#computational-biology — Public Fediverse posts

A closed-loop artificial intelligence laboratory system capable of autonomously generating scientific hypotheses, designing and executing experiments, and analyzing the resulting biological data.
#SystemsBiology #ArtificialIntelligence #ComputationalBiology #Biotechnology #sflorg
https://www.sflorg.com/2026/09/bio09302601.html

A closed-loop artificial intelligence laboratory system capable of autonomously generating scientific hypotheses, designing and executing experiments, and analyzing the resulting biological data.
#SystemsBiology #ArtificialIntelligence #ComputationalBiology #Biotechnology #sflorg
https://www.sflorg.com/2026/09/bio09302601.html

A closed-loop artificial intelligence laboratory system capable of autonomously generating scientific hypotheses, designing and executing experiments, and analyzing the resulting biological data.
#SystemsBiology #ArtificialIntelligence #ComputationalBiology #Biotechnology #sflorg
https://www.sflorg.com/2026/09/bio09302601.html

A closed-loop artificial intelligence laboratory system capable of autonomously generating scientific hypotheses, designing and executing experiments, and analyzing the resulting biological data.
#SystemsBiology #ArtificialIntelligence #ComputationalBiology #Biotechnology #sflorg
https://www.sflorg.com/2026/09/bio09302601.html

Postdoctoral positions in Quantitative Biology
Stony Brook University

Come join us as a #ComputationalBiology postdoc decoding #GeneExpression noise with maths & ML at @stonybrooku!

See the full job description on jobRxiv: https://jobrxiv.org/job/stony-brook-university-27778-postdoctoral-positions-in-quantitative-biology/

#appliedmathematics #biomathematics #MonteCarlosimulat...
https://jobrxiv.org/job/stony-brook-university-27778-postdoctoral-positions-in-quantitative-biology/?fsp_sid=15750

Postdoctoral positions in Quantitative Biology
Stony Brook University

Come join us as a #ComputationalBiology postdoc decoding #GeneExpression noise with maths & ML at @stonybrooku!

See the full job description on jobRxiv: https://jobrxiv.org/job/stony-brook-university-27778-postdoctoral-positions-in-quantitative-biology/

#appliedmathematics #biomathematics #MonteCarlosimulat...
https://jobrxiv.org/job/stony-brook-university-27778-postdoctoral-positions-in-quantitative-biology/?fsp_sid=15750

Postdoctoral positions in Quantitative Biology
Stony Brook University

Come join us as a #ComputationalBiology postdoc decoding #GeneExpression noise with maths & ML at @stonybrooku!

See the full job description on jobRxiv: https://jobrxiv.org/job/stony-brook-university-27778-postdoctoral-positions-in-quantitative-biology/

#appliedmathematics #biomathematics #MonteCarlosimulat...
https://jobrxiv.org/job/stony-brook-university-27778-postdoctoral-positions-in-quantitative-biology/?fsp_sid=15750

Postdoctoral positions in Quantitative Biology
Stony Brook University

Come join us as a #ComputationalBiology postdoc decoding #GeneExpression noise with maths & ML at @stonybrooku!

See the full job description on jobRxiv: https://jobrxiv.org/job/stony-brook-university-27778-postdoctoral-positions-in-quantitative-biology/

#appliedmathematics #biomathematics #MonteCarlosimulat...
https://jobrxiv.org/job/stony-brook-university-27778-postdoctoral-positions-in-quantitative-biology/?fsp_sid=15750

🤖 Are protein language models overhyped without evolutionary context?

🔗 Evolutionary Constraints Improve Protein Large Language Model Predictions for Protein Stability, Binding Regions, and Epistasis. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0226

📚 CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#ProteinAI #ProteinScience #ProteinLanguageModels #Bioinformatics #ComputationalBiology #ArtificialIntelligence #EvolutionaryBiology

🤖 Are protein language models overhyped without evolutionary context?

🔗 Evolutionary Constraints Improve Protein Large Language Model Predictions for Protein Stability, Binding Regions, and Epistasis. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0226

📚 CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#ProteinAI #ProteinScience #ProteinLanguageModels #Bioinformatics #ComputationalBiology #ArtificialIntelligence #EvolutionaryBiology

🤖 Are protein language models overhyped without evolutionary context?

