#cancergenomics — Public Fediverse posts

🔬 What if a tumor sample could serve as its own reference?

🔗 Reference-Free Microsatellite Instability Detection from Tumor Sequencing Using Intrasample Variability Modeling. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0219

📚 CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#MicrosatelliteInstability #MSI #CancerGenomics #NextGenerationSequencing #ComputationalBiology #Genomics #PersonalizedMedicine #Oncology #Biomarkers #PrecisionMedicine

Postdoctoral Fellow in Computational Biology
Temple University

See the full job description on jobRxiv: https://jobrxiv.org/job/temple-university-27778-postdoctoral-fellow-in-computational-biology/

#BioinformaticsandComputationalBiology #cancergenomics #epigenomics #singlecellomics #spatialomics #ScienceJobs #hiring #research
https://jobrxiv.org/job/temple-university-27778-postdoctoral-fellow-in-computational-biology/?fsp_sid=15066

Translational Cancer Science Research Fellow  
Weill Cornell Medicine

See the full job description on jobRxiv: https://jobrxiv.org/job/weill-cornell-medicine-27778-translational-cancer-science-research-fellow/

#CancerEpigenetics #cancergenomics #cancerimmunology #diseasemechanism #Translationalmedicine #ScienceJobs #hiring #research
https://jobrxiv.org/job/weill-cornell-medicine-27778-translational-cancer-science-research-fellow/?fsp_sid=15052

Copy-Number Signature Architecture of Chromosomal Instability

#CancerGenomics #ChromosomalInstability #CopyNumberSignatures #MutationalSignatures #GenomeInstability #ComputationalOncology #Bioinformatics #DataVisualization

https://www.europesays.com/ie/599430/ Brown bullhead catfish melanoma represents a novel transmissible cancer #CancerGenomics #Éire #Health #HumanitiesAndSocialSciences #IE #InfectiousDiseases #Ireland #MolecularEvolution #multidisciplinary #Science

https://www.europesays.com/news/55598/ Brown bullhead catfish melanoma represents a novel transmissible cancer #CancerGenomics #Headlines #HumanitiesAndSocialSciences #InfectiousDiseases #MolecularEvolution #multidisciplinary #News #Science #TopStories

https://www.europesays.com/uk/1019868/ A prognostic human brain network for diffuse midline glioma #CancerGenomics #CancerImaging #CancerInTheNervousSystem #CNSCancer #Health #HumanitiesAndSocialSciences #multidisciplinary #PaediatricCancer #Science #UK #UnitedKingdom

Postdoctoral Fellow in Computational Biology
Temple University

See the full job description on jobRxiv: https://jobrxiv.org/job/temple-university-27778-postdoctoral-fellow-in-computational-biology/

#BioinformaticsandComputationalBiology #cancergenomics #epigenomics #singlecellomics #spatialomics #ScienceJobs #hiring #research
https://jobrxiv.org/job/temple-university-27778-postdoctoral-fellow-in-computational-biology/?fsp_sid=12613

https://www.europesays.com/uk/880640/ Implementing whole genome and transcriptome sequencing for cancer patients in routine healthcare: a comprehensive guide to costing #Biomedicine #CancerGenomics #CancerResearch #DrugResistance #Epidemiology #general #Health #Healthcare #MolecularMedicine #oncology #TumourBiomarkers #UK #UnitedKingdom

https://www.europesays.com/ie/425770/ Implementing whole genome and transcriptome sequencing for cancer patients in routine healthcare: a comprehensive guide to costing #Biomedicine #CancerGenomics #CancerResearch #DrugResistance #Éire #Epidemiology #general #Health #HealthCare #Healthcare #IE #Ireland #MolecularMedicine #oncology #TumourBiomarkers

Implementing whole genome and transcriptome sequencing for cancer patients in routine healthcare: a comprehensive guide to costing

