#bgee — Public Fediverse posts

We are excited to announce a new training course on Bgee 🧬
Course: Gene Expression made Useful Easily: Tools and Database of Bgee
Date: Friday 29 May 2026
Taught by: the Bgee team (Frédéric Bastian and Marc Robinson-Rechavi)
Learn more: https://www.sib.swiss/training/course/20260529_BGEEL
#bioinformatics #training #RNAseq #singlecell #GeneExpression #bgee
@SIB @marcrr @fbastian

We are excited to announce a new training course on Bgee 🧬
Course: Gene Expression made Useful Easily: Tools and Database of Bgee
Date: Friday 29 May 2026
Taught by: the Bgee team (Frédéric Bastian and Marc Robinson-Rechavi)
Learn more: https://www.sib.swiss/training/course/20260529_BGEEL
#bioinformatics #training #RNAseq #singlecell #GeneExpression #bgee
@SIB @marcrr @fbastian

Coming to #biocuration2025? Join our workshop scFAIR: FAIRification of single-cell data https://www.stowers.org/events/biocuration2025 @SIB @biocurator @marcrr @fbastian
#scRNAseq #FAIR #biocuration #bgee #FAIRdata #FAIRification #scFAIR #SingleCellAnalysis https://sc-fair.org/

Coming to #biocuration2025? Join our workshop scFAIR: FAIRification of single-cell data https://www.stowers.org/events/biocuration2025 @SIB @biocurator @marcrr @fbastian
#scRNAseq #FAIR #biocuration #bgee #FAIRdata #FAIRification #scFAIR #SingleCellAnalysis https://sc-fair.org/

Do you know gget by the Pachter lab? You should! It now includes efficient querying of Bgee in Python. Get high quality curated gene expression data directly in Python or command line. https://pachterlab.github.io/gget/en/bgee.html #RNAseq #biocuration #Python #scRNAseq @SIB @marcrr @fbastian @dee_unil

#bgee #Bioinformatics #RNASequencing #SingleCellRNASeq #Genomics #Transcriptomics #GeneExpression #ComputationalBiology #SingleCellAnalysis #GeneExpressionAnalysis

Do you know gget by the Pachter lab? You should! It now includes efficient querying of Bgee in Python. Get high quality curated gene expression data directly in Python or command line. https://pachterlab.github.io/gget/en/bgee.html #RNAseq #biocuration #Python #scRNAseq @SIB @marcrr @fbastian @dee_unil

#bgee #Bioinformatics #RNASequencing #SingleCellRNASeq #Genomics #Transcriptomics #GeneExpression #ComputationalBiology #SingleCellAnalysis #GeneExpressionAnalysis

Bgee has a new look! We have officially switched to the new Bgee website. Check us out at https://www.bgee.org/ @SIB #scRNAseq #RNAseq #singlecell #GeneExpression #bgee #biocuration #bioinformatics

Bgee has a new look! We have officially switched to the new Bgee website. Check us out at https://www.bgee.org/ @SIB #scRNAseq #RNAseq #singlecell #GeneExpression #bgee #biocuration #bioinformatics

We are excited to announce a new training course on Bgee 🧬
Course: Gene Expression made Useful Easily: Tools and Database of Bgee
Date: Friday 31 May 2024
Taught by: the Bgee team (Frédéric Bastian and Marc Robinson-Rechavi)
Apply at: https://sib.swiss/training/course/20240531_BGEEL
#bioinformatics #training #RNAseq #singlecell #GeneExpression #bgee

We are excited to announce a new training course on Bgee 🧬
Course: Gene Expression made Useful Easily: Tools and Database of Bgee
Date: Friday 31 May 2024
Taught by: the Bgee team (Frédéric Bastian and Marc Robinson-Rechavi)
Apply at: https://sib.swiss/training/course/20240531_BGEEL
#bioinformatics #training #RNAseq #singlecell #GeneExpression #bgee

I am looking for an #ontology #schema that I can use to mark up where #sparql example is known to work. e.g. a query that works for #uniprot and #bgee or #omabrowser. Please share for reach.

I am looking for an #ontology #schema that I can use to mark up where #sparql example is known to work. e.g. a query that works for #uniprot and #bgee or #omabrowser. Please share for reach.

#SIB Preprint on the power and limitations of #AI #chatbots such as #chatgpt to understand #SPARQL federated queries over #UniProt, #OMA and #Bgee https://arxiv.org/abs/2304.10427

#SIB Preprint on the power and limitations of #AI #chatbots such as #chatgpt to understand #SPARQL federated queries over #UniProt, #OMA and #Bgee https://arxiv.org/abs/2304.10427

Did you know you can retrieve annotation and gene expression data from #Bgee and perform #TopAnat analyses in #BioContainers? It's the fashionable way to access curated #GeneExpression 😎
https://biocontainers.pro/tools/bioconductor-bgeedb
#BioConda #Singularity #Docker #bioinformatics #biocuration #RNAseq #microarrays #UberAnat #SIB

Did you know you can retrieve annotation and gene expression data from #Bgee and perform #TopAnat analyses in #BioContainers? It's the fashionable way to access curated #GeneExpression 😎
https://biocontainers.pro/tools/bioconductor-bgeedb
#BioConda #Singularity #Docker #bioinformatics #biocuration #RNAseq #microarrays #UberAnat #SIB