🔗 Evolutionary Constraints Improve Protein Large Language Model Predictions for Protein Stability, Binding Regions, and Epistasis. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0226

📚 CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#ProteinAI #ProteinScience #ProteinLanguageModels #Bioinformatics #ComputationalBiology #ArtificialIntelligence #EvolutionaryBiology

🤖 Are protein language models overhyped without evolutionary context?

🔗 Evolutionary Constraints Improve Protein Large Language Model Predictions for Protein Stability, Binding Regions, and Epistasis. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0226

📚 CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#ProteinAI #ProteinScience #ProteinLanguageModels #Bioinformatics #ComputationalBiology #ArtificialIntelligence #EvolutionaryBiology

A mechanism where populations of neurons compensate for individual unreliability by collectively representing the same information, challenging previous theories that shared noise limits information capacity.
#Neuroscience #ComputationalBiology #InformationTheory #sflorg
https://www.sflorg.com/2026/09/ns09282601.html

A mechanism where populations of neurons compensate for individual unreliability by collectively representing the same information, challenging previous theories that shared noise limits information capacity.
#Neuroscience #ComputationalBiology #InformationTheory #sflorg
https://www.sflorg.com/2026/09/ns09282601.html

A mechanism where populations of neurons compensate for individual unreliability by collectively representing the same information, challenging previous theories that shared noise limits information capacity.
#Neuroscience #ComputationalBiology #InformationTheory #sflorg
https://www.sflorg.com/2026/09/ns09282601.html

A mechanism where populations of neurons compensate for individual unreliability by collectively representing the same information, challenging previous theories that shared noise limits information capacity.
#Neuroscience #ComputationalBiology #InformationTheory #sflorg
https://www.sflorg.com/2026/09/ns09282601.html

🧬 Are we still designing siRNAs the old-fashioned way while AI already sees what we’re missing?

🔗 Leveraging Foundation Models for the Characterization of Small-RNA Properties. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0224

📚 CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#RNA #siRNA #RNAtherapeutics #Bioinformatics #ComputationalBiology #DrugDiscovery #MachineLearning #PrecisionMedicine #Genomics #ArtificialIntelligence #FoundationModels

🧬 Are we still designing siRNAs the old-fashioned way while AI already sees what we’re missing?

🔗 Leveraging Foundation Models for the Characterization of Small-RNA Properties. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0224

📚 CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#RNA #siRNA #RNAtherapeutics #Bioinformatics #ComputationalBiology #DrugDiscovery #MachineLearning #PrecisionMedicine #Genomics #ArtificialIntelligence #FoundationModels

🤖 What if protein classification errors begin before the AI even starts learning?

🔗 Vertex Assignment for Frequency Chaos Game Representation of Proteins Affects Classification Performance. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0225

📚 CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#Bioinformatics #MachineLearning #DeepLearning #Proteomics #ComputationalBiology #ProteinScience #ArtificialIntelligence

🤖 What if protein classification errors begin before the AI even starts learning?

🔗 Vertex Assignment for Frequency Chaos Game Representation of Proteins Affects Classification Performance. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0225

📚 CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#Bioinformatics #MachineLearning #DeepLearning #Proteomics #ComputationalBiology #ProteinScience #ArtificialIntelligence

Researchers have mapped the molecular activity underlying hypertrophic cardiomyopathy (HCM), a disease causing thickening and stiffening of the heart muscle.
#Cardiology #Genetics #MolecularBiology #ComputationalBiology #sflorg
https://www.sflorg.com/2026/09/med09182601.html

Researchers have mapped the molecular activity underlying hypertrophic cardiomyopathy (HCM), a disease causing thickening and stiffening of the heart muscle.
#Cardiology #Genetics #MolecularBiology #ComputationalBiology #sflorg
https://www.sflorg.com/2026/09/med09182601.html

Researchers have mapped the molecular activity underlying hypertrophic cardiomyopathy (HCM), a disease causing thickening and stiffening of the heart muscle.
#Cardiology #Genetics #MolecularBiology #ComputationalBiology #sflorg
https://www.sflorg.com/2026/09/med09182601.html

Researchers have mapped the molecular activity underlying hypertrophic cardiomyopathy (HCM), a disease causing thickening and stiffening of the heart muscle.
#Cardiology #Genetics #MolecularBiology #ComputationalBiology #sflorg
https://www.sflorg.com/2026/09/med09182601.html

Delphy is a web-based software application designed to rapidly assemble phylogenetic trees, mapping the evolution and spread of viral variants from genomic sequence data in near-real time.
#ComputationalBiology #Epidemiology #Genomics #Virology #sflorg
https://www.sflorg.com/2026/09/cobi09162601.html

