#microarrays — Public Fediverse posts

https://www.europesays.com/ie/198966/ AlphaFold Database Structure Extractor: a web server and API to download AlphaFold structures using common protein accessions | BMC Bioinformatics #algorithms #AlphaFoldDB #APIToolkit #Bioinformatics #ComputationalBiology #ComputationalBiology/Bioinformatics #ComputerAppl.InLifeSciences #Éire #IE #Ireland #Microarrays #NCBI #OpenAccess #ProteinStructure #Science #StructuralGenomics #UniProt

https://www.europesays.com/ie/197384/ X chromosome inactivation across primary human tissues is mostly complete, with significant implications for genetic and clinical studies | BMC Genomics #AnimalGeneticsAndGenomics #ChromosomeX #DosageCompensation #Éire #Escape #GeneExpression #general #IE #Inactivation #Ireland #LifeSciences #Microarrays #MicrobialGeneticsAndGenomics #PlantGeneticsAndGenomics #Proteomics #Science

The whole-genome map of Astragalus mongholicus provides ideas for the synthesis of glutathione and flavonoid | BMC Genomics

Fu J, Wang Z, Huang L, Zheng S, Wang D, Chen S, et al. Review of the botanical…
#NewsBeep #News #Science #AnimalGeneticsandGenomics #CA #Canada #Flavonoid #general #Genomesequences #Glutathione #LifeSciences #Microarrays #MicrobialGeneticsandGenomics #nAstragalusMembranaceusvar.Mongholicusn #PlantGeneticsandGenomics #Proteomics
https://www.newsbeep.com/ca/303296/

https://www.europesays.com/ie/193912/ Comparative genomics and transcriptomics of the Spiroplasma glossinidia strain sGff reveal insights into host interaction and trypanosome resistance in Glossina fuscipes fuscipes | BMC Genomics #AnimalGeneticsAndGenomics #Éire #general #GlossinaFuscipesFuscipes #IE #Ireland #LifeSciences #Microarrays #MicrobialGeneticsAndGenomics #PlantGeneticsAndGenomics #Proteomics #Science #Spiroplasma #SpiroplasmaGlossinidia #Symbiosis #Tsetse

https://www.europesays.com/ie/186522/ Genomic evolution and stability of the mcr-1-harboring IncI2 plasmid in the presence and absence of colistin | BMC Genomics #AnimalGeneticsAndGenomics #BacterialFitness #ColistinResistance #Éire #ExperimentalEvolution #general #Health #IE #IncI2Plasmid #Ireland #LifeSciences #Microarrays #MicrobialGeneticsAndGenomics #NMcr1n #PlantGeneticsAndGenomics #PlasmidConjugation #PlasmidStability #Proteomics

https://www.europesays.com/ie/185801/ Unexplored diversity and molecular genetic signatures of chimallin and phuz encoding phages | BMC Genomics #AnimalGeneticsAndGenomics #AntiDefenseSystem #Earth’sEcosystems #Éire #general #IE #Ireland #LifeSciences #Microarrays #MicrobialGeneticsAndGenomics #NucleusFormingPhages #PlantGeneticsAndGenomics #ProteinNucleusShell #Proteomics #Science

https://www.europesays.com/ie/181788/ Genomic differentiation between wild and domesticated populations of large yellow croaker (Larimichthys crocea): environmental impacts | BMC Genomics #AnimalGeneticsAndGenomics #Aquaculture #Éire #EnvironmentalAssociationAnalysis #general #GeneticDifferentiation #IE #Ireland #LarimichthysCrocea #LifeSciences #Microarrays #MicrobialGeneticsAndGenomics #PlantGeneticsAndGenomics #PopulationGenomics #Proteomics #Science #WholeGenomeResequencing

https://www.europesays.com/ie/181301/ Integrated transcriptomic and proteomic analysis reveals molecular mechanisms of melatonin-regulated hair follicle growth in cashmere goats and comparative insights across goat breeds | BMC Genomics #AnimalGeneticsAndGenomics #CashmereGoat #Éire #general #HairFollicleGrowthCycle #IE #Ireland #LifeSciences #melatonin #Microarrays #MicrobialGeneticsAndGenomics #PlantGeneticsAndGenomics #Proteome #Proteomics #Science #SecondaryHairFollicle #SignalingPathway #Transcriptome