Kazdal D, Endris V, Allgauer M, Kriegsmann M, Leichsenring J, Volckmar AL, et al. Spatial and temporal heterogeneity…
#NewsBeep #News #Healthcare #AU #Australia #Biomedicine #Cancergenomics #CancerResearch #DrugResistance #epidemiology #general #Health #MolecularMedicine #oncology #Tumourbiomarkers
https://www.newsbeep.com/au/593049/

📊 Bioinformatics - Jan 2025

• Population-scale modeling maps the tumor immune microenvironment
• RNA–small molecule prediction advances structure-free drug discovery
• Improved microbiome analytics refine association testing

https://pir.sh/9OxdzbYdBl

#Bioinformatics #CancerGenomics #SystemsBiology

RNACOREX Opens the Black Box of Cancer Gene Networks

https://techlife.blog/posts/a-new-tool-is-revealing-the-invisible-networks-inside-cancer/

#Science #Cancer #Research #CancerResearch #Bioinformatics #CancerGenomics

Postdoctoral Position – Arango Lab
Department of Pharmacology. Feinberg School of Medicine. Northwestern University

See the full job description on jobRxiv: https://jobrxiv.org/job/department-of-pharmacology-feinberg-school-of-medicine-northwestern-university-27778-postdoctoral-position-arango-lab/

#cancergenomics #mrnatranslation #rnab...
https://jobrxiv.org/job/department-of-pharmacology-feinberg-school-of-medicine-northwestern-university-27778-postdoctoral-position-arango-lab/?fsp_sid=6185

Post-Doctoral Research Fellow - Leek Lab
Fred Hutchinson Cancer Center

See the full job description on jobRxiv: https://jobrxiv.org/job/fred-hutchinson-cancer-center-27778-post-doctoral-research-fellow-leek-lab/

#biostatistics #cancergenomics #epidemiology #oncology #postdoctoral #ScienceJobs #hiring #research
https://jobrxiv.org/job/fred-hutchinson-cancer-center-27778-post-doctoral-research-fellow-leek-lab/?fsp_sid=6066

Assistant, Associate, or Full Professor, Ludwig Princeton Branch
Princeton University

See the full job description on jobRxiv: https://jobrxiv.org/job/princeton-university-27778-assistant-associate-or-full-professor-ludwig-princeton-branch-2/

#cancer #cancerbiology #cancergenomics #Cancermetabolism #cancerresearch #ScienceJobs #hiring #research
https://jobrxiv.org/job/princeton-university-27778-assistant-associate-or-full-professor-ludwig-princeton-branch-2/?fsp_sid=4246

Post-Doctoral Research Fellow - Leek Lab
Fred Hutchinson Cancer Center

See the full job description on jobRxiv: https://jobrxiv.org/job/fred-hutchinson-cancer-center-27778-post-doctoral-research-fellow-leek-lab/

#biostatistics #cancergenomics #epidemiology #oncology #postdoctoral #ScienceJobs #hiring #research
https://jobrxiv.org/job/fred-hutchinson-cancer-center-27778-post-doctoral-research-fellow-leek-lab/?fsp_sid=3896

Postdoctoral Position – Arango Lab
Department of Pharmacology. Feinberg School of Medicine. Northwestern University

See the full job description on jobRxiv: https://jobrxiv.org/job/department-of-pharmacology-feinberg-school-of-medicine-northwestern-university-27778-postdoctoral-position-arango-lab/

#cancergenomics #mrnatranslation #rnab...
https://jobrxiv.org/job/department-of-pharmacology-feinberg-school-of-medicine-northwestern-university-27778-postdoctoral-position-arango-lab/?fsp_sid=3735

https://www.europesays.com/uk/484618/ Sex and smoking bias in the selection of somatic mutations in human bladder #CancerEpidemiology #CancerGenomics #GenomeInformatics #Health #HumanitiesAndSocialSciences #multidisciplinary #Science #UK #UnitedKingdom #UrologicalCancer

