#omics — Public Fediverse posts

https://www.europesays.com/ie/373254/ With Evo 2, AI Can Model And Design The Genetic Code For All Domains Of Life #AI #Bioethics #Bioinformatics #BioNeMo #Biosafety #Biosignatures #Biotechnology #DNA #Éire #Evo2 #Evolution #Genome #genomics #GitHub #IE #Ireland #Nanotechnology #nucleotide #Nvidia #omics #OpenAccess #OpenScience #OriginOfLife #RNA #Science #synbio

🧬 Giant DNA viruses encode their own eukaryote-like translation machinery, researchers discover

https://phys.org/news/2026-02-giant-dna-viruses-encode-eukaryote.html

#virus #microbes #molbio #translation #omics #genomics #giantvirus

Who gets to do 'omics?
https://www.botany.one/who-gets-to-do-omics/

A team of scientists has a survey. Their goal? To find out who gets to do science, and who has to be a spectator. Find out how you can help.

#PlantScience #Botany #omics

🌾 Innovations in spatial imaging could unlock higher wheat yields

https://phys.org/news/2026-01-spatial-imaging-higher-wheat-yields.html

#farming #plants #omics #biotechnology #agriculture #wheat #food #sensors #imaging

Sunday slow rereading on #neuroscience #drosophila #flybrain #electromicroscopy #connectomics #omics

Holy Molly forgot this top notch quotation!?

,There is a before and after connectome—B.C. and A.C.’

@albertcardona referencing a well-known quote from #columbiaun #TheoreticalNeuroscience Larry Abbott

with this follow-up:

,It’s the end of the beginning’

https://www.science.org/content/article/complete-map-fruit-fly-brain-circuitry-unveiled

🪅 Gut bacteria rapidly adapt to digest starches in ultra-processed foods, study finds

https://phys.org/news/2025-12-gut-bacteria-rapidly-digest-starches.html

#bacteria #food #microbiome #digestion #omics #microbes #diet #ultraprocessed

I have a paper on Biorxiv: www.biorxiv.org/content/10.6... My first preprint! An instrument capablity comparison for #proteomics for #biomanufacturing. Working towards the economical appliction of #omics technologies to industrial life science.

From Discovery to Process Cont...

🖭 VIRE: A global data platform to better understand viruses

https://phys.org/news/2025-12-vire-global-platform-viruses.html

#virus #omics #bioinformatics #life #biology #environment

This year's @bioconductor Biological Data Science Summer School in Brixen, South Tyrol (the 22nd edition!) takes place 24-29 May 2026.

We cover (sc)-RNA-seq and #spatial #omics analysis, underlying (bio)statistical topics, #multiomics, #proteomics and #metabolomics, and also programmatic interaction from #Rstats :rstats: with LLMs, all very hands-on using R/Bioconductor tools.

https://csama2026.bioconductor.eu/

Registration opens on 1 Feb.

The #iCNS meeting continues with the presentation of Work Package 2 "Molecular human brain atlas". Interesting insights, into how to select the most relevant material to represent brain regions that are associated with psychiatric disorders and into how they can be studied using multi-omics.

https://i-cns.nl/en/research/work-packages
#Neuroscience #Brain #omics #multiomics

🦠 Genomes of 24,000 previously unknown microbes revealed by new tools

https://phys.org/news/2025-11-genomes-previously-unknown-microbes-revealed.html

#microbes #bacteria #omics #ecology #life #biology #molbio

🕸️ Spiders inspire biologists to create artificial webs to capture airborne DNA for biodiversity monitoring

https://phys.org/news/2025-10-spiders-biologists-artificial-webs-capture.html

#enda #dna #spiders #biology #omics #sensors

Is spatial transcriptomics data preprocessing giving you a headache? You're not alone! 🤯
Join our webinar designed for new researchers to simplify the complex world of image-based spatial omics. We'll walk through the practical workflow step-by-step, from initial cell segmentation to cleaning up your data.
Get the foundational skills you need. 📅 Sign up here: https://t1p.de/lqbg1