Delphy is a web-based software application designed to rapidly assemble phylogenetic trees, mapping the evolution and spread of viral variants from genomic sequence data in near-real time.
#ComputationalBiology #Epidemiology #Genomics #Virology #sflorg
https://www.sflorg.com/2026/09/cobi09162601.html

Delphy is a web-based software application designed to rapidly assemble phylogenetic trees, mapping the evolution and spread of viral variants from genomic sequence data in near-real time.
#ComputationalBiology #Epidemiology #Genomics #Virology #sflorg
https://www.sflorg.com/2026/09/cobi09162601.html

Delphy is a web-based software application designed to rapidly assemble phylogenetic trees, mapping the evolution and spread of viral variants from genomic sequence data in near-real time.
#ComputationalBiology #Epidemiology #Genomics #Virology #sflorg
https://www.sflorg.com/2026/09/cobi09162601.html

If you are interested in how AI can support the development of scientific software, I invite you to attend my workshop at the 71st Annual Meeting of the Biophysical Society in Philadelphia.

On February 23, 2027, at 7:30 PM, I will present “Developing Scientific Software with AI: Opportunities, Practices, and Pitfalls for Biophysicists.”

I am grateful for the invitation and look forward to the discussion.

See you at #BPS2027 #Biophysics #AI #ComputationalBiology

If you are interested in how AI can support the development of scientific software, I invite you to attend my workshop at the 71st Annual Meeting of the Biophysical Society in Philadelphia.

On February 23, 2027, at 7:30 PM, I will present “Developing Scientific Software with AI: Opportunities, Practices, and Pitfalls for Biophysicists.”

I am grateful for the invitation and look forward to the discussion.

See you at #BPS2027 #Biophysics #AI #ComputationalBiology

If you are interested in how AI can support the development of scientific software, I invite you to attend my workshop at the 71st Annual Meeting of the Biophysical Society in Philadelphia.

On February 23, 2027, at 7:30 PM, I will present “Developing Scientific Software with AI: Opportunities, Practices, and Pitfalls for Biophysicists.”

I am grateful for the invitation and look forward to the discussion.

See you at #BPS2027 #Biophysics #AI #ComputationalBiology

If you are interested in how AI can support the development of scientific software, I invite you to attend my workshop at the 71st Annual Meeting of the Biophysical Society in Philadelphia.

On February 23, 2027, at 7:30 PM, I will present “Developing Scientific Software with AI: Opportunities, Practices, and Pitfalls for Biophysicists.”

I am grateful for the invitation and look forward to the discussion.

See you at #BPS2027 #Biophysics #AI #ComputationalBiology

Postdoctoral Scholar
University of Washington

See the full job description on jobRxiv: https://jobrxiv.org/job/university-of-washington-27778-postdoctoral-scholar-2/

#appliedmath #bayesian #computationalbiology #hematology #Laboratorymedicine #ScienceJobs #hiring #research
https://jobrxiv.org/job/university-of-washington-27778-postdoctoral-scholar-2/?fsp_sid=15291

Postdoctoral Scholar
University of Washington

See the full job description on jobRxiv: https://jobrxiv.org/job/university-of-washington-27778-postdoctoral-scholar-2/

#appliedmath #bayesian #computationalbiology #hematology #Laboratorymedicine #ScienceJobs #hiring #research
https://jobrxiv.org/job/university-of-washington-27778-postdoctoral-scholar-2/?fsp_sid=15291

Postdoctoral Scholar
University of Washington

See the full job description on jobRxiv: https://jobrxiv.org/job/university-of-washington-27778-postdoctoral-scholar-2/

#appliedmath #bayesian #computationalbiology #hematology #Laboratorymedicine #ScienceJobs #hiring #research
https://jobrxiv.org/job/university-of-washington-27778-postdoctoral-scholar-2/?fsp_sid=15291

Postdoctoral Scholar
University of Washington

See the full job description on jobRxiv: https://jobrxiv.org/job/university-of-washington-27778-postdoctoral-scholar-2/

#appliedmath #bayesian #computationalbiology #hematology #Laboratorymedicine #ScienceJobs #hiring #research
https://jobrxiv.org/job/university-of-washington-27778-postdoctoral-scholar-2/?fsp_sid=15291

RE: https://mastodon.social/@stamatak/117257754319931401

Great things are happening in the development of a core #bioinformatics and #computationalbiology tool!

