#basecalling — Public Fediverse posts
Live and recent posts from across the Fediverse tagged #basecalling, aggregated by home.social.
-
Basecalling on RTX 3060, dorado's ram usage never goes above 8GB~ on 12GB GPU. What are the chances the memory usage is specifically tuned for 8GB range to account for majority of consumer level GPUs out there?
I wonder if I can manually tinker to improve performance here.
-
Basecalling on RTX 3060, dorado's ram usage never goes above 8GB~ on 12GB GPU. What are the chances the memory usage is specifically tuned for 8GB range to account for majority of consumer level GPUs out there?
I wonder if I can manually tinker to improve performance here.
-
Basecalling on RTX 3060, dorado's ram usage never goes above 8GB~ on 12GB GPU. What are the chances the memory usage is specifically tuned for 8GB range to account for majority of consumer level GPUs out there?
I wonder if I can manually tinker to improve performance here.
-
Basecalling on RTX 3060, dorado's ram usage never goes above 8GB~ on 12GB GPU. What are the chances the memory usage is specifically tuned for 8GB range to account for majority of consumer level GPUs out there?
I wonder if I can manually tinker to improve performance here.
-
Basecalling on RTX 3060, dorado's ram usage never goes above 8GB~ on 12GB GPU. What are the chances the memory usage is specifically tuned for 8GB range to account for majority of consumer level GPUs out there?
I wonder if I can manually tinker to improve performance here.
-
Can you imagine calling #m6A modifications from raw #RNA #nanopore reads just with #basecalling?
Let me introduce you to #m6ABasecaller
-
Can you imagine calling #m6A modifications from raw #RNA #nanopore reads just with #basecalling?
Let me introduce you to #m6ABasecaller
-
Can you imagine calling #m6A modifications from raw #RNA #nanopore reads just with #basecalling?
Let me introduce you to #m6ABasecaller
-
Can you imagine calling #m6A modifications from raw #RNA #nanopore reads just with #basecalling?
Let me introduce you to #m6ABasecaller
-
Can you imagine calling #m6A modifications from raw #RNA #nanopore reads just with #basecalling?
Let me introduce you to #m6ABasecaller
-
A release note for #bioinformatics #basecalling fans! We've released wf-basecalling: wrapping the experimental #nanopore #Dorado caller in an easy to use #nextflow pipeline, and incorporated it into wf-human-variation 0.4.0 for an end-to-end base calls to variant calls workflow!
https://labs.epi2me.io/epi2me-labs-22.11.01-release/ -
A release note for #bioinformatics #basecalling fans! We've released wf-basecalling: wrapping the experimental #nanopore #Dorado caller in an easy to use #nextflow pipeline, and incorporated it into wf-human-variation 0.4.0 for an end-to-end base calls to variant calls workflow!
https://labs.epi2me.io/epi2me-labs-22.11.01-release/ -
A release note for #bioinformatics #basecalling fans! We've released wf-basecalling: wrapping the experimental #nanopore #Dorado caller in an easy to use #nextflow pipeline, and incorporated it into wf-human-variation 0.4.0 for an end-to-end bases to variants workflow!
https://labs.epi2me.io/epi2me-labs-22.11.01-release/ -
A release note for #bioinformatics #basecalling fans! We've released wf-basecalling: wrapping the experimental #nanopore #Dorado caller in an easy to use #nextflow pipeline, and incorporated it into wf-human-variation 0.4.0 for an end-to-end base calls to variant calls workflow!
https://labs.epi2me.io/epi2me-labs-22.11.01-release/ -
@benjaminv Should've tagged #gpu #resources #nanopore #basecalling as well ;) This looks interesting, going to check it out -- thanks!
-
@benjaminv Should've tagged #gpu #resources #nanopore #basecalling as well ;) This looks interesting, going to check it out -- thanks!