#mathbio — Public Fediverse posts
Live and recent posts from across the Fediverse tagged #mathbio, aggregated by home.social.
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Great plenary for this morning at @smbmathbiology.bsky.social by former SMB president and legendary #mathbio person Fred Adler. Burocracy as the way our body tries to stop cancer
#SMB2025 -
Great plenary for this morning at @smbmathbiology.bsky.social by former SMB president and legendary #mathbio person Fred Adler. Burocracy as the way our body tries to stop cancer
#SMB2025 -
Great interview of @dbcooney by @pbiwan for the Society of Mathematical Biology's podcast #BiologyInNumbers. I love hearing about people using #EvolutionaryGameTheory in #MathBio !
https://play.pocketcasts.com/podcasts/d431ebf0-fd91-013b-f558-0acc26574db2/9aacc4ac-40a7-4ce8-8b00-18529e5aa385 -
Great interview of @dbcooney by @pbiwan for the Society of Mathematical Biology's podcast #BiologyInNumbers. I love hearing about people using #EvolutionaryGameTheory in #MathBio !
https://play.pocketcasts.com/podcasts/d431ebf0-fd91-013b-f558-0acc26574db2/9aacc4ac-40a7-4ce8-8b00-18529e5aa385 -
Book: Mathematics in Biology, by Markus Meister, Kyu Hyun Lee, and Ruben Portugues.
http://www.mathinbio.com/@mameister4 has a blog entry on why they decided to write the book:
https://markusmeister.com/2025/02/20/why-we-wrote-a-math-book-for-biologists/Interestingly:
• The web site offers value-added materials, for example sample curricula, and the code for generating every figure in the book.
• The book contains many exercises, but no solutions. We invite student readers to produce such solutions and we will publish the best ones on this site with author credit.Looks like a long-running project to support and engage the broader community – and it's been 12 years in the making!
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Book: Mathematics in Biology, by Markus Meister, Kyu Hyun Lee, and Ruben Portugues.
http://www.mathinbio.com/@mameister4 has a blog entry on why they decided to write the book:
https://markusmeister.com/2025/02/20/why-we-wrote-a-math-book-for-biologists/Interestingly:
• The web site offers value-added materials, for example sample curricula, and the code for generating every figure in the book.
• The book contains many exercises, but no solutions. We invite student readers to produce such solutions and we will publish the best ones on this site with author credit.Looks like a long-running project to support and engage the broader community – and it's been 12 years in the making!
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Postdoc in computational genomics - Farabella Lab
Istituto Italiano di Tecnologia
????JOB OPENING????
We are hiring #postdoc #compbio #MathBio #bioinfo!For more info, feel free to DM or visit https://farabellalab.org.
See the full job description on jobRxiv: https://jobrxiv.org/job/istituto-italiano-di-tecnologia-27778-postdoc-in-computational-genomics-farabella-...
https://jobrxiv.org/job/istituto-italiano-di-tecnologia-27778-postdoc-in-computational-genomics-farabella-lab/?feed_id=84618 -
Postdoc in computational genomics - Farabella Lab
Istituto Italiano di Tecnologia
????JOB OPENING????
We are hiring #postdoc #compbio #MathBio #bioinfo!For more info, feel free to DM or visit https://farabellalab.org.
See the full job description on jobRxiv: https://jobrxiv.org/job/istituto-italiano-di-tecnologia-27778-postdoc-in-computational-genomics-farabella-...
https://jobrxiv.org/job/istituto-italiano-di-tecnologia-27778-postdoc-in-computational-genomics-farabella-lab/?feed_id=84618 -
Postdoc in computational genomics - Farabella Lab
Istituto Italiano di Tecnologia
????JOB OPENING????
We are hiring #postdoc #compbio #MathBio #bioinfo!For more info, feel free to DM or visit https://farabellalab.org.
See the full job description on jobRxiv: https://jobrxiv.org/job/istituto-italiano-di-tecnologia-27778-postdoc-in-computational-genomics-farabella-...
https://jobrxiv.org/job/istituto-italiano-di-tecnologia-27778-postdoc-in-computational-genomics-farabella-lab/?feed_id=81808 -
Postdoc in computational genomics - Farabella Lab
Istituto Italiano di Tecnologia
????JOB OPENING????
We are hiring #postdoc #compbio #MathBio #bioinfo!For more info, feel free to DM or visit https://farabellalab.org.
See the full job description on jobRxiv: https://jobrxiv.org/job/istituto-italiano-di-tecnologia-27778-postdoc-in-computational-genomics-farabella-...
https://jobrxiv.org/job/istituto-italiano-di-tecnologia-27778-postdoc-in-computational-genomics-farabella-lab/?feed_id=81808 -
Postdoc in computational genomics - Farabella Lab
Istituto Italiano di Tecnologia
????JOB OPENING????