https://www.europesays.com/ie/176064/ Integrating transcriptome and metabolome reveals sex-dependent meat quality regulation in Qiandongnan Xiaoxiang chickens | BMC Genomics #AnimalGeneticsAndGenomics #Éire #general #Health #HistidineMetabolism #IE #Ireland #LifeSciences #MeatQuality #Metabolome #Microarrays #MicrobialGeneticsAndGenomics #NicotinateMetabolism #PlantGeneticsAndGenomics #Proteomics #QiandongnanXiaoxiangChicken #Transcriptome

https://www.europesays.com/ie/164225/ Reconstruction and application of a genome-scale metabolic model for Streptococcus suis | BMC Genomics #AnimalGeneticsAndGenomics #AntimicrobialTargets #Éire #general #Health #IE #Ireland #LifeSciences #Microarrays #MicrobialGeneticsAndGenomics #NStreptococcusSuisn #PlantGeneticsAndGenomics #Proteomics #VirulenceFactor

https://www.europesays.com/ie/149631/ Prophage landscape in Enterococcus faecium: diversity, resistance genes, virulence factors, and endolysin profiling | BMC Genomics #AnimalGeneticsAndGenomics #AntimicrobialResistanceGenes #Éire #Endolysin #general #IE #Ireland #LifeSciences #Microarrays #MicrobialGeneticsAndGenomics #NEnterococcusFaeciumn #PlantGeneticsAndGenomics #Prophages #Proteomics #Science #VirulenceFactors

https://www.europesays.com/uk/511467/ FT-like genes in Cannabis and hops: sex specific expression and copy-number variation may explain flowering time variation | BMC Genomics #adaptation #AnimalGeneticsAndGenomics #Cannabaceae #FloweringTime #general #Genetics #LifeSciences #microarrays #MicrobialGeneticsAndGenomics #NCannabisSativan #NHumulusLupulusn #PEBP #phylogenetics #PlantGeneticsAndGenomics #proteomics #RNASeq #Science #SubFunctionalisation #UK #UnitedKingdom

https://www.europesays.com/uk/498959/ SAGPEK: fast and flexible approach to identify genotypes of Sanger sequencing data | BMC Bioinformatics #algorithms #AnimalMolecularBreeding #Bioinformatics #ComputationalBiology/Bioinformatics #ComputerAppl.InLifeSciences #DrugResistanceMutation #Genetics #microarrays #MolecularDiagnostics #SangerSequencing #Science #UK #UnitedKingdom

SAGPEK: fast and flexible approach to identify genotypes of Sanger sequencing data | BMC Bioinformatics

Software architecture SAGPEK mainly processes Sanger sequencing results of two kinds of samples: diploids su…
#NewsBeep #News #Genetics #algorithms #Animalmolecularbreeding #bioinformatics #ComputationalBiology/Bioinformatics #ComputerAppl.inLifeSciences #Drugresistancemutation #Microarrays #Moleculardiagnostics #Sangersequencing #Science #UK #UnitedKingdom
https://www.newsbeep.com/uk/199478/

SAGPEK: fast and flexible approach to identify genotypes of Sanger sequencing data | BMC Bioinformatics

Software architecture SAGPEK mainly processes Sanger sequencing results of two kinds of samples: diploids such a…
#NewsBeep #News #Genetics #algorithms #Animalmolecularbreeding #AU #Australia #bioinformatics #ComputationalBiology/Bioinformatics #ComputerAppl.inLifeSciences #Drugresistancemutation #Microarrays #MolecularDiagnostics #Sangersequencing #Science
https://www.newsbeep.com/au/212761/

Exploring the genetic basis of heterosis in eucalypt growth based on transcriptome analysis | BMC Genomics

Preparation of preliminary data In all samples, the proportion of clean reads was higher than 99.5% (Table S2),…
#NewsBeep #News #Genetics #AnimalGeneticsandGenomics #AU #Australia #Enrichmentanalysis #Eucalypthybrid #general #Heterosis #LifeSciences #Microarrays #MicrobialGeneticsandGenomics #PlantGeneticsandGenomics #Proteomics #Science #WGCNA
https://www.newsbeep.com/au/187077/

Exploring the genetic basis of heterosis in eucalypt growth based on transcriptome analysis | BMC Genomics

