#motila — Public Fediverse posts
Live and recent posts from across the Fediverse tagged #motila, aggregated by home.social.
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Both #OMIO v0.3.0 and #MotilA v1.2.0 are out now, and both include the same new flexible #BIDS-like batch processor:
#MotilA:
📚https://motila.readthedocs.io
🧩https://motila.readthedocs.io/en/latest/changelog.html#flexible-bids-like-batch-processing#OMIO:
📚https://omio.readthedocs.io
🧩https://omio.readthedocs.io/en/latest/changelog.html#addedYou can now process #microscopy projects from nested folder trees much more flexibly, with subject/folder-tag discovery, file-pattern filters, skip-if-done logic, and persistent run/error reports.
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Both #OMIO v0.3.0 and #MotilA v1.2.0 are out now, and both include the same new flexible #BIDS-like batch processor:
#MotilA:
📚https://motila.readthedocs.io
🧩https://motila.readthedocs.io/en/latest/changelog.html#flexible-bids-like-batch-processing#OMIO:
📚https://omio.readthedocs.io
🧩https://omio.readthedocs.io/en/latest/changelog.html#addedYou can now process #microscopy projects from nested folder trees much more flexibly, with subject/folder-tag discovery, file-pattern filters, skip-if-done logic, and persistent run/error reports.
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Both #OMIO v0.3.0 and #MotilA v1.2.0 are out now, and both include the same new flexible #BIDS-like batch processor:
#MotilA:
📚https://motila.readthedocs.io
🧩https://motila.readthedocs.io/en/latest/changelog.html#flexible-bids-like-batch-processing#OMIO:
📚https://omio.readthedocs.io
🧩https://omio.readthedocs.io/en/latest/changelog.html#addedYou can now process #microscopy projects from nested folder trees much more flexibly, with subject/folder-tag discovery, file-pattern filters, skip-if-done logic, and persistent run/error reports.
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Both #OMIO v0.3.0 and #MotilA v1.2.0 are out now, and both include the same new flexible #BIDS-like batch processor:
#MotilA:
📚https://motila.readthedocs.io
🧩https://motila.readthedocs.io/en/latest/changelog.html#flexible-bids-like-batch-processing#OMIO:
📚https://omio.readthedocs.io
🧩https://omio.readthedocs.io/en/latest/changelog.html#addedYou can now process #microscopy projects from nested folder trees much more flexibly, with subject/folder-tag discovery, file-pattern filters, skip-if-done logic, and persistent run/error reports.
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🚀Another #MotilA update this morning: v1.1.3 brings optional #CSV & #YAML export, which makes MotilA less reliant on proprietary file formats. … And: MotilA got its first logo 🤗
🌍 https://motila.readthedocs.io/en/latest/changelog.html#motila-v1-1-3
#BioimageAnalysis #microglia #motility #Python https://mastodon.social/@FabMusacchio/117077490957638600
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🚀Another #MotilA update this morning: v1.1.3 brings optional #CSV & #YAML export, which makes MotilA less reliant on proprietary file formats. … And: MotilA got its first logo 🤗
🌍 https://motila.readthedocs.io/en/latest/changelog.html#motila-v1-1-3
#BioimageAnalysis #microglia #motility #Python https://mastodon.social/@FabMusacchio/117077490957638600
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🚀Another #MotilA update this morning: v1.1.3 brings optional #CSV & #YAML export, which makes MotilA less reliant on proprietary file formats. … And: MotilA got its first logo 🤗
🌍 https://motila.readthedocs.io/en/latest/changelog.html#motila-v1-1-3
#BioimageAnalysis #microglia #motility #Python https://mastodon.social/@FabMusacchio/117077490957638600
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🚀Another #MotilA update this morning: v1.1.3 brings optional #CSV & #YAML export, which makes MotilA less reliant on proprietary file formats. … And: MotilA got its first logo 🤗
🌍 https://motila.readthedocs.io/en/latest/changelog.html#motila-v1-1-3
#BioimageAnalysis #microglia #motility #Python https://mastodon.social/@FabMusacchio/117077490957638600
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🚀 #MotilA now runs with #OMIO!
