TeamTomo is having a competition to annotate #cryoET tomograms: https://cryoetdataportal.czscience.com/competition
This is a good initiative! Especially the metadata format standardization part. I hope several good 3D particle picking programs will emerge from this.
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#TeamTomo is having a competition to annotate #cryoET tomograms: https://cryoetdataportal.czscience.com/competition
This is a good initiative! Especially the metadata format standardization part. I hope several good 3D particle picking programs will emerge from this.
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#TeamTomo is having a competition to annotate #cryoET tomograms: https://cryoetdataportal.czscience.com/competition
This is a good initiative! Especially the metadata format standardization part. I hope several good 3D particle picking programs will emerge from this.
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https://www.biorxiv.org/content/10.1101/2024.05.30.596601v1
We made Surforama to support particle picking on surfaces, particularly for cryoET. You can visualize surfaces in the tomogram to localize, label, and analyze proteins or other particle types.
It runs as a @napari plugin and in standalone mode.
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https://www.biorxiv.org/content/10.1101/2024.05.30.596601v1
We made Surforama to support particle picking on surfaces, particularly for cryoET. You can visualize surfaces in the tomogram to localize, label, and analyze proteins or other particle types.
It runs as a @napari plugin and in standalone mode.
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https://www.biorxiv.org/content/10.1101/2024.05.30.596601v1
We made Surforama to support particle picking on surfaces, particularly for cryoET. You can visualize surfaces in the tomogram to localize, label, and analyze proteins or other particle types.
It runs as a @napari plugin and in standalone mode.
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https://www.biorxiv.org/content/10.1101/2024.05.30.596601v1
We made Surforama to support particle picking on surfaces, particularly for cryoET. You can visualize surfaces in the tomogram to localize, label, and analyze proteins or other particle types.
It runs as a @napari plugin and in standalone mode.
-
https://www.biorxiv.org/content/10.1101/2024.05.30.596601v1
We made Surforama to support particle picking on surfaces, particularly for cryoET. You can visualize surfaces in the tomogram to localize, label, and analyze proteins or other particle types.
It runs as a @napari plugin and in standalone mode.
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Come see our deeper dive into human chromatin in situ at #cellbio2023. #teamtomo study led by Jon Chen and Tingsheng Liu. Poster P2005, Board B281, Monday Dec 4. Preprint: https://www.biorxiv.org/content/10.1101/2023.07.31.551204v1.full
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Come see our deeper dive into human chromatin in situ at #cellbio2023. #teamtomo study led by Jon Chen and Tingsheng Liu. Poster P2005, Board B281, Monday Dec 4. Preprint: https://www.biorxiv.org/content/10.1101/2023.07.31.551204v1.full
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Come see our deeper dive into human chromatin in situ at #cellbio2023. #teamtomo study led by Jon Chen and Tingsheng Liu. Poster P2005, Board B281, Monday Dec 4. Preprint: https://www.biorxiv.org/content/10.1101/2023.07.31.551204v1.full
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Cool article about the current state of #cryoET #teamTOMO
Catching proteins at play: the method revealing the cell’s inner mysteries
https://www.nature.com/articles/d41586-023-02909-7 -
Cool article about the current state of #cryoET #teamTOMO
Catching proteins at play: the method revealing the cell’s inner mysteries
https://www.nature.com/articles/d41586-023-02909-7 -
Cool article about the current state of #cryoET #teamTOMO
Catching proteins at play: the method revealing the cell’s inner mysteries
https://www.nature.com/articles/d41586-023-02909-7 -
Cool article about the current state of #cryoET #teamTOMO
Catching proteins at play: the method revealing the cell’s inner mysteries
https://www.nature.com/articles/d41586-023-02909-7 -
Postdoctoral Associate
University of Pittsburgh
Come join us for an exciting funded opportunity to explore the cell biology of #bipolar disorder and push the boundaries of imaging!
See the full job description on jobRxiv: https://jobrxiv.org/job/university-of-pittsburgh-27778-postdoctoral-associate-2/?feed_id=58234
#ScienceJobs #hiring #research #cryo-EM #dopamine #teamtomo #neuroscience #mitoc...
https://jobrxiv.org/job/university-of-pittsburgh-27778-postdoctoral-associate-2/?feed_id=58234 -
Postdoctoral Associate
University of Pittsburgh
Come join us for an exciting funded opportunity to explore the cell biology of #bipolar disorder and push the boundaries of imaging!