Somatic mutation and selection at population scale

Cohort selection The TwinsUK study contains around 16,000 participants. From a preselection of 4,800 donors, we invited 1,796…
#NewsBeep #News #US #USA #UnitedStates #UnitedStatesOfAmerica #Genetics #Cancerepidemiology #Cancergenomics #dnasequencing #HumanitiesandSocialSciences #Molecularevolution #multidisciplinary #Mutation #Science
https://www.newsbeep.com/us/210388/

https://www.europesays.com/uk/483765/ Somatic mutation and selection at population scale #CancerEpidemiology #CancerGenomics #DNASequencing #Health #HumanitiesAndSocialSciences #MolecularEvolution #multidisciplinary #Mutation #Science #UK #UnitedKingdom

Tracking clonal evolution during treatment in ovarian cancer using cell-free DNA

Sample collection All enrolled patients were consented to an institutional biospecimen banking protocol and MSK-IMPACT testing42, and all…
#NewsBeep #News #Health #Cancergenomics #Cancertherapy #GB #HumanitiesandSocialSciences #multidisciplinary #Ovariancancer #Science #Tumourheterogeneity #UK #UnitedKingdom
https://www.newsbeep.com/uk/174044/

Postdoctoral Position – Arango Lab
Department of Pharmacology. Feinberg School of Medicine. Northwestern University

See the full job description on jobRxiv: https://jobrxiv.org/job/department-of-pharmacology-feinberg-school-of-medicine-northwestern-university-27778-postdoctoral-position-arango-lab/

#cancergenomics #mrnatranslation #rnab...
https://jobrxiv.org/job/department-of-pharmacology-feinberg-school-of-medicine-northwestern-university-27778-postdoctoral-position-arango-lab/?fsp_sid=2916

Assistant, Associate, or Full Professor, Ludwig Princeton Branch
Princeton University

See the full job description on jobRxiv: https://jobrxiv.org/job/princeton-university-27778-assistant-associate-or-full-professor-ludwig-princeton-branch-2/

#cancer #cancerbiology #cancergenomics #Cancermetabolism #cancerresearch #ScienceJobs #hiring #research
https://jobrxiv.org/job/princeton-university-27778-assistant-associate-or-full-professor-ludwig-princeton-branch-2/?fsp_sid=2650

Post-Doctoral Research Fellow - Leek Lab
Fred Hutchinson Cancer Center

See the full job description on jobRxiv: https://jobrxiv.org/job/fred-hutchinson-cancer-center-27778-post-doctoral-research-fellow-leek-lab/

#biostatistics #cancergenomics #epidemiology #oncology #postdoctoral #ScienceJobs #hiring #research
https://jobrxiv.org/job/fred-hutchinson-cancer-center-27778-post-doctoral-research-fellow-leek-lab/?fsp_sid=2356

Development and extensive sequencing of a broadly-consented Genome in a Bottle matched tumor-normal pair

PacBio Revio HiFiPCR-free Revio HiFi Sequencing (Dataset ID: PB-HiFi-1) Library Preparation Library preparation was performed using previously isolated…
#NewsBeep #News #Genetics #CA #Canada #Cancergenomics #Genomeinformatics #HumanitiesandSocialSciences #multidisciplinary #Science
https://www.newsbeep.com/ca/127479/

Development and extensive sequencing of a broadly-consented Genome in a Bottle matched tumor-normal pair

PacBio Revio HiFiPCR-free Revio HiFi Sequencing (Dataset ID: PB-HiFi-1) Library Preparation Library preparation was performed using previously isolated…
#NewsBeep #News #Genetics #Cancergenomics #Genomeinformatics #HumanitiesandSocialSciences #multidisciplinary #Science #UK #UnitedKingdom
https://www.newsbeep.com/uk/121619/

Post-Doctoral Research Fellow - Leek Lab
Fred Hutchinson Cancer Center

See the full job description on jobRxiv: https://jobrxiv.org/job/fred-hutchinson-cancer-center-27778-post-doctoral-research-fellow-leek-lab/