Preparation of preliminary data In all samples, the proportion of clean reads was higher …
#NewsBeep #News #US #USA #UnitedStates #UnitedStatesOfAmerica #Genetics #AnimalGeneticsandGenomics #Enrichmentanalysis #Eucalypthybrid #general #Heterosis #LifeSciences #Microarrays #MicrobialGeneticsandGenomics #PlantGeneticsandGenomics #Proteomics #Science #WGCNA
https://www.newsbeep.com/us/199059/

Exploring the genetic basis of heterosis in eucalypt growth based on transcriptome analysis | BMC Genomics

Preparation of preliminary data In all samples, the proportion of clean reads was higher …
#NewsBeep #News #US #USA #UnitedStates #UnitedStatesOfAmerica #Genetics #AnimalGeneticsandGenomics #Enrichmentanalysis #Eucalypthybrid #general #Heterosis #LifeSciences #Microarrays #MicrobialGeneticsandGenomics #PlantGeneticsandGenomics #Proteomics #Science #WGCNA
https://www.newsbeep.com/us/199059/

https://www.europesays.com/uk/470550/ Exploring the genetic basis of heterosis in eucalypt growth based on transcriptome analysis | BMC Genomics #AnimalGeneticsAndGenomics #EnrichmentAnalysis #EucalyptHybrid #general #Genetics #Heterosis #LifeSciences #microarrays #MicrobialGeneticsAndGenomics #PlantGeneticsAndGenomics #proteomics #Science #UK #UnitedKingdom #WGCNA

Exploring the genetic basis of heterosis in eucalypt growth based on transcriptome analysis | BMC Genomics

Preparation of preliminary data In all samples, the proportion of clean reads was higher than 99.5% (Table S2),…
#NewsBeep #News #Genetics #AnimalGeneticsandGenomics #Enrichmentanalysis #Eucalypthybrid #general #Heterosis #LifeSciences #Microarrays #MicrobialGeneticsandGenomics #PlantGeneticsandGenomics #proteomics #Science #UK #UnitedKingdom #WGCNA
https://www.newsbeep.com/uk/176969/

Mapping genes for resilient dairy cows by means of across-breed genome-wide association analysis | BMC Genomics

Data processing and evaluation as well as statistica…
#NewsBeep #News #US #USA #UnitedStates #UnitedStatesOfAmerica #Genetics #AnimalGeneticsandGenomics #Autocorrelation #Dairycattle #general #GWAS #LifeSciences #LinkageDisequilibrium #MDS #Microarrays #MicrobialGeneticsandGenomics #PlantGeneticsandGenomics #Proteomics #resilience #Science #Variance
https://www.newsbeep.com/us/193938/

Mapping genes for resilient dairy cows by means of across-breed genome-wide association analysis | BMC Genomics

Data processing and evaluation as well as statistica…
#NewsBeep #News #US #USA #UnitedStates #UnitedStatesOfAmerica #Genetics #AnimalGeneticsandGenomics #Autocorrelation #Dairycattle #general #GWAS #LifeSciences #LinkageDisequilibrium #MDS #Microarrays #MicrobialGeneticsandGenomics #PlantGeneticsandGenomics #Proteomics #resilience #Science #Variance
https://www.newsbeep.com/us/193938/

Differential cold stress intensities drive unique morphological and transcriptomic changes in Zea mays root hairs | BMC Genomics

Kennett DJ, Prufer KM, Culleton BJ, George RJ, Robinson M, et al. Early isotopic evidence for maize …
#NewsBeep #News #Science #Abioticstress #AnimalGeneticsandGenomics #AU #Australia #Cold #general #LifeSciences #Maize #Microarrays #MicrobialGeneticsandGenomics #PlantGeneticsandGenomics #Proteomics #RNA-seq #Roothair #Transcriptome
https://www.newsbeep.com/au/160588/

Investigating the role of transposable elements in shaping abdominal fat and egg production phenotypic traits in geese | BMC Genomics

Shi X, Wang J, Zeng F, Qiu X. Mitochondrial DNA cleavage patterns…
#NewsBeep #News #Genetics #Abdominalfat #AnimalGeneticsandGenomics #AU #Australia #general #Goose #GWAS #LifeSciences #Microarrays #MicrobialGeneticsandGenomics #nCDCC171n #Ovariantranscriptome #PlantGeneticsandGenomics #Proteomics #Science #transposableelements
https://www.newsbeep.com/au/115654/

GeneRiskCalc: a web-based tool for genetic risk association analysis in case–control studies | BMC Bioinformatics