We are hiring #postdoc #compbio #MathBio #bioinfo!For more info, feel free to DM or visit https://farabellalab.org.
See the full job description on jobRxiv: https://jobrxiv.org/job/istituto-italiano-di-tecnologia-27778-postdoc-in-computational-genomics-farabella-...
https://jobrxiv.org/job/istituto-italiano-di-tecnologia-27778-postdoc-in-computational-genomics-farabella-lab/?feed_id=78266 -
Postdoc in computational genomics - Farabella Lab
Istituto Italiano di Tecnologia
????JOB OPENING????
We are hiring #postdoc #compbio #MathBio #bioinfo!For more info, feel free to DM or visit https://farabellalab.org.
See the full job description on jobRxiv: https://jobrxiv.org/job/istituto-italiano-di-tecnologia-27778-postdoc-in-computational-genomics-farabella-...
https://jobrxiv.org/job/istituto-italiano-di-tecnologia-27778-postdoc-in-computational-genomics-farabella-lab/?feed_id=78266 -
Postdoc in computational genomics - Farabella Lab
Istituto Italiano di Tecnologia
????JOB OPENING????
We are hiring #postdoc #compbio #MathBio #bioinfo!For more info, feel free to DM or visit https://farabellalab.org.
See the full job description on jobRxiv: https://jobrxiv.org/job/istituto-italiano-di-tecnologia-27778-postdoc-in-computational-genomics-farabella-...
https://jobrxiv.org/job/istituto-italiano-di-tecnologia-27778-postdoc-in-computational-genomics-farabella-lab/?feed_id=77188 -
Postdoc in computational genomics - Farabella Lab
Istituto Italiano di Tecnologia
????JOB OPENING????
We are hiring #postdoc #compbio #MathBio #bioinfo!For more info, feel free to DM or visit https://farabellalab.org.
See the full job description on jobRxiv: https://jobrxiv.org/job/istituto-italiano-di-tecnologia-27778-postdoc-in-computational-genomics-farabella-...
https://jobrxiv.org/job/istituto-italiano-di-tecnologia-27778-postdoc-in-computational-genomics-farabella-lab/?feed_id=77188 -
I love talking to nerds about their passion projects, so this series as been a lot of fun to put together. Thank you to Heiko Enderling for thinking of me to produce SMB's Biology in Numbers, and to Jane Heffernan for keeping me on to create season 2!
If you haven't already listened, you can find it on all major podcast platforms.In the meanwhile, here's a quick video of what we talked about in season 1
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I love talking to nerds about their passion projects, so this series as been a lot of fun to put together. Thank you to Heiko Enderling for thinking of me to produce SMB's Biology in Numbers, and to Jane Heffernan for keeping me on to create season 2!
If you haven't already listened, you can find it on all major podcast platforms.In the meanwhile, here's a quick video of what we talked about in season 1
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Postdoctoral Position in Mathematical and Computational Biology/Biophysics
J. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences
Hiring a #MathBio / #CompBio / #Biophysics / #AppliedMath postdoctoral fellow to work on #enzyme assembly modeling @JHINST_Prague!
See the full job descri...
https://jobrxiv.org/job/j-heyrovsky-institute-of-physical-chemistry-czech-academy-of-sciences-27778-postdoctoral-position-in-mathematical-and-computational-biology-biophysics-2/?feed_id=75011 -
Postdoctoral Position in Mathematical and Computational Biology/Biophysics
J. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences
Hiring a #MathBio / #CompBio / #Biophysics / #AppliedMath postdoctoral fellow to work on #enzyme assembly modeling @JHINST_Prague!
See the full job descri...
https://jobrxiv.org/job/j-heyrovsky-institute-of-physical-chemistry-czech-academy-of-sciences-27778-postdoctoral-position-in-mathematical-and-computational-biology-biophysics-2/?feed_id=75011 -
Postdoctoral Position in Mathematical and Computational Biology/Biophysics
J. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences
Hiring a #MathBio / #CompBio / #Biophysics / #AppliedMath postdoctoral fellow to work on #enzyme assembly modeling @JHINST_Prague!
See the full job descri...
https://jobrxiv.org/job/j-heyrovsky-institute-of-physical-chemistry-czech-academy-of-sciences-27778-postdoctoral-position-in-mathematical-and-computational-biology-biophysics-2/?feed_id=74822 -
Postdoctoral Position in Mathematical and Computational Biology/Biophysics
J. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences
Hiring a #MathBio / #CompBio / #Biophysics / #AppliedMath postdoctoral fellow to work on #enzyme assembly modeling @JHINST_Prague!