#biostatistics #cancergenomics #epidemiology #oncology #postdoctoral #ScienceJobs #hiring #research
https://jobrxiv.org/job/fred-hutchinson-cancer-center-27778-post-doctoral-research-fellow-leek-lab/?fsp_sid=2020

Assistant, Associate, or Full Professor, Ludwig Princeton Branch
Princeton University

See the full job description on jobRxiv: https://jobrxiv.org/job/princeton-university-27778-assistant-associate-or-full-professor-ludwig-princeton-branch-2/

#cancer #cancerbiology #cancergenomics #Cancermetabolism #cancerresearch #ScienceJobs #hiring #research
https://jobrxiv.org/job/princeton-university-27778-assistant-associate-or-full-professor-ludwig-princeton-branch-2/?fsp_sid=1880

Post-Doctoral Research Fellow - Leek Lab
Fred Hutchinson Cancer Center

See the full job description on jobRxiv: https://jobrxiv.org/job/fred-hutchinson-cancer-center-27778-post-doctoral-research-fellow-leek-lab/

#biostatistics #cancergenomics #epidemiology #oncology #postdoctoral #ScienceJobs #hiring #research
https://jobrxiv.org/job/fred-hutchinson-cancer-center-27778-post-doctoral-research-fellow-leek-lab/?fsp_sid=1698

Assistant, Associate, or Full Professor, Ludwig Princeton Branch
Princeton University

See the full job description on jobRxiv: https://jobrxiv.org/job/princeton-university-27778-assistant-associate-or-full-professor-ludwig-princeton-branch-2/

#cancer #cancerbiology #cancergenomics #Cancermetabolism #cancerresearch #ScienceJobs #hiring #research
https://jobrxiv.org/job/princeton-university-27778-assistant-associate-or-full-professor-ludwig-princeton-branch-2/?fsp_sid=942

Integrated multi-omics analysis reveals the molecular interplay between circadian clocks and cancer pathogenesis. https://doi.org/10.1038/s41598-023-39401-1 #CancerGenomics #Biomarkers #DataIntegration

The proteomic landscape of soft tissue sarcomas. https://doi.org/10.1038/s41467-023-39486-2 #Sarcoma #ProteomicAnalysis #CancerGenomics #TumourBiomarkers

A big thank you to the trainers and the participants of this great course!

🔗If you want to join one of the upcoming courses, please check this out: https://physalia-courses.org/courses-workshops/

#CancerGenomics #Rstats #Bioinformatics #Genomics

Estimation of activity changes for >500 kinases & transcription factors in >1,000 cancer samples & cell lines identifies drivers of signalling dysregulation & patient survival ➡️ https://www.embopress.org/doi/full/10.15252/msb.202110631
@pedrobeltrao IMSB ETH
@saezlab UniHeidelberg
@Epetsalaki EMBL-EBI
#CancerGenomics #Genomics #Phosphoproteomics #SystemsBiology

⏳There are still a few seats available for some of our courses in January.

🔗https://physalia-courses.org/courses-workshops/

#RShiny #Rstats #Unix #Bioinformatics #FlowCytometry #Programming #SexChromosome #CancerGenomics #GeneSetEnrichment

Interested in Gene Set Enrichment in R? Have a look at our new course with Dr. Zuguang Gu

If interested, please check it out: https://physalia-courses.org/courses-workshops/gse-in-r/

#Rstats #Genomics #bioconductor #DataScience #Bioinformatics #datavisualization #GSEA #CancerGenomics

There are only a few seats left for the ANALYSIS OF CANCER GENOMES USING R AND BIOINFORMATIC TOOLS course. This course is aimed at researchers who are planning to apply high-throughput sequencing in cancer research

https://physalia-courses.org/courses-workshops/cancer-genomics/

#CancerGenomics #Bioinformatics #RStats