#researchequals — Public Fediverse posts
Live and recent posts from across the Fediverse tagged #researchequals, aggregated by home.social.
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The #isc25 is over and I half-recovered from the weekend, too. Time to continue my thread summing up the #SnakemakeHackathon2025 !
To me, an important contribution was from Michael Jahn from the Charpentier Lab: A complete re-design of the workflow catalogue. Have a look: https://snakemake.github.io/snakemake-workflow-catalog/ - findability of ready-to-use workflows has greatly improved! Also, the description on how to contribute is now easy to find.
A detailed description has been published in the #researchequals collection https://www.researchequals.com/collections/hm1w-cg under https://doi.org/10.5281/zenodo.15574642
#Snakemake #ReproducibleComputing #ReproducibleResearch #OpenScience
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This morning, I am travelling to the #isc25 and hit a minor bug on #researchequals. Hence, no updates in the collection.
But still a few to describe without adding the latest contributions:
For instance, this one (https://zenodo.org/records/15490064) by Filipe G. Vieira: a helper function to extract checksums from files to compare with checksums Snakemake was already able to calculate. Really handy!
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Before I continue uploading - and I do have a couple of more contributions to add to the #ResearchEquals collection - first another contribution by Johanna Elena Schmitz and Jens Zentgraf made at the #SnakemakeHackathon2025
One difficulty when dealing with a different scientific question: Do I need to re-invent the wheel (read: write a Workflow from scratch?) just to address my slightly different question?
Snakemake already allowed to incorporate "alien" workflows, even #Nextflow workflows, into desired workflows. The new contribution allows for a more dynamic contribution - with very little changes.
Check it out: https://zenodo.org/records/15489694
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Scientists and researchers in my timeline, do you use micropublishing platforms like octopus.ac or researchequals.com to publish your research? If yes, I want to talk to you for a story for Nature.
#scientists #researchers #scientificPublishing #mpu #micropublishing #ResearchEquals
#journoRequest