#Transcriptomics #SpatialTranscriptomics #Omics #DataScience #ResearchWebinar #GHGA #ELIXIR #deNBI

🔎 'Google for DNA' enables rapid full-text searches of vast genetic archives

https://medicalxpress.com/news/2025-10-google-dna-enables-rapid-full.html

#cs #computing #biology #omics #dna #biology #bioinformatics #algorithms #hardware #search

How do you train the next generation of open-science explorers? With Galaxy, collaboration, and a bit of computational magic.
https://training.galaxyproject.org/training-material/news/2025/07/17/gta-overview.html

@galaxyproject
#UseGalaxy #GalaxyProject #EOSC #UniFreiburg #GalaxyTraining #OpenScience #Bioinformatics #DataScience #GTA2025 #EuroScienceGateway #ScienceEducation #ResearchTraining #FAIRData #MOOC #Training #CommunityScience #Omics #MachineLearning #Genomics #STEMtraining #FAIR (1/1)

How do you train the next generation of open-science explorers? With Galaxy, collaboration, and a bit of computational magic.
https://training.galaxyproject.org/training-material/news/2025/07/17/gta-overview.html

@galaxyproject
#UseGalaxy #GalaxyProject #EOSC #UniFreiburg #GalaxyTraining #OpenScience #Bioinformatics #DataScience #GTA2025 #EuroScienceGateway #ScienceEducation #ResearchTraining #FAIRData #MOOC #Training #CommunityScience #Omics #MachineLearning #Genomics #STEMtraining #FAIR (1/1)

How do you train the next generation of open-science explorers? With Galaxy, collaboration, and a bit of computational magic.
https://training.galaxyproject.org/training-material/news/2025/07/17/gta-overview.html

@galaxyproject
#UseGalaxy #GalaxyProject #EOSC #UniFreiburg #GalaxyTraining #OpenScience #Bioinformatics #DataScience #GTA2025 #EuroScienceGateway #ScienceEducation #ResearchTraining #FAIRData #MOOC #Training #CommunityScience #Omics #MachineLearning #Genomics #STEMtraining #FAIR (1/1)

How do you train the next generation of open-science explorers? With Galaxy, collaboration, and a bit of computational magic.
https://training.galaxyproject.org/training-material/news/2025/07/17/gta-overview.html

@galaxyproject
#UseGalaxy #GalaxyProject #EOSC #UniFreiburg #GalaxyTraining #OpenScience #Bioinformatics #DataScience #GTA2025 #EuroScienceGateway #ScienceEducation #ResearchTraining #FAIRData #MOOC #Training #CommunityScience #Omics #MachineLearning #Genomics #STEMtraining #FAIR (1/1)

How do you train the next generation of open-science explorers? With Galaxy, collaboration, and a bit of computational magic.
https://training.galaxyproject.org/training-material/news/2025/07/17/gta-overview.html

@galaxyproject
#UseGalaxy #GalaxyProject #EOSC #UniFreiburg #GalaxyTraining #OpenScience #Bioinformatics #DataScience #GTA2025 #EuroScienceGateway #ScienceEducation #ResearchTraining #FAIRData #MOOC #Training #CommunityScience #Omics #MachineLearning #Genomics #STEMtraining #FAIR (1/1)

The Galaxy single-cell and spatial omics community (SPOC) is thrilled to share the latest updates on tools, datasets, and collaborative initiatives driving open and reproducible single-cell and spatial omics research in 2025.
https://galaxyproject.org/news/2025-10-14-spoc-cellgenomics/

@galaxyfreiburg
#UseGalaxy #GalaxyProject #EOSC #SingleCell #SpatialOmics #Omics #Transcriptomics #Bioinformatics #Genomics #ComputationalBiology #EuroScienceGateway #OpenScience #ReproducibleResearch #GalaxyCommunity #SPOC (1/2)

The Galaxy single-cell and spatial omics community (SPOC) is thrilled to share the latest updates on tools, datasets, and collaborative initiatives driving open and reproducible single-cell and spatial omics research in 2025.
https://galaxyproject.org/news/2025-10-14-spoc-cellgenomics/