See the full job descri...
https://jobrxiv.org/job/j-heyrovsky-institute-of-physical-chemistry-czech-academy-of-sciences-27778-postdoctoral-position-in-mathematical-and-computational-biology-biophysics-2/?feed_id=74822 -
Postdoctoral Position in Mathematical and Computational Biology/Biophysics
J. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences
Hiring a #MathBio / #CompBio / #Biophysics / #AppliedMath postdoctoral fellow to work on #enzyme assembly modeling @JHINST_Prague!
See the full job descri...
https://jobrxiv.org/job/j-heyrovsky-institute-of-physical-chemistry-czech-academy-of-sciences-27778-postdoctoral-position-in-mathematical-and-computational-biology-biophysics-2/?feed_id=74367 -
Postdoctoral Position in Mathematical and Computational Biology/Biophysics
J. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences
Hiring a #MathBio / #CompBio / #Biophysics / #AppliedMath postdoctoral fellow to work on #enzyme assembly modeling @JHINST_Prague!
See the full job descri...
https://jobrxiv.org/job/j-heyrovsky-institute-of-physical-chemistry-czech-academy-of-sciences-27778-postdoctoral-position-in-mathematical-and-computational-biology-biophysics-2/?feed_id=74367 -
Postdoctoral Position in Mathematical and Computational Biology/Biophysics
J. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences
Hiring a #MathBio / #CompBio / #Biophysics / #AppliedMath postdoctoral fellow to work on #enzyme assembly modeling @JHINST_Prague!
See the full job descript...
https://jobrxiv.org/job/j-heyrovsky-institute-of-physical-chemistry-czech-academy-of-sciences-27778-postdoctoral-position-in-mathematical-and-computational-biology-biophysics/?feed_id=70846 -
Postdoctoral Position in Mathematical and Computational Biology/Biophysics
J. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences
Hiring a #MathBio / #CompBio / #Biophysics / #AppliedMath postdoctoral fellow to work on #enzyme assembly modeling @JHINST_Prague!
See the full job descript...
https://jobrxiv.org/job/j-heyrovsky-institute-of-physical-chemistry-czech-academy-of-sciences-27778-postdoctoral-position-in-mathematical-and-computational-biology-biophysics/?feed_id=70846 -
Postdoctoral Position in Mathematical and Computational Biology/Biophysics
J. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences
Hiring a #MathBio / #CompBio / #Biophysics / #AppliedMath postdoctoral fellow to work on #enzyme assembly modeling @JHINST_Prague!
See the full job descript...
https://jobrxiv.org/job/j-heyrovsky-institute-of-physical-chemistry-czech-academy-of-sciences-27778-postdoctoral-position-in-mathematical-and-computational-biology-biophysics/?feed_id=69223 -
Postdoctoral Position in Mathematical and Computational Biology/Biophysics
J. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences
Hiring a #MathBio / #CompBio / #Biophysics / #AppliedMath postdoctoral fellow to work on #enzyme assembly modeling @JHINST_Prague!
See the full job descript...
https://jobrxiv.org/job/j-heyrovsky-institute-of-physical-chemistry-czech-academy-of-sciences-27778-postdoctoral-position-in-mathematical-and-computational-biology-biophysics/?feed_id=69223 -
Postdoctoral Position in Mathematical and Computational Biology/Biophysics
J. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences
Hiring a #MathBio / #CompBio / #Biophysics / #AppliedMath postdoctoral fellow to work on #enzyme assembly modeling @JHINST_Prague!
See the full job descript...
https://jobrxiv.org/job/j-heyrovsky-institute-of-physical-chemistry-czech-academy-of-sciences-27778-postdoctoral-position-in-mathematical-and-computational-biology-biophysics/?feed_id=69216 -
Postdoctoral Position in Mathematical and Computational Biology/Biophysics
J. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences
Hiring a #MathBio / #CompBio / #Biophysics / #AppliedMath postdoctoral fellow to work on #enzyme assembly modeling @JHINST_Prague!
See the full job descript...
https://jobrxiv.org/job/j-heyrovsky-institute-of-physical-chemistry-czech-academy-of-sciences-27778-postdoctoral-position-in-mathematical-and-computational-biology-biophysics/?feed_id=69216 -
Loved this Society for Mathematical Biology podcast with #UtahUniversity Elijah Counterman using #MathOnco to study the impact of non-adherence which is what happens when treatment is delivered at times that were not the ones the #oncologist planned for:
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Loved this Society for Mathematical Biology podcast with #UtahUniversity Elijah Counterman using #MathOnco to study the impact of non-adherence which is what happens when treatment is delivered at times that were not the ones the #oncologist planned for:
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@robinsall Also, for what is worth, here is a Quanta Magazine article by Robert:
https://www.quantamagazine.org/cells-blaze-their-own-trails-to-navigate-through-the-body-20220328/ -
@robinsall Also, for what is worth, here is a Quanta Magazine article by Robert:
https://www.quantamagazine.org/cells-blaze-their-own-trails-to-navigate-through-the-body-20220328/ -
Computational Biology Postdoctoral Fellow @hongtian162
Come join us @BCMB_UTK @NIMBioS as a #compbio / #bioinformatics / #MathBio postdoctoral fellow!