Hardy–Weinberg equilibrium The HWE is a key principle in population genet…
#NewsBeep #News #Genetics #algorithms #AU #Australia #bioinformatics #Case–controlstudies #ComputationalBiology/Bioinformatics #ComputerAppl.inLifeSciences #Forestplot #Geneticassociationstudies #Geneticepidemiology #Hardy–Weinbergequilibrium #Microarrays #Oddsratio #Science
https://www.newsbeep.com/au/80938/

GeneRiskCalc: a web-based tool for genetic risk association analysis in case–control studies | BMC Bioinformatics

Hardy–Weinberg equilibrium The HWE is a key principle in population genetics…
#NewsBeep #News #Genetics #algorithms #bioinformatics #CA #Canada #Case–controlstudies #ComputationalBiology/Bioinformatics #ComputerAppl.inLifeSciences #Forestplot #Geneticassociationstudies #Geneticepidemiology #Hardy–Weinbergequilibrium #Microarrays #Oddsratio #Science
https://www.newsbeep.com/ca/82171/

https://www.europesays.com/uk/357561/ GeneRiskCalc: a web-based tool for genetic risk association analysis in case–control studies | BMC Bioinformatics #algorithms #Bioinformatics #Case–controlStudies #ComputationalBiology/Bioinformatics #ComputerAppl.InLifeSciences #ForestPlot #GeneticAssociationStudies #GeneticEpidemiology #Genetics #Hardy–WeinbergEquilibrium #microarrays #OddsRatio #Science #UK #UnitedKingdom

GenMasterTable: a user-friendly desktop application for filtering, summarising, and visualising large-scale annotated genetic variants | BMC Bioinformatics

GenMasterTab…
#NewsBeep #News #Genetics #algorithms #bioinformatics #Cohort-levelanalysis #ComputationalBiology/Bioinformatics #ComputerAppl.inLifeSciences #Desktopbioinformaticstool #Geneticvariantanalysis #Graphicaluserinterface(GUI) #Microarrays #Next-generationsequencing(NGS) #Science #UK #UnitedKingdom
https://www.newsbeep.com/uk/63465/

GenMasterTable: a user-friendly desktop application for filtering, summarising, and visualising large-scale annotated genetic variants | BMC Bioinformatics

GenMasterTable i…
#NewsBeep #News #Genetics #algorithms #AU #Australia #bioinformatics #Cohort-levelanalysis #ComputationalBiology/Bioinformatics #ComputerAppl.inLifeSciences #Desktopbioinformaticstool #Geneticvariantanalysis #Graphicaluserinterface(GUI) #Microarrays #Next-generationsequencing(NGS) #Science
https://www.newsbeep.com/au/64494/

Virtual karyotype (Genetics 🧬)

Virtual karyotype is the digital information reflecting a karyotype, resulting from the analysis of short sequences of DNA from specific loci all over the genome, which are isolated and enumerated. It detects genomic copy number variations at a higher resolution for level than conventional karyotyping or chromosome-based comparative genomic hybridization. The m...

https://en.wikipedia.org/wiki/Virtual_karyotype

#VirtualKaryotype #Genetics #Oncology #Microarrays

Mit rotierenden #Microarrays will das österreichische #Biotech-#Startup Cube Dx den #Diagnostik-Markt aufmischen. Ein Ziel, an dem dessen Gründer allerdings schon einmal gescheitert sind. — @realtobiasludwig erzählt, was sie diesmal besser machen (wollen): 👉 https://www.laborjournal.de/editorials/2715.php

#IDKWNTHT *

but, 20 years ago, #microarrays were a big deal for #dna #biology #genomics #drugs

And I went to the facility for GSK, one of the largest pharma companies in the world, where they had some arrayers running**

anyway, humidity issues, so the vendor solved it with I swear this is true, a pan of water with a hamster wheel run by an electric motor

*I don't know who needs to hear this

**kids, believe it or not, there was a period when people spotted their own arrays onto slides

Did you know you can retrieve annotation and gene expression data from #Bgee and perform #TopAnat analyses in #BioContainers? It's the fashionable way to access curated #GeneExpression 😎
https://biocontainers.pro/tools/bioconductor-bgeedb
#BioConda #Singularity #Docker #bioinformatics #biocuration #RNAseq #microarrays #UberAnat #SIB