See the full job description on jobRxiv: https://jobrxiv.org/job/university-of-pittsburgh-27778-postdoctoral-associate-2/?feed_id=58234
#ScienceJobs #hiring #research #cryo-EM #dopamine #teamtomo #neuroscience #mitoc...
https://jobrxiv.org/job/university-of-pittsburgh-27778-postdoctoral-associate-2/?feed_id=58234 -
Postdoctoral Associate
University of Pittsburgh
Come join us for an exciting funded opportunity to explore the cell biology of #bipolar disorder and push the boundaries of imaging!
See the full job description on jobRxiv: https://jobrxiv.org/job/university-of-pittsburgh-27778-postdoctoral-associate-2/?feed_id=58234
#ScienceJobs #hiring #research #cryo-EM #dopamine #teamtomo #neuroscience #mitoc...
https://jobrxiv.org/job/university-of-pittsburgh-27778-postdoctoral-associate-2/?feed_id=58234 -
Postdoctoral Associate
University of Pittsburgh
Come join us for an exciting funded opportunity to explore the cell biology of #bipolar disorder and push the boundaries of imaging!
See the full job description on jobRxiv: https://jobrxiv.org/job/university-of-pittsburgh-27778-postdoctoral-associate-2/?feed_id=58234
#ScienceJobs #hiring #research #cryo-EM #dopamine #teamtomo #neuroscience #mitoc...
https://jobrxiv.org/job/university-of-pittsburgh-27778-postdoctoral-associate-2/?feed_id=58234 -
Postdoctoral Associate
University of Pittsburgh
Come join us for an exciting funded opportunity to explore the cell biology of #bipolar disorder and push the boundaries of imaging!
See the full job description on jobRxiv: https://jobrxiv.org/job/university-of-pittsburgh-27778-postdoctoral-associate-2/?feed_id=58234
#ScienceJobs #hiring #research #cryo-EM #dopamine #teamtomo #neuroscience #mitoc...
https://jobrxiv.org/job/university-of-pittsburgh-27778-postdoctoral-associate-2/?feed_id=58234 -
Catch up on the newest findings from the Haselbach Lab in collaboration with @univienna ⤵️
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RT @haselbachlab
First result in our tomography software endeavor. Great collaboration with the university of Vienna. #teamTomo https://twitter.com/hararpavol/status/1643432893996253188
https://twitter.com/HaselbachLab/status/1643483336264785920 -
Catch up on the newest findings from the Haselbach Lab in collaboration with @univienna ⤵️
---
RT @haselbachlab
First result in our tomography software endeavor. Great collaboration with the university of Vienna. #teamTomo https://twitter.com/hararpavol/status/1643432893996253188
https://twitter.com/HaselbachLab/status/1643483336264785920 -
Catch up on the newest findings from the Haselbach Lab in collaboration with @univienna ⤵️
---
RT @haselbachlab
First result in our tomography software endeavor. Great collaboration with the university of Vienna. #teamTomo https://twitter.com/hararpavol/status/1643432893996253188
https://twitter.com/HaselbachLab/status/1643483336264785920 -
Catch up on the newest findings from the Haselbach Lab in collaboration with @univienna ⤵️
---
RT @haselbachlab
First result in our tomography software endeavor. Great collaboration with the university of Vienna. #teamTomo https://twitter.com/hararpavol/status/1643432893996253188
https://twitter.com/HaselbachLab/status/1643483336264785920 -
Catch up on the newest findings from the Haselbach Lab in collaboration with @univienna ⤵️
---
RT @haselbachlab
First result in our tomography software endeavor. Great collaboration with the university of Vienna. #teamTomo https://twitter.com/hararpavol/status/1643432893996253188
https://twitter.com/HaselbachLab/status/1643483336264785920 -
I reprocessed the T. kivui 70S ribosomes (EMPIAR-11058) with #RELION-4 to get a ~7 Å map in situ 🤩
This map is now deposited @EMDB_EMPIAR as EMD-16451:
https://www.ebi.ac.uk/emdb/EMD-16451 -
I reprocessed the T. kivui 70S ribosomes (EMPIAR-11058) with #RELION-4 to get a ~7 Å map in situ 🤩
This map is now deposited @EMDB_EMPIAR as EMD-16451:
https://www.ebi.ac.uk/emdb/EMD-16451 -
I reprocessed the T. kivui 70S ribosomes (EMPIAR-11058) with #RELION-4 to get a ~7 Å map in situ 🤩
This map is now deposited @EMDB_EMPIAR as EMD-16451:
https://www.ebi.ac.uk/emdb/EMD-16451 -
I reprocessed the T. kivui 70S ribosomes (EMPIAR-11058) with #RELION-4 to get a ~7 Å map in situ 🤩
This map is now deposited @EMDB_EMPIAR as EMD-16451:
https://www.ebi.ac.uk/emdb/EMD-16451