@galaxyfreiburg
#UseGalaxy #GalaxyProject #EOSC #SingleCell #SpatialOmics #Omics #Transcriptomics #Bioinformatics #Genomics #ComputationalBiology #EuroScienceGateway #OpenScience #ReproducibleResearch #GalaxyCommunity #SPOC (1/2)

The Galaxy single-cell and spatial omics community (SPOC) is thrilled to share the latest updates on tools, datasets, and collaborative initiatives driving open and reproducible single-cell and spatial omics research in 2025.
https://galaxyproject.org/news/2025-10-14-spoc-cellgenomics/

@galaxyfreiburg
#UseGalaxy #GalaxyProject #EOSC #SingleCell #SpatialOmics #Omics #Transcriptomics #Bioinformatics #Genomics #ComputationalBiology #EuroScienceGateway #OpenScience #ReproducibleResearch #GalaxyCommunity #SPOC (1/2)

The Galaxy single-cell and spatial omics community (SPOC) is thrilled to share the latest updates on tools, datasets, and collaborative initiatives driving open and reproducible single-cell and spatial omics research in 2025.
https://galaxyproject.org/news/2025-10-14-spoc-cellgenomics/

@galaxyfreiburg
#UseGalaxy #GalaxyProject #EOSC #SingleCell #SpatialOmics #Omics #Transcriptomics #Bioinformatics #Genomics #ComputationalBiology #EuroScienceGateway #OpenScience #ReproducibleResearch #GalaxyCommunity #SPOC (1/2)

The Galaxy single-cell and spatial omics community (SPOC) is thrilled to share the latest updates on tools, datasets, and collaborative initiatives driving open and reproducible single-cell and spatial omics research in 2025.
https://galaxyproject.org/news/2025-10-14-spoc-cellgenomics/

@galaxyfreiburg
#UseGalaxy #GalaxyProject #EOSC #SingleCell #SpatialOmics #Omics #Transcriptomics #Bioinformatics #Genomics #ComputationalBiology #EuroScienceGateway #OpenScience #ReproducibleResearch #GalaxyCommunity #SPOC (1/2)

The Galaxy single-cell and spatial omics community (SPOC) is thrilled to share the latest updates on tools, datasets, and collaborative initiatives driving open and reproducible single-cell and spatial omics research in 2025.
https://galaxyproject.org/news/2025-10-14-spoc-cellgenomics/

@galaxyproject
#UseGalaxy #GalaxyProject #EOSC #UniFreiburg #SingleCell #SpatialOmics #Omics #Transcriptomics #Bioinformatics #Genomics #ComputationalBiology #EuroScienceGateway #OpenScience #ReproducibleResearch (1/2)

The Galaxy single-cell and spatial omics community (SPOC) is thrilled to share the latest updates on tools, datasets, and collaborative initiatives driving open and reproducible single-cell and spatial omics research in 2025.
https://galaxyproject.org/news/2025-10-14-spoc-cellgenomics/

@galaxyproject
#UseGalaxy #GalaxyProject #EOSC #UniFreiburg #SingleCell #SpatialOmics #Omics #Transcriptomics #Bioinformatics #Genomics #ComputationalBiology #EuroScienceGateway #OpenScience #ReproducibleResearch (1/2)

The Galaxy single-cell and spatial omics community (SPOC) is thrilled to share the latest updates on tools, datasets, and collaborative initiatives driving open and reproducible single-cell and spatial omics research in 2025.
https://galaxyproject.org/news/2025-10-14-spoc-cellgenomics/

@galaxyproject
#UseGalaxy #GalaxyProject #EOSC #UniFreiburg #SingleCell #SpatialOmics #Omics #Transcriptomics #Bioinformatics #Genomics #ComputationalBiology #EuroScienceGateway #OpenScience #ReproducibleResearch (1/2)

The Galaxy single-cell and spatial omics community (SPOC) is thrilled to share the latest updates on tools, datasets, and collaborative initiatives driving open and reproducible single-cell and spatial omics research in 2025.
https://galaxyproject.org/news/2025-10-14-spoc-cellgenomics/