RE: https://mastodon.social/@stamatak/117257754319931401

Great things are happening in the development of a core #bioinformatics and #computationalbiology tool!

Researchers have identified specific structural features in the spleen, visible on MRI scans, that are associated with an increased risk of coronary artery disease (CAD).
#Genetics #ComputationalBiology #ArtificialIntelligence (Machine Learning) #Radiology #sflorg
https://www.sflorg.com/2026/09/med09122601.html

Researchers have identified specific structural features in the spleen, visible on MRI scans, that are associated with an increased risk of coronary artery disease (CAD).
#Genetics #ComputationalBiology #ArtificialIntelligence (Machine Learning) #Radiology #sflorg
https://www.sflorg.com/2026/09/med09122601.html

Researchers have identified specific structural features in the spleen, visible on MRI scans, that are associated with an increased risk of coronary artery disease (CAD).
#Genetics #ComputationalBiology #ArtificialIntelligence (Machine Learning) #Radiology #sflorg
https://www.sflorg.com/2026/09/med09122601.html

Researchers have identified specific structural features in the spleen, visible on MRI scans, that are associated with an increased risk of coronary artery disease (CAD).
#Genetics #ComputationalBiology #ArtificialIntelligence (Machine Learning) #Radiology #sflorg
https://www.sflorg.com/2026/09/med09122601.html

rarelens: building a rare-disease variant triage platform, and the four things I got wrong

https://kemal.yaylali.uk/rarelens-technical-introduction/

rarelens: building a rare-disease variant triage platform, and the four things I got wrong

https://kemal.yaylali.uk/rarelens-technical-introduction/

rarelens: building a rare-disease variant triage platform, and the four things I got wrong

https://kemal.yaylali.uk/rarelens-technical-introduction/

rarelens: building a rare-disease variant triage platform, and the four things I got wrong

https://kemal.yaylali.uk/rarelens-technical-introduction/

Computational Biologist - Fully Remote
micro1

Computational Biologists (MSc or PhD) needed for fully remote contract work (up to $120/hour!). Ideally looking for experience in medicinal chemistry

See the full job description on jobRxiv: https://jobrxiv.org/job/micro1-27778-computational-biologist-fully-remote/

#bioinformatics #cheminformatics #computationalbiology #drugdiscovery #medicinalchemistry #S...
https://jobrxiv.org/job/micro1-27778-computational-biologist-fully-remote/?fsp_sid=15130

Computational Biologist - Fully Remote
micro1

Computational Biologists (MSc or PhD) needed for fully remote contract work (up to $120/hour!). Ideally looking for experience in medicinal chemistry

See the full job description on jobRxiv: https://jobrxiv.org/job/micro1-27778-computational-biologist-fully-remote/

#bioinformatics #cheminformatics #computationalbiology #drugdiscovery #medicinalchemistry #S...
https://jobrxiv.org/job/micro1-27778-computational-biologist-fully-remote/?fsp_sid=15130

Computational Biologist - Fully Remote
micro1

Computational Biologists (MSc or PhD) needed for fully remote contract work (up to $120/hour!). Ideally looking for experience in medicinal chemistry

See the full job description on jobRxiv: https://jobrxiv.org/job/micro1-27778-computational-biologist-fully-remote/

#bioinformatics #cheminformatics #computationalbiology #drugdiscovery #medicinalchemistry #S...
https://jobrxiv.org/job/micro1-27778-computational-biologist-fully-remote/?fsp_sid=15130

Computational Biologist - Fully Remote
micro1

Computational Biologists (MSc or PhD) needed for fully remote contract work (up to $120/hour!). Ideally looking for experience in medicinal chemistry

See the full job description on jobRxiv: https://jobrxiv.org/job/micro1-27778-computational-biologist-fully-remote/

#bioinformatics #cheminformatics #computationalbiology #drugdiscovery #medicinalchemistry #S...
https://jobrxiv.org/job/micro1-27778-computational-biologist-fully-remote/?fsp_sid=15130

🔬 What if a tumor sample could serve as its own reference?

🔗 Reference-Free Microsatellite Instability Detection from Tumor Sequencing Using Intrasample Variability Modeling. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0219

📚 CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#MicrosatelliteInstability #MSI #CancerGenomics #NextGenerationSequencing #ComputationalBiology #Genomics #PersonalizedMedicine #Oncology #Biomarkers #PrecisionMedicine

🔬 What if a tumor sample could serve as its own reference?

