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10 results for “SjorsScheres”
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This is fantastic to hear! 🥳 The next version, #ModelAngelo 1.0, will be even better at this than the current version.
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RT @Kaelberviridae
@SjorsScheres @jamaliki1998 We recently discovered a novel virus by cryoEM. Although we figured out its relatives by manual inspection of the map, today we retrospectively analyzed it with #ModelAngelo and indeed this was as effective as next-gen sequencing in determining the closest relative
https://twitter.com/Kaelberviridae/status/1630331496405008384 -
#OpenSoftwareAcceleratesScience! 😍
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RT @ribo_rob
Happy to share @cryocloud_io's first blog article & benchmark! Huge thanks to @SjorsScheres for making #Relion #opensource, & @RadoDanev for uploading the data to #Empiar - this would not have been possible otherwise!
#cryoEM #cloudcomputing https://twitter.com/cryocloud_io/status/1621094105492369408
https://twitter.com/ribo_rob/status/1621094951596564480 -
Ok, let's try this out. An also on Twitter @SjorsScheres, but worried about recent developments there, and liking the #opensource and distributed nature of Mastodon. Do have a look at our own open software #RELION (relion.readthedocs.io) for #cryoEM structure determination of proteins.
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Finally got around to trying #modelangelo - wow.
Three chains build into a boxed asymmetric unit of a virus capsid resolved to 2.5 angstroms. Some minor tinkering to get to a pretty comprehensive and accurate model ready for refinement - and fast. Thanks @SjorsScheres -
And below shows the improvement in the reconstruction (coloured per local resolution) from standard #RELION (left) to Johannes' method (right).
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We plan to include this functionality in #RELION-4.1, with its beta-release scheduled for mid-2023. At the moment, we are writing a paper describing the method in detail and are working hard on making the code as easy to use and install as you are used to.
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By @jgreener64 and @jamaliki1998 (also #ModelAngelo): fast protein searches using graph embeddings! 🥳
https://www.biorxiv.org/content/10.1101/2022.11.28.518224v1 -
Just a reminder for those struggling with #amyloid reconstruction in #relion that we recently wrote a tutorial-like paper on this in @Faraday_D, which comes with publicly available data sets at @EMDB_EMPIAR.
https://pubs.rsc.org/en/content/articlelanding/2022/FD/D2FD00034B
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A fantastic recognition of these amazing scientists' contributions! 🥳
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RT @MRC_LMB
Congratulations to @KellyTHD_Nguyen, @bwfalcon and LMB alumni, @BolandLab_GE and @M_Hospenthal, for being elected @EMBO_YIP!Read the full news story here: https://www2.mrc-lmb.cam.ac.uk/embo-announces-2023-elections-for-young-investigator-programme/
#LMBNews #LMBAlumni #telomeres #DNAreplication #neurodegenerative #diseases
https://twitter.com/MRC_LMB/status/1595060285261373443