Today’s version release v1.1.2 adds much more flexible image I/O: #TIFF/ OME-TIFF, #CZI, #LSM & #Thorlabs RAW are now read via OMIO and normalized to #OME-compliant TZCYX axis-order, automatically. So, no more manual axis reordering before analysis 🤗
🌍 https://motila.readthedocs.io/en/latest/changelog.html#motila-v1-1-2
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🚀 #MotilA now runs with #OMIO!
Today’s version release v1.1.2 adds much more flexible image I/O: #TIFF/ OME-TIFF, #CZI, #LSM & #Thorlabs RAW are now read via OMIO and normalized to #OME-compliant TZCYX axis-order, automatically. So, no more manual axis reordering before analysis 🤗
🌍 https://motila.readthedocs.io/en/latest/changelog.html#motila-v1-1-2
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🚀 #MotilA now runs with #OMIO!
Today’s version release v1.1.2 adds much more flexible image I/O: #TIFF/ OME-TIFF, #CZI, #LSM & #Thorlabs RAW are now read via OMIO and normalized to #OME-compliant TZCYX axis-order, automatically. So, no more manual axis reordering before analysis 🤗
🌍 https://motila.readthedocs.io/en/latest/changelog.html#motila-v1-1-2
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🚀 #MotilA now runs with #OMIO!
Today’s version release v1.1.2 adds much more flexible image I/O: #TIFF/ OME-TIFF, #CZI, #LSM & #Thorlabs RAW are now read via OMIO and normalized to #OME-compliant TZCYX axis-order, automatically. So, no more manual axis reordering before analysis 🤗
🌍 https://motila.readthedocs.io/en/latest/changelog.html#motila-v1-1-2
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Happy to announce that our #JOSS paper on #MotilA is now published 😊
MotilA is an #OpenSource #Python pipeline for quantifying microglial fine-process motility in 3D/4D in vivo multiphoton #imaging data. It is specifically designed for reproducible, batch-scale analysis.
The paper describes the methodology, implementation, and scope of the software:
📄 https://doi.org/10.21105/joss.09267
💻 https://github.com/FabrizioMusacchio/MotilA
📘 https://motila.readthedocs.io/ -
Happy to announce that our #JOSS paper on #MotilA is now published 😊
MotilA is an #OpenSource #Python pipeline for quantifying microglial fine-process motility in 3D/4D in vivo multiphoton #imaging data. It is specifically designed for reproducible, batch-scale analysis.
The paper describes the methodology, implementation, and scope of the software:
📄 https://doi.org/10.21105/joss.09267
💻 https://github.com/FabrizioMusacchio/MotilA
📘 https://motila.readthedocs.io/ -
Happy to announce that our #JOSS paper on #MotilA is now published 😊
MotilA is an #OpenSource #Python pipeline for quantifying microglial fine-process motility in 3D/4D in vivo multiphoton #imaging data. It is specifically designed for reproducible, batch-scale analysis.
The paper describes the methodology, implementation, and scope of the software:
📄 https://doi.org/10.21105/joss.09267
💻 https://github.com/FabrizioMusacchio/MotilA
📘 https://motila.readthedocs.io/ -
Happy to announce that our #JOSS paper on #MotilA is now published 😊
MotilA is an #OpenSource #Python pipeline for quantifying microglial fine-process motility in 3D/4D in vivo multiphoton #imaging data. It is specifically designed for reproducible, batch-scale analysis.
The paper describes the methodology, implementation, and scope of the software:
📄 https://doi.org/10.21105/joss.09267
💻 https://github.com/FabrizioMusacchio/MotilA
📘 https://motila.readthedocs.io/