🔗 Reference-Free Microsatellite Instability Detection from Tumor Sequencing Using Intrasample Variability Modeling. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0219

📚 CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#MicrosatelliteInstability #MSI #CancerGenomics #NextGenerationSequencing #ComputationalBiology #Genomics #PersonalizedMedicine #Oncology #Biomarkers #PrecisionMedicine

🔬 What if a tumor sample could serve as its own reference?

🔗 Reference-Free Microsatellite Instability Detection from Tumor Sequencing Using Intrasample Variability Modeling. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0219

📚 CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#MicrosatelliteInstability #MSI #CancerGenomics #NextGenerationSequencing #ComputationalBiology #Genomics #PersonalizedMedicine #Oncology #Biomarkers #PrecisionMedicine

🔬 What if a tumor sample could serve as its own reference?

🔗 Reference-Free Microsatellite Instability Detection from Tumor Sequencing Using Intrasample Variability Modeling. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0219

📚 CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#MicrosatelliteInstability #MSI #CancerGenomics #NextGenerationSequencing #ComputationalBiology #Genomics #PersonalizedMedicine #Oncology #Biomarkers #PrecisionMedicine

⚛️ Would today’s antibiotics still work if bacterial biology were flipped at the molecular level?

🔗 Molecular Dynamics Simulations Demonstrate Reduced Antibiotic Affinity to Mirror Bacterial Targets. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0198

📚 CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#MolecularDynamics #Antibiotics #Biosecurity #ComputationalBiology #SyntheticBiology #DrugDiscovery #AntimicrobialResearch #ComputationalChemistry

⚛️ Would today’s antibiotics still work if bacterial biology were flipped at the molecular level?

🔗 Molecular Dynamics Simulations Demonstrate Reduced Antibiotic Affinity to Mirror Bacterial Targets. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0198

📚 CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#MolecularDynamics #Antibiotics #Biosecurity #ComputationalBiology #SyntheticBiology #DrugDiscovery #AntimicrobialResearch #ComputationalChemistry

📢 Call for Papers: AI for Real-World Evidence Generation in Biomedicine

⏳ Submission Deadline: 31 January 2027

🔗 Submit your work: https://spj.science.org/journal/csbj/si/ai-real-world-evidence-generation

#CallForPapers #RealWorldEvidence #RWE #ArtificialIntelligence #AIinHealthcare #BiomedicalAI #MachineLearning #ClinicalInformatics #ComputationalBiology #CausalAI #Multiomics #BiomarkerDiscovery #PrecisionMedicine #DigitalHealth #RegulatoryScience #BiomedicalResearch

📢 Call for Papers: AI for Real-World Evidence Generation in Biomedicine

⏳ Submission Deadline: 31 January 2027

🔗 Submit your work: https://spj.science.org/journal/csbj/si/ai-real-world-evidence-generation

#CallForPapers #RealWorldEvidence #RWE #ArtificialIntelligence #AIinHealthcare #BiomedicalAI #MachineLearning #ClinicalInformatics #ComputationalBiology #CausalAI #Multiomics #BiomarkerDiscovery #PrecisionMedicine #DigitalHealth #RegulatoryScience #BiomedicalResearch

📢 Call for Papers: AI for Real-World Evidence Generation in Biomedicine

⏳ Submission Deadline: 31 January 2027

🔗 Submit your work: https://spj.science.org/journal/csbj/si/ai-real-world-evidence-generation

#CallForPapers #RealWorldEvidence #RWE #ArtificialIntelligence #AIinHealthcare #BiomedicalAI #MachineLearning #ClinicalInformatics #ComputationalBiology #CausalAI #Multiomics #BiomarkerDiscovery #PrecisionMedicine #DigitalHealth #RegulatoryScience #BiomedicalResearch

📢 Call for Papers: AI for Real-World Evidence Generation in Biomedicine

⏳ Submission Deadline: 31 January 2027

🔗 Submit your work: https://spj.science.org/journal/csbj/si/ai-real-world-evidence-generation

#CallForPapers #RealWorldEvidence #RWE #ArtificialIntelligence #AIinHealthcare #BiomedicalAI #MachineLearning #ClinicalInformatics #ComputationalBiology #CausalAI #Multiomics #BiomarkerDiscovery #PrecisionMedicine #DigitalHealth #RegulatoryScience #BiomedicalResearch