@galaxyproject
#UseGalaxy #GalaxyProject #EOSC #UniFreiburg #SingleCell #SpatialOmics #Omics #Transcriptomics #Bioinformatics #Genomics #ComputationalBiology #EuroScienceGateway #OpenScience #ReproducibleResearch (1/2)

The Galaxy single-cell and spatial omics community (SPOC) is thrilled to share the latest updates on tools, datasets, and collaborative initiatives driving open and reproducible single-cell and spatial omics research in 2025.
https://galaxyproject.org/news/2025-10-14-spoc-cellgenomics/

@galaxyproject
#UseGalaxy #GalaxyProject #EOSC #UniFreiburg #SingleCell #SpatialOmics #Omics #Transcriptomics #Bioinformatics #Genomics #ComputationalBiology #EuroScienceGateway #OpenScience #ReproducibleResearch (1/2)

🧠 A molecular atlas of the hippocampus: Mapping RNAs and proteins at synaptic resolution

https://medicalxpress.com/news/2025-09-molecular-atlas-hippocampus-rnas-proteins.html

#brain #neuroscience #hippocampus #omics #instruments #molbio

🌾 Barley's mosaic origin traced to five wild populations and millennia of human involvement

https://phys.org/news/2025-09-barley-mosaic-wild-populations-millennia.html

#barley #food #plants #agriculture #farming #genomics #agronomy #omics #genetics

On Day 1 of European Galaxy Days, Paul Zierep presented Precision Diagnosis and Risk Stratification of Helicobacter pylori-Induced Gastritis Using Multi-Omics Machine Learning Signatures Or The Synergy Between Complex Research Projects and Galaxy.

#helicobacter #EGD2025 #galaxyproject #diagnosis #eosc #fair #omics #open_science

On Day 1 of European Galaxy Days, Marisa Loach presented The Single Cell and Spatial Omics Community.
Read more: https://galaxyproject.org/community/sig/singlecell/

@galaxyfreiburg
#community #EGD2025 #spatial_omics #galaxyproject #single_cell #eosc #fair #omics #open_science

Does anyone have experience with the new ultima genome sequencing technology? Does it compare well to illumina?

It is apparently cheaper , but I was not sure about the quality.

#genomics #sequencing #omics #illumina

🔦 Scientists develop faster technique to uncover hidden gene switches

https://phys.org/news/2025-09-scientists-faster-technique-uncover-hidden.html

#biology #molbio #dna #genetics #omics #regulation #switch #biotech

PacBio Targets Carrier Screening, Aims to Simplify Genetic Testing

PacBio is known in the genomics space for its HiFi sequencing technology—which provides long, highly accurate reads. But…
#NewsBeep #News #Genetics #Ataxia #fragilexsyndrome #Genes #genetictesting(diagnostictechnique) #High-throughputscreening #industrynews #neurologicalsymptoms #omics #pacbio #Science #spinalmuscularatrophy #topics #UK #UnitedKingdom
https://www.newsbeep.com/uk/154060/

PacBio Targets Carrier Screening, Aims to Simplify Genetic Testing

PacBio is known in the genomics space for its HiFi sequencing technology—which provides long, highly accurate reads. But…
#NewsBeep #News #Genetics #Ataxia #AU #Australia #fragilexsyndrome #Genes #genetictesting(diagnostictechnique) #High-throughputscreening #IndustryNews #neurologicalsymptoms #omics #pacbio #Science #spinalmuscularatrophy #topics
https://www.newsbeep.com/au/162045/

A new Collection on #cancer is out @PLOSBiology! We delve into how #omics technologies are helping researchers understand the #tumor #microenvironment (TME)

Edited by Yibin Kang, who wrote a great Editorial to frame the Collection, this group of Essays and Perspectives covers topics as diverse as:

- mutual plasticity of #cancer & immune cells in the #TME & why its relevance in therapy
- metabolic crosstalk between cancer and T cells, and how to leverage it to reprogram anti-tumor immune responses
- the potential of defining the 3D tumor neural niche using spatial omics & #AI technologies to identify new targeted therapy opportunities
- evolutionary selection operating across levels in cancer, highlighting how this understanding can be used to improve prevention and treatment
- mathematical models as tools for exploring the complex interplay between #cancer cells and their environment, and the role of AI in leading the way towards the next wave of tumor models
- how #MultiOmics data be leveraged to help cancer patients
- how single-cell technologies can help understand cancer metastatic niches and inform novel therapies
- a call for better preclinical models and improved understanding of stromal cell function in the TME

Senior cancer editor @PLOSBiology, Richard Hodge, discusses his vision for cancer biology at the journal in an accompanying Biologue post.

Take a look at let us know what you think!

https://plos.io/4mgHDEw

🔎 How can AI-powered tools help scientists uncover hidden connections in disease research?

🔗 Darling (v2.0): Mining disease-related databases for the detection of biomedical entity associations. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.06.025

📚 CSBJ: https://www.csbj.org/

#AIinScience #BiomedicalTextMining #Genomics #PrecisionMedicine #Bioinformatics #OpenScience #BiomedicalResearch #BiomedicalAI #LiteratureMining #SystemsBiology #Omics #KnowledgeDiscovery

🌼 Flowers unfold with surprising precision, despite unruly genes

https://phys.org/news/2025-05-unfold-precision-unruly-genes.html

#flowers #plants #botany #genomics #omics #molbio #auxin

let me shout out, to certain governments, I am proud to work at the Dept of Translational Genomics, where use study genomics, metabolomics, and other omics and translate this to the clinic

#openscience #chemistry #translational #omics

let me shout out, to certain governments, I am proud to work at the Dept of Translational Genomics, where use study genomics, metabolomics, and other omics and translate this to the clinic

#openscience #chemistry #translational #omics

let me shout out, to certain governments, I am proud to work at the Dept of Translational Genomics, where use study genomics, metabolomics, and other omics and translate this to the clinic

#openscience #chemistry #translational #omics

let me shout out, to certain governments, I am proud to work at the Dept of Translational Genomics, where use study genomics, metabolomics, and other omics and translate this to the clinic

#openscience #chemistry #translational #omics

let me shout out, to certain governments, I am proud to work at the Dept of Translational Genomics, where use study genomics, metabolomics, and other omics and translate this to the clinic

#openscience #chemistry #translational #omics

🦠 3D structure of the social amoeba genome sheds light on the transition to multicellularity

https://phys.org/news/2025-02-3d-social-amoeba-genome-transition.html

#biology #microbiology #amoeba #genomics #omics #molbio

On the second session Dave Barry @david-j-barry.bsky.social talked about empowering researchers and reproducible research, before Youssef presented his work on tracing fibres on biomedical microscopy images.
#academia #Bioinformatics #computationalbiology #omics #digitalpathology #cancerresearch

Really excited for today's Empowering Healthcare with Automated Analysis event at the London Metropolitan University!
Thank you Cefa Karabağ for organising this and inviting us talk about our work!

#academia #Bioinformatics #computationalbiology #omics #digitalpathology #cancerresearch

"certain kinds of important high-dimensional geometric features are, unfortunately, mathematically impossible to represent in the 2D Euclidean plane, no matter what method is used, leading to distorted visualizations and missed geometric, and potentially biological, insights at both local and global scales."

Wang et al. What cannot be seen correctly in 2D visualizations of single-cell ’omics data? Cell Syst. 2023 Sep 20;14(9):723–731. DOI: https://doi.org/10.1016/j.cels.2023.07.002

#genetics #tSNE #UMAP #omics

Some really great talks and discussions today on advances in virus-livestock omics at the #Turing institute, who kindly supported the event. Talks include those by Ge Wu and Marie Di Placido (pictures) from the #Pirbright Institute.

Great to have input from the #BBSRC and #SFTC #Harttree Centre too.

Looking forward to new adventures in this area...

#livestock #virus #genomics #antibody #genome #mutation #pangenome #omics #transcriptomics #spatialtranscriptomics #fmdv​