#cellosaurus — Public Fediverse posts

Release 55 of #Cellosaurus is ready: https://www.cellosaurus.org
It contains information regarding 167'186 #celllines and cite 29'959 publications.

Release 54 of #Cellosaurus is ready: www.cellosaurus.org
It contains information regarding 167'127 #celllines and cite 29'935 publications.

Release 53 of #Cellosaurus is ready: https://www.cellosaurus.org/
It contains information regarding 165'949 #celllines and cite 29'655 publications. Author name representation has changed from listing the surname followed by initials to a full-name format that spells out the given name(s) in full

First talk of the day at #ISMBECCB2025, keynote from Amos Bairoch "Plus ça change, plus c'est la même chose: from #SwissProt to #Cellosaurus, 40 years of #biocuration" https://www.iscb.org/ismbeccb2025/programme-agenda/distinguished-keynotes#bairoch

💡 Want to make the most of cell line data? Join this #BC2Basel tutorial to explore Cellosaurus, from ontologies to APIs to real-world use cases.

🔹Taught by Amos Bairoch & Pierre-André Michel (SIB).

📅 Mon 8 Sep at #bc2

👉Register: tinyurl.com/5n8w3pwb

#bioinformatics #Cellosaurus #celllines #lifesciences #FAIRdata

💡 Want to make the most of cell line data? Join this #BC2Basel tutorial to explore Cellosaurus, from ontologies to APIs to real-world use cases.

🔹Taught by Amos Bairoch & Pierre-André Michel (SIB).

📅 Mon 8 Sep at #bc2

👉Register: tinyurl.com/5n8w3pwb

#bioinformatics #Cellosaurus #celllines #lifesciences #FAIRdata

💡 Want to make the most of cell line data? Join this #BC2Basel tutorial to explore Cellosaurus, from ontologies to APIs to real-world use cases.

🔹Taught by Amos Bairoch & Pierre-André Michel (SIB).

📅 Mon 8 Sep at #bc2

👉Register: tinyurl.com/5n8w3pwb

#bioinformatics #Cellosaurus #celllines #lifesciences #FAIRdata

💡 Want to make the most of cell line data? Join this #BC2Basel tutorial to explore Cellosaurus, from ontologies to APIs to real-world use cases.

🔹Taught by Amos Bairoch & Pierre-André Michel (SIB).

📅 Mon 8 Sep at #bc2

👉Register: tinyurl.com/5n8w3pwb

#bioinformatics #Cellosaurus #celllines #lifesciences #FAIRdata

💡 Want to make the most of cell line data? Join this #BC2Basel tutorial to explore Cellosaurus, from ontologies to APIs to real-world use cases.

🔹Taught by Amos Bairoch & Pierre-André Michel (SIB).

📅 Mon 8 Sep at #bc2

👉Register: tinyurl.com/5n8w3pwb

#bioinformatics #Cellosaurus #celllines #lifesciences #FAIRdata

Release 52 of #Cellosaurus is ready: https://cellosaurus.org
It contains information regarding 163'868 #celllines and cite 29'267 publications.

Release 51 of #Cellosaurus is ready: https://cellosaurus.org
It contains information regarding 161'202 #celllines and cite 28'637 publications.

See our Linkedin post on how the #Cellosaurus now cross-reference to FPBase to indicate the fluorescent protein(s) integrated in a #cellline: https://www.linkedin.com/posts/cellosaurus-knowledge-resource_fpbase-the-fluorescent-protein-database-activity-7252433521607077888-GOkD

Leonard Hayflick, renowned for his groundbreaking discovery of the Hayflick limit, passed away on August 1 at the age of 96.
See our post on the #Cellosaurus page on LinkedIn: https://linkedin.com/posts/cellosaurus-knowledge-resource_death-of-leonard-hayflick-leonard-hayflick-activity-7247656339609387011-_y_D?utm_source=share&utm_medium=member_desktop

Release 50 of #Cellosaurus is ready: https://www.cellosaurus.org It contains information regarding 159461 #celllines and cite 28313 publications.
Highlights of this release: complete reannotation of genetic integration (formerly "transfected") field.

First LinkedIn post in a series of scientists cited in #Cellosaurus that also moonlight as artists or musicians (#cellosaurus_artmus): https://linkedin.com/feed/update/urn:li:activity:7211301926733234176

A new #Cellosaurus "group" comment was introduced a few months ago: "Malaria research cell line". It allows to efficently retrieve the list of #celllines useful for the study of this disease: https://www.cellosaurus.org/search?query=%22Malaria%20research%20cell%20line%22

The Parkinson's Progression Markers Initiative (PPMI) (https://www.ppmi-info.org/)
has submitted to the #Cellosaurus information regarding 386 iPSCs that are highly important for the study of Parkinson’s onset and progression. You can search for these #celllines using the following query pattern: https://www.cellosaurus.org/search?query=%22(PPMI)%22

Release 49 of #Cellosaurus is ready https://cellosaurus.org It contains information regarding 153642 #celllines and cite 27882 publications. Highlights of this release: introduction of plant #celllines, improvements to the XML format.