#ScienceJobs #job
Knoxville #UnitedStatesUS #Bioinformatician #Postdoc...
https://jobrxiv.org/job/the-university-of-tennessee-knoxville-27778-computational-biology-postdoctoral-fellow/?feed_id=39024 -
Computational Biology Postdoctoral Fellow @hongtian162
Come join us @BCMB_UTK @NIMBioS as a #compbio / #bioinformatics / #MathBio postdoctoral fellow!
#ScienceJobs #job
Knoxville #UnitedStatesUS #Bioinformatician #Postdoc...
https://jobrxiv.org/job/the-university-of-tennessee-knoxville-27778-computational-biology-postdoctoral-fellow/?feed_id=39024 -
Computational Biology Postdoctoral Fellow @hongtian162
Come join us @BCMB_UTK @NIMBioS as a #compbio / #bioinformatics / #MathBio postdoctoral fellow!
#ScienceJobs #job
Knoxville #UnitedStatesUS #Bioinformatician #Postdoc...
https://jobrxiv.org/job/the-university-of-tennessee-knoxville-27778-computational-biology-postdoctoral-fellow/?feed_id=37934 -
Computational Biology Postdoctoral Fellow @hongtian162
Come join us @BCMB_UTK @NIMBioS as a #compbio / #bioinformatics / #MathBio postdoctoral fellow!
#ScienceJobs #job
Knoxville #UnitedStatesUS #Bioinformatician #Postdoc...
https://jobrxiv.org/job/the-university-of-tennessee-knoxville-27778-computational-biology-postdoctoral-fellow/?feed_id=37934 -
A newbie question on Julia:
Converted a large MC code set in Julia from C. It is a one-to-one mapping from my previous C code, except few vectorizations.
It uses only one library- Random, for rand().
The Julia code is terribly slower than the C code.
Can someone please throw some pointers on this problem?
#Julia #JuliaLanguage #programming #mathbio #computationalbiology
#dynamicalsystems
#statisticalPhysics -
"The Lost Art of Mathematical Modelling" by Gyllingberg, L., @abebab, & Sumpter, D. J. T.
http://arxiv.org/abs/2301.08559 -
"The Lost Art of Mathematical Modelling" by Gyllingberg, L., @abebab, & Sumpter, D. J. T.
http://arxiv.org/abs/2301.08559 -
New paper: How development affects evolution @journal_evo
https://academic.oup.com/evolut/advance-article/doi/10.1093/evolut/qpac003/6955321
#evolution #development #evodevo #Gmatrix #mathbio #plasticity #developmentalbias #nicheconstruction #extrageneticinheritance #senescence #ageing #evolutionarydynamics #adaptivedynamics #fitnesslandscape
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"Mathematics Is Biology's Next Microscope ... " -by Joel E. Cohen
This is an old paper, but it provides lots of food for thought.
For example, it boldly states, "In the coming century, biology will stimulate the creation of entirely new realms of mathematics."
It also lists a few of the mathematical developments arising out of biology.
What are your thoughts on the central idea - biology-inspired /driven mathematics?
#mathbio #mathematics #theoreticalbiology
https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.0020439
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Saw this quote in this week's MathOnco newsletter, and wanted to share it:
“....genes are like the keys on a piano: although they are essential, it is the context that makes the music.”
— C. Nelson, M. BissellIf you are interested in mathematical oncology, MathOnco is a great weekly curated resource w links to the latest papers/preprints, upcoming events, and my fave---the featured artwork of the week. Check it out:
https://thisweekmathonco.substack.com/p/this-week-in-mathonco-235 -
@NadiaHalidi I am also slowly finding the #bioimaging #mathbio crowd here. It is a pleasant space for science and math, to be sure!
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Suggest a few good examples from mathematical and theoretical biology that can help to convince an uninitiated biologist that theory and mathematical models matter in Biology.
I need a few examples for a general talk to a broader audience of "experimental biologists."
#qBio #mathbio
#QuantitativeBiology
#theoreticalbiology
#ScienceMastodon -
So excited to see the active #PhysiCell community!
This #preprint #mathbio stems from our 2021 workshop and hacakthon. Inês Gonçalves, David Hormuth II, Sandhya Prabhakaran, and Caleb M. Phillips They made an extension for calibrating and optimizing #AgentBasedModels written with PhysiCell.
Way to go!!! @biorxivpreprint