Release 48 of #Cellosaurus contains an entry https://cellosaurus.org/CVCL_D4A4 for the first sponge #cellline which was recently established from Geodia barretti (see image from Wikipedia) https://nature.com/articles/s41598-023-32394-x

The #Cellosaurus files are growing bigger at each release & we are now past the file size limit (100 Mb) of GitHub. Thus we will no longer update the Cellosaurus on that platform. Users that want access to old releases can do so on @Yareta_UNIGE
https://yareta.unige.ch/home/search?search=search%3Dcellosaurus

Release 48 of #Cellosaurus is ready https://cellosaurus.org It contains information regarding 152231 #celllines and cite 27418 publications. Highlights of this release: new cross-references to BioGRID_ORCS and DSHB.

@ECACC has a new version of its web site and its #celllines product pages now include links to the #Cellosaurus Example: https://www.culturecollections.org.uk/nop/product/1411h A big thank you!

The #Cellosaurus wishes all its users a very happy end of year holiday season (Image credit: DALL·E 3).

Today, we have reached an important milestone: 150,000 #celllines entries in the #Cellosaurus
Who will be the 1st one to guess the meaning of the color stripes in the illustration below?

After English and German, there is now an entry on the #Cellosaurus in the Czech Wikipedia: https://cs.wikipedia.org/wiki/Cellosaurus

Release 47 of #Cellosaurus is ready https://cellosaurus.org It contains information regarding 148681 #celllines and cite 26994 publications. Highlight of this release: new cross-references to cancercelllines.org, GeneCopoeia and Ubigene

Release 46 of #Cellosaurus is ready https://cellosaurus.org It contains information regarding 146062 #celllines and cite 26479 publications. Highlight of this release: enhancement of info on anatomical origin (tissues/organs) and cell type of cell lines.

The #Cellosaurus paper https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5945021/ has reached over 400 citations. Thank you for citing this paper when using the resource

A very significant milestone for the #Cellosaurus: there are now 10,000 papers that have cited one or more Cellosaurus #cellline Research Resource Identifiers (#RRID)

A very significant milestone for the #Cellosaurus: there are now 10,000 papers that have cited one or more Cellosaurus #cellline Research Resource Identifiers (#RRID)

A very significant milestone for the #Cellosaurus: there are now 10,000 papers that have cited one or more Cellosaurus #cellline Research Resource Identifiers (#RRID)

A very significant milestone for the #Cellosaurus: there are now 10,000 papers that have cited one or more Cellosaurus #cellline Research Resource Identifiers (#RRID)

A very significant milestone for the #Cellosaurus: there are now 10,000 papers that have cited one or more Cellosaurus #cellline Research Resource Identifiers (#RRID)

Release 45 of #Cellosaurus is ready https://cellosaurus.org It contains information regarding 145368 #celllines and cite 26279 publications. #celllines #bioinformatics #biocuration

Today in the #Cellosaurus we have reached 4000 different sequence variations linked to #ClinVar or #dbSNP There are an additional 2450 variants not linked to these two resources. Globally these variations concern 1100 different human genes.

The #Cellosaurus site (https://www.cellosaurus.org/) underwent a facelift: it is still tuned to be as efficient and effective as possible in providing information but now includes a menu bar and is adapted to smaller screens (phones and tablets).

There is a nice blog entry describing the #Cellosaurus on the #Addgene blog: https://blog.addgene.org/cellosaurus-a-cell-line-information-database

In a recent review on insect #celllines (https://www.mdpi.com/2075-4450/14/2/104#B16-insects-14-00104) there is a graphical analysis of the proportion of different insect orders contributing to #Cellosaurus insect cell lines. Not suprisingly lepidoptera and diptera contribute for over 91% of these cell lines

Kondo's group continues to develop #celllines for rare sarcomas (will be CVCL_C7G0 in next #Cellosaurus release): Establishment and characterization of NCC-DSM1-C1: a novel cell line derived from a patient with desmoid fibromatosis https://pubmed.ncbi.nlm.nih.gov/36629983/

I asked ChatGPT to create a mission statement for #Cellosaurus. What it came up with is so good that I am both awed and scared by the power of such language models! #AI #cellline

The #Cellosaurus wishes all of its users an happy new year. #celllines #happy2023

In addition to the "Virology" field, two new comment fields were introduced in #Cellosaurus Rel.44: "Senescence" and "Donor information". Example: https://www.cellosaurus.org/CVCL_ZT99 #cellline

Release 44 of #Cellosaurus is ready https://cellosaurus.org It contains information regarding 144568 #celllines and cite 25963 publications. Since last release (Sep 22) 2689 entries were created